RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 MED14O60244 1454 aa18.91■□□□□ 0.62
VEGFA-224ENST00000523873 PPLO60437 1756 aa18.91■□□□□ 0.62
VEGFA-224ENST00000523873 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
VEGFA-224ENST00000523873 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
VEGFA-224ENST00000523873 NEXMIFQ5QGS0 1516 aa18.9■□□□□ 0.62
VEGFA-224ENST00000523873 ZNF326Q5BKZ1 582 aaKnown RBP18.89■□□□□ 0.61
VEGFA-224ENST00000523873 EID1Q9Y6B2 187 aa18.89■□□□□ 0.61
VEGFA-224ENST00000523873 ANKRD30BQ9BXX2 1392 aa18.88■□□□□ 0.61
VEGFA-224ENST00000523873 IFT172Q9UG01 1749 aa18.88■□□□□ 0.61
VEGFA-224ENST00000523873 STRCP1A6NGW2 1772 aa18.87■□□□□ 0.61
VEGFA-224ENST00000523873 SPATA31E1Q6ZUB1 1445 aa18.84■□□□□ 0.61
VEGFA-224ENST00000523873 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-224ENST00000523873 DHX57Q6P158 1386 aaKnown RBP18.83■□□□□ 0.61
VEGFA-224ENST00000523873 ZNF335Q9H4Z2 1342 aaPredicted RBP18.83■□□□□ 0.61
VEGFA-224ENST00000523873 NRXN3Q9Y4C0 1643 aa18.83■□□□□ 0.61
VEGFA-224ENST00000523873 RGL3Q3MIN7 710 aa18.82■□□□□ 0.6
VEGFA-224ENST00000523873 BCANQ96GW7 911 aa18.82■□□□□ 0.6
VEGFA-224ENST00000523873 LTBP4Q8N2S1 1624 aa18.82■□□□□ 0.6
VEGFA-224ENST00000523873 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
VEGFA-224ENST00000523873 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.81■□□□□ 0.6
VEGFA-224ENST00000523873 HDGFP51858 240 aaKnown RBP18.8■□□□□ 0.6
VEGFA-224ENST00000523873 SLC26A8Q96RN1 970 aa18.8■□□□□ 0.6
VEGFA-224ENST00000523873 CHD2O14647 1828 aaKnown RBP18.78■□□□□ 0.6
VEGFA-224ENST00000523873 ADAMTS13Q76LX8 1427 aa18.77■□□□□ 0.6
VEGFA-224ENST00000523873 SETD1AO15047 1707 aaKnown RBP18.77■□□□□ 0.59
VEGFA-224ENST00000523873 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
VEGFA-224ENST00000523873 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
VEGFA-224ENST00000523873 XIRP1Q702N8 1843 aaKnown RBP18.74■□□□□ 0.59
VEGFA-224ENST00000523873 DIP2AQ14689 1571 aa18.73■□□□□ 0.59
VEGFA-224ENST00000523873 SIN3AQ96ST3 1273 aa18.73■□□□□ 0.59
VEGFA-224ENST00000523873 ADGRF5Q8IZF2 1346 aa18.73■□□□□ 0.59
VEGFA-224ENST00000523873 NWD1Q149M9 1564 aa18.71■□□□□ 0.59
VEGFA-224ENST00000523873 ALKQ9UM73 1620 aa18.71■□□□□ 0.58
VEGFA-224ENST00000523873 VGFO15240 615 aaPredicted RBP18.7■□□□□ 0.58
VEGFA-224ENST00000523873 CPS1P31327 1500 aa18.69■□□□□ 0.58
VEGFA-224ENST00000523873 CERKQ8TCT0 537 aa18.69■□□□□ 0.58
VEGFA-224ENST00000523873 NEUROD1Q13562 356 aa18.68■□□□□ 0.58
VEGFA-224ENST00000523873 TBX22Q9Y458 520 aa18.68■□□□□ 0.58
VEGFA-224ENST00000523873 MYOM2P54296 1465 aa18.68■□□□□ 0.58
VEGFA-224ENST00000523873 PTPRUQ92729 1446 aa18.67■□□□□ 0.58
VEGFA-224ENST00000523873 METP08581 1390 aa18.67■□□□□ 0.58
VEGFA-224ENST00000523873 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
VEGFA-224ENST00000523873 LRRC7Q96NW7 1537 aa18.66■□□□□ 0.58
VEGFA-224ENST00000523873 KDM2AQ9Y2K7 1162 aa18.66■□□□□ 0.58
VEGFA-224ENST00000523873 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
VEGFA-224ENST00000523873 NRXN1Q9ULB1 1477 aa18.65■□□□□ 0.58
VEGFA-224ENST00000523873 KCNA6P17658 529 aa18.65■□□□□ 0.58
VEGFA-224ENST00000523873 DCAF11Q8TEB1 546 aa18.65■□□□□ 0.58
VEGFA-224ENST00000523873 ASXL1Q8IXJ9 1541 aa18.64■□□□□ 0.57
VEGFA-224ENST00000523873 RBM33Q96EV2 1170 aaKnown RBP18.63■□□□□ 0.57
VEGFA-224ENST00000523873 LAMC1P11047 1609 aa18.62■□□□□ 0.57
VEGFA-224ENST00000523873 NKTRP30414 1462 aaKnown RBP18.61■□□□□ 0.57
VEGFA-224ENST00000523873 PIK3R4Q99570 1358 aa18.6■□□□□ 0.57
VEGFA-224ENST00000523873 AMOTL2Q9Y2J4 779 aa18.6■□□□□ 0.57
VEGFA-224ENST00000523873 CFAP70Q5T0N1 1121 aa18.59■□□□□ 0.57
VEGFA-224ENST00000523873 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.57
VEGFA-224ENST00000523873 PROSER2Q86WR7 435 aaPredicted RBP18.58■□□□□ 0.56
VEGFA-224ENST00000523873 L3MBTL2Q969R5 705 aa18.58■□□□□ 0.56
VEGFA-224ENST00000523873 KNDC1Q76NI1 1749 aa18.57■□□□□ 0.56
VEGFA-224ENST00000523873 TMEM94Q12767 1356 aa18.57■□□□□ 0.56
VEGFA-224ENST00000523873 TMEM132EQ6IEE7 984 aa18.57■□□□□ 0.56
VEGFA-224ENST00000523873 C14orf93Q9H972 538 aaKnown RBP18.56■□□□□ 0.56
VEGFA-224ENST00000523873 KIAA1210Q9ULL0 1709 aa18.54■□□□□ 0.56
VEGFA-224ENST00000523873 NALCNQ8IZF0 1738 aa18.54■□□□□ 0.56
VEGFA-224ENST00000523873 ADGRB1O14514 1584 aa18.53■□□□□ 0.56
VEGFA-224ENST00000523873 PRAG1Q86YV5 1406 aa18.53■□□□□ 0.56
VEGFA-224ENST00000523873 STK26Q9P289 416 aa18.53■□□□□ 0.56
VEGFA-224ENST00000523873 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.53■□□□□ 0.56
VEGFA-224ENST00000523873 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
VEGFA-224ENST00000523873 ROBO2Q9HCK4 1378 aa18.52■□□□□ 0.55
VEGFA-224ENST00000523873 TRPM1Q7Z4N2 1603 aa18.52■□□□□ 0.55
VEGFA-224ENST00000523873 YTHDC2Q9H6S0 1430 aaKnown RBP18.51■□□□□ 0.55
VEGFA-224ENST00000523873 TONSLQ96HA7 1378 aa18.51■□□□□ 0.55
VEGFA-224ENST00000523873 STAC3Q96MF2 364 aa18.5■□□□□ 0.55
VEGFA-224ENST00000523873 LRPPRCP42704 1394 aaKnown RBP18.5■□□□□ 0.55
VEGFA-224ENST00000523873 UBAP1LF5GYI3 381 aa18.49■□□□□ 0.55
VEGFA-224ENST00000523873 FBXO41Q8TF61 875 aa18.49■□□□□ 0.55
VEGFA-224ENST00000523873 ARHGEF28Q8N1W1 1705 aaKnown RBP18.49■□□□□ 0.55
VEGFA-224ENST00000523873 PTCH1Q13635 1447 aa18.49■□□□□ 0.55
VEGFA-224ENST00000523873 C14orf37Q86TY3 774 aa18.48■□□□□ 0.55
VEGFA-224ENST00000523873 TECPR2O15040 1411 aa18.47■□□□□ 0.55
VEGFA-224ENST00000523873 PLEKHH1Q9ULM0 1364 aa18.46■□□□□ 0.55
VEGFA-224ENST00000523873 ILDR1Q86SU0 546 aaPredicted RBP18.46■□□□□ 0.55
VEGFA-224ENST00000523873 MSH6P52701 1360 aa18.45■□□□□ 0.54
VEGFA-224ENST00000523873 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
VEGFA-224ENST00000523873 NBPF1Q3BBV0 1214 aa18.45■□□□□ 0.54
VEGFA-224ENST00000523873 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
VEGFA-224ENST00000523873 WAPLQ7Z5K2 1190 aa18.45■□□□□ 0.54
VEGFA-224ENST00000523873 PIP4K2BP78356 416 aa18.44■□□□□ 0.54
VEGFA-224ENST00000523873 CLSPNQ9HAW4 1339 aa18.44■□□□□ 0.54
VEGFA-224ENST00000523873 NCOA3Q9Y6Q9 1424 aa18.43■□□□□ 0.54
VEGFA-224ENST00000523873 TRAK1Q9UPV9 953 aa18.43■□□□□ 0.54
VEGFA-224ENST00000523873 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
VEGFA-224ENST00000523873 DLC1Q96QB1 1528 aa18.43■□□□□ 0.54
VEGFA-224ENST00000523873 ADGRL3Q9HAR2 1447 aa18.42■□□□□ 0.54
VEGFA-224ENST00000523873 TOM1O60784 492 aa18.42■□□□□ 0.54
VEGFA-224ENST00000523873 SAFB2Q14151 953 aaKnown RBP eCLIP18.4■□□□□ 0.54
VEGFA-224ENST00000523873 C19orf44Q9H6X5 657 aa18.4■□□□□ 0.54
VEGFA-224ENST00000523873 ROBO1Q9Y6N7 1651 aa18.4■□□□□ 0.54
VEGFA-224ENST00000523873 RGPD8O14715 1765 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms