RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 NEXMIFQ5QGS0 1516 aa36.95■■■■□ 3.51
NKX2-1-204ENST00000522719 DCAF11Q8TEB1 546 aa36.93■■■■□ 3.5
NKX2-1-204ENST00000522719 TMEM2Q9UHN6 1383 aa36.92■■■■□ 3.5
NKX2-1-204ENST00000522719 SLIT1O75093 1534 aa36.91■■■■□ 3.5
NKX2-1-204ENST00000522719 ARHGAP23Q9P227 1491 aa36.89■■■■□ 3.5
NKX2-1-204ENST00000522719 HDGFP51858 240 aaKnown RBP36.89■■■■□ 3.5
NKX2-1-204ENST00000522719 RIMS2Q9UQ26 1411 aa36.89■■■■□ 3.5
NKX2-1-204ENST00000522719 MYOM2P54296 1465 aa36.88■■■■□ 3.5
NKX2-1-204ENST00000522719 ZFYVE9O95405 1425 aa36.88■■■■□ 3.49
NKX2-1-204ENST00000522719 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.86■■■■□ 3.49
NKX2-1-204ENST00000522719 VGFO15240 615 aaPredicted RBP36.85■■■■□ 3.49
NKX2-1-204ENST00000522719 PPP1R15AO75807 674 aaPredicted RBP36.85■■■■□ 3.49
NKX2-1-204ENST00000522719 KDM2AQ9Y2K7 1162 aa36.85■■■■□ 3.49
NKX2-1-204ENST00000522719 LMTK3Q96Q04 1460 aa36.83■■■■□ 3.49
NKX2-1-204ENST00000522719 EID1Q9Y6B2 187 aa36.79■■■■□ 3.48
NKX2-1-204ENST00000522719 NRXN1Q9ULB1 1477 aa36.79■■■■□ 3.48
NKX2-1-204ENST00000522719 PRAG1Q86YV5 1406 aa36.75■■■■□ 3.47
NKX2-1-204ENST00000522719 NUTM2DQ5VT03 806 aaPredicted RBP36.75■■■■□ 3.47
NKX2-1-204ENST00000522719 TXNDC2Q86VQ3 553 aa36.75■■■■□ 3.47
NKX2-1-204ENST00000522719 ADGRF5Q8IZF2 1346 aa36.75■■■■□ 3.47
NKX2-1-204ENST00000522719 SCAF11Q99590 1463 aaKnown RBP36.74■■■■□ 3.47
NKX2-1-204ENST00000522719 ANKLE2Q86XL3 938 aa36.73■■■■□ 3.47
NKX2-1-204ENST00000522719 LTKP29376 864 aa36.72■■■■□ 3.47
NKX2-1-204ENST00000522719 POLR1AO95602 1720 aaPredicted RBP36.72■■■■□ 3.47
NKX2-1-204ENST00000522719 PIK3C2GO75747 1445 aa36.71■■■■□ 3.47
NKX2-1-204ENST00000522719 NBPF8Q3BBV2 869 aa36.68■■■■□ 3.46
NKX2-1-204ENST00000522719 KIAA1210Q9ULL0 1709 aa36.68■■■■□ 3.46
NKX2-1-204ENST00000522719 PLEKHG1Q9ULL1 1385 aa36.67■■■■□ 3.46
NKX2-1-204ENST00000522719 SETBP1Q9Y6X0 1596 aa36.65■■■■□ 3.46
NKX2-1-204ENST00000522719 TRPM1Q7Z4N2 1603 aa36.65■■■■□ 3.46
NKX2-1-204ENST00000522719 LAMC1P11047 1609 aa36.64■■■■□ 3.46
NKX2-1-204ENST00000522719 HSPA2P54652 639 aa36.63■■■■□ 3.45
NKX2-1-204ENST00000522719 MED14O60244 1454 aa36.61■■■■□ 3.45
NKX2-1-204ENST00000522719 NRXN3Q9Y4C0 1643 aa36.6■■■■□ 3.45
NKX2-1-204ENST00000522719 IQGAP1P46940 1657 aa36.59■■■■□ 3.45
NKX2-1-204ENST00000522719 C14orf93Q9H972 538 aaKnown RBP36.59■■■■□ 3.45
NKX2-1-204ENST00000522719 RALGAPBQ86X10 1494 aa36.58■■■■□ 3.45
NKX2-1-204ENST00000522719 ALKQ9UM73 1620 aa36.57■■■■□ 3.44
NKX2-1-204ENST00000522719 STRCQ7RTU9 1775 aa36.54■■■■□ 3.44
NKX2-1-204ENST00000522719 CFAP70Q5T0N1 1121 aa36.54■■■■□ 3.44
NKX2-1-204ENST00000522719 BCANQ96GW7 911 aa36.54■■■■□ 3.44
NKX2-1-204ENST00000522719 NCKAP5LQ9HCH0 1330 aa36.54■■■■□ 3.44
NKX2-1-204ENST00000522719 NPHP4O75161 1426 aaPredicted RBP36.54■■■■□ 3.44
NKX2-1-204ENST00000522719 SETD1AO15047 1707 aaKnown RBP36.53■■■■□ 3.44
NKX2-1-204ENST00000522719 DIP2AQ14689 1571 aa36.53■■■■□ 3.44
NKX2-1-204ENST00000522719 ADAMTS13Q76LX8 1427 aa36.52■■■■□ 3.44
NKX2-1-204ENST00000522719 ROCK2O75116 1388 aaKnown RBP36.5■■■■□ 3.43
NKX2-1-204ENST00000522719 GPRASP1Q5JY77 1395 aa36.48■■■■□ 3.43
NKX2-1-204ENST00000522719 SENP3Q9H4L4 574 aaPredicted RBP36.48■■■■□ 3.43
NKX2-1-204ENST00000522719 TBX22Q9Y458 520 aa36.47■■■■□ 3.43
NKX2-1-204ENST00000522719 NBPF1Q3BBV0 1214 aa36.46■■■■□ 3.43
NKX2-1-204ENST00000522719 ADGRB1O14514 1584 aa36.45■■■■□ 3.43
NKX2-1-204ENST00000522719 SLC26A8Q96RN1 970 aa36.42■■■■□ 3.42
NKX2-1-204ENST00000522719 ASXL1Q8IXJ9 1541 aa36.4■■■■□ 3.42
NKX2-1-204ENST00000522719 CARD11Q9BXL7 1154 aa36.4■■■■□ 3.42
NKX2-1-204ENST00000522719 METP08581 1390 aa36.37■■■■□ 3.41
NKX2-1-204ENST00000522719 PIK3R4Q99570 1358 aa36.37■■■■□ 3.41
NKX2-1-204ENST00000522719 TMEM132EQ6IEE7 984 aa36.36■■■■□ 3.41
NKX2-1-204ENST00000522719 DMRT2Q9Y5R5 561 aa36.34■■■■□ 3.41
NKX2-1-204ENST00000522719 YTHDC2Q9H6S0 1430 aaKnown RBP36.32■■■■□ 3.4
NKX2-1-204ENST00000522719 CHD2O14647 1828 aaKnown RBP36.32■■■■□ 3.4
NKX2-1-204ENST00000522719 LRPPRCP42704 1394 aaKnown RBP36.3■■■■□ 3.4
NKX2-1-204ENST00000522719 KNDC1Q76NI1 1749 aa36.29■■■■□ 3.4
NKX2-1-204ENST00000522719 ABCC11Q96J66 1382 aa36.26■■■■□ 3.4
NKX2-1-204ENST00000522719 USP47Q96K76 1375 aa36.25■■■■□ 3.39
NKX2-1-204ENST00000522719 TECPR2O15040 1411 aa36.24■■■■□ 3.39
NKX2-1-204ENST00000522719 PTPRUQ92729 1446 aa36.24■■■■□ 3.39
NKX2-1-204ENST00000522719 EIF3AQ14152 1382 aaKnown RBP36.24■■■■□ 3.39
NKX2-1-204ENST00000522719 EIF4G2P78344 907 aaKnown RBP eCLIP36.24■■■■□ 3.39
NKX2-1-204ENST00000522719 DLC1Q96QB1 1528 aa36.24■■■■□ 3.39
NKX2-1-204ENST00000522719 XRN1Q8IZH2 1706 aaKnown RBP36.23■■■■□ 3.39
NKX2-1-204ENST00000522719 ARHGEF28Q8N1W1 1705 aaKnown RBP36.23■■■■□ 3.39
NKX2-1-204ENST00000522719 STK26Q9P289 416 aa36.21■■■■□ 3.39
NKX2-1-204ENST00000522719 TRAK1Q9UPV9 953 aa36.21■■■■□ 3.39
NKX2-1-204ENST00000522719 AMOTL2Q9Y2J4 779 aa36.2■■■■□ 3.39
NKX2-1-204ENST00000522719 NWD1Q149M9 1564 aa36.19■■■■□ 3.38
NKX2-1-204ENST00000522719 CPS1P31327 1500 aa36.19■■■■□ 3.38
NKX2-1-204ENST00000522719 SIRT1Q96EB6 747 aa36.18■■■■□ 3.38
NKX2-1-204ENST00000522719 KCNA6P17658 529 aa36.17■■■■□ 3.38
NKX2-1-204ENST00000522719 ILDR1Q86SU0 546 aaPredicted RBP36.17■■■■□ 3.38
NKX2-1-204ENST00000522719 PTCH1Q13635 1447 aa36.15■■■■□ 3.38
NKX2-1-204ENST00000522719 FAM135BQ49AJ0 1406 aa36.15■■■■□ 3.38
NKX2-1-204ENST00000522719 HSPA5P11021 654 aaKnown RBP36.14■■■■□ 3.38
NKX2-1-204ENST00000522719 STRCP1A6NGW2 1772 aa36.09■■■■□ 3.37
NKX2-1-204ENST00000522719 ST20-MTHFSA0A0A6YYL1 179 aa36.09■■■■□ 3.37
NKX2-1-204ENST00000522719 CENPJQ9HC77 1338 aaPredicted RBP36.09■■■■□ 3.37
NKX2-1-204ENST00000522719 NKTRP30414 1462 aaKnown RBP36.09■■■■□ 3.37
NKX2-1-204ENST00000522719 ROBO2Q9HCK4 1378 aa36.08■■■■□ 3.37
NKX2-1-204ENST00000522719 QRICH2Q9H0J4 1663 aa36.08■■■■□ 3.37
NKX2-1-204ENST00000522719 PRAM1Q96QH2 718 aa36.07■■■■□ 3.36
NKX2-1-204ENST00000522719 POGKQ9P215 609 aa36.07■■■■□ 3.36
NKX2-1-204ENST00000522719 SBNO2Q9Y2G9 1366 aa36.03■■■■□ 3.36
NKX2-1-204ENST00000522719 SLC24A1O60721 1099 aa36.02■■■■□ 3.36
NKX2-1-204ENST00000522719 WAPLQ7Z5K2 1190 aa36.01■■■■□ 3.36
NKX2-1-204ENST00000522719 PLEKHH1Q9ULM0 1364 aa36■■■■□ 3.35
NKX2-1-204ENST00000522719 ZNF335Q9H4Z2 1342 aaPredicted RBP35.99■■■■□ 3.35
NKX2-1-204ENST00000522719 TESK2Q96S53 571 aa35.99■■■■□ 3.35
NKX2-1-204ENST00000522719 HIRIP3Q9BW71 556 aaPredicted RBP35.98■■■■□ 3.35
NKX2-1-204ENST00000522719 SAFB2Q14151 953 aaKnown RBP eCLIP35.95■■■■□ 3.35
NKX2-1-204ENST00000522719 PROSER2Q86WR7 435 aaPredicted RBP35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms