RNA–Protein interactions for RNA: ENST00000522397.5

TCEA1-210, Transcript of transcription elongation factor A1, humanhuman

TSL 3

Gene TCEA1, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-210ENST00000522397 PPP1R15AO75807 674 aaPredicted RBP28.77■■■□□ 2.2
TCEA1-210ENST00000522397 ZNF326Q5BKZ1 582 aaKnown RBP28.76■■■□□ 2.19
TCEA1-210ENST00000522397 CCDC144AA2RUR9 1427 aa28.76■■■□□ 2.19
TCEA1-210ENST00000522397 ZNF335Q9H4Z2 1342 aaPredicted RBP28.75■■■□□ 2.19
TCEA1-210ENST00000522397 HDGFP51858 240 aaKnown RBP28.75■■■□□ 2.19
TCEA1-210ENST00000522397 NUTM2DQ5VT03 806 aaPredicted RBP28.73■■■□□ 2.19
TCEA1-210ENST00000522397 LTBP4Q8N2S1 1624 aa28.72■■■□□ 2.19
TCEA1-210ENST00000522397 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.72■■■□□ 2.19
TCEA1-210ENST00000522397 BCANQ96GW7 911 aa28.72■■■□□ 2.19
TCEA1-210ENST00000522397 SENP3Q9H4L4 574 aaPredicted RBP28.72■■■□□ 2.19
TCEA1-210ENST00000522397 PLEKHG1Q9ULL1 1385 aa28.67■■■□□ 2.18
TCEA1-210ENST00000522397 NEXMIFQ5QGS0 1516 aa28.67■■■□□ 2.18
TCEA1-210ENST00000522397 CERKQ8TCT0 537 aa28.66■■■□□ 2.18
TCEA1-210ENST00000522397 SLC26A8Q96RN1 970 aa28.64■■■□□ 2.18
TCEA1-210ENST00000522397 STRCP1A6NGW2 1772 aa28.62■■■□□ 2.17
TCEA1-210ENST00000522397 PPLO60437 1756 aa28.62■■■□□ 2.17
TCEA1-210ENST00000522397 CPS1P31327 1500 aa28.61■■■□□ 2.17
TCEA1-210ENST00000522397 ANKRD30BQ9BXX2 1392 aa28.6■■■□□ 2.17
TCEA1-210ENST00000522397 SPATA31E1Q6ZUB1 1445 aa28.58■■■□□ 2.17
TCEA1-210ENST00000522397 RGL3Q3MIN7 710 aa28.57■■■□□ 2.16
TCEA1-210ENST00000522397 DIP2AQ14689 1571 aa28.57■■■□□ 2.16
TCEA1-210ENST00000522397 RPGRIP1LQ68CZ1 1315 aa28.56■■■□□ 2.16
TCEA1-210ENST00000522397 IFT172Q9UG01 1749 aa28.55■■■□□ 2.16
TCEA1-210ENST00000522397 NRXN3Q9Y4C0 1643 aa28.55■■■□□ 2.16
TCEA1-210ENST00000522397 SETBP1Q9Y6X0 1596 aa28.54■■■□□ 2.16
TCEA1-210ENST00000522397 ADAMTS13Q76LX8 1427 aa28.54■■■□□ 2.16
TCEA1-210ENST00000522397 IQSEC2Q5JU85 1478 aa28.52■■■□□ 2.16
TCEA1-210ENST00000522397 VGFO15240 615 aaPredicted RBP28.51■■■□□ 2.15
TCEA1-210ENST00000522397 CHD2O14647 1828 aaKnown RBP28.5■■■□□ 2.15
TCEA1-210ENST00000522397 TBX22Q9Y458 520 aa28.5■■■□□ 2.15
TCEA1-210ENST00000522397 NWD1Q149M9 1564 aa28.5■■■□□ 2.15
TCEA1-210ENST00000522397 KCNA6P17658 529 aa28.47■■■□□ 2.15
TCEA1-210ENST00000522397 LRRC7Q96NW7 1537 aa28.47■■■□□ 2.15
TCEA1-210ENST00000522397 FBXO41Q8TF61 875 aa28.45■■■□□ 2.14
TCEA1-210ENST00000522397 NKTRP30414 1462 aaKnown RBP28.42■■■□□ 2.14
TCEA1-210ENST00000522397 XIRP1Q702N8 1843 aaKnown RBP28.42■■■□□ 2.14
TCEA1-210ENST00000522397 SETD1AO15047 1707 aaKnown RBP28.41■■■□□ 2.14
TCEA1-210ENST00000522397 PIK3R4Q99570 1358 aa28.41■■■□□ 2.14
TCEA1-210ENST00000522397 ADGRF5Q8IZF2 1346 aa28.41■■■□□ 2.14
TCEA1-210ENST00000522397 ALKQ9UM73 1620 aa28.4■■■□□ 2.14
TCEA1-210ENST00000522397 DHX57Q6P158 1386 aaKnown RBP28.4■■■□□ 2.14
TCEA1-210ENST00000522397 ILDR1Q86SU0 546 aaPredicted RBP28.4■■■□□ 2.14
TCEA1-210ENST00000522397 PCGF6Q9BYE7 350 aa28.39■■■□□ 2.14
TCEA1-210ENST00000522397 METP08581 1390 aa28.37■■■□□ 2.13
TCEA1-210ENST00000522397 PROSER2Q86WR7 435 aaPredicted RBP28.37■■■□□ 2.13
TCEA1-210ENST00000522397 MYOM2P54296 1465 aa28.37■■■□□ 2.13
TCEA1-210ENST00000522397 PTPRUQ92729 1446 aa28.36■■■□□ 2.13
TCEA1-210ENST00000522397 XRN1Q8IZH2 1706 aaKnown RBP28.36■■■□□ 2.13
TCEA1-210ENST00000522397 TMEM94Q12767 1356 aa28.35■■■□□ 2.13
TCEA1-210ENST00000522397 AMOTL2Q9Y2J4 779 aa28.34■■■□□ 2.13
TCEA1-210ENST00000522397 PIK3C2GO75747 1445 aa28.34■■■□□ 2.13
TCEA1-210ENST00000522397 UBAP1LF5GYI3 381 aa28.33■■■□□ 2.13
TCEA1-210ENST00000522397 RBM33Q96EV2 1170 aaKnown RBP28.33■■■□□ 2.13
TCEA1-210ENST00000522397 DCAF11Q8TEB1 546 aa28.31■■■□□ 2.12
TCEA1-210ENST00000522397 NRXN1Q9ULB1 1477 aa28.3■■■□□ 2.12
TCEA1-210ENST00000522397 KDM2AQ9Y2K7 1162 aa28.3■■■□□ 2.12
TCEA1-210ENST00000522397 LAMC1P11047 1609 aa28.29■■■□□ 2.12
TCEA1-210ENST00000522397 SIN3AQ96ST3 1273 aa28.27■■■□□ 2.12
TCEA1-210ENST00000522397 TOM1O60784 492 aa28.25■■■□□ 2.11
TCEA1-210ENST00000522397 NEUROD1Q13562 356 aa28.24■■■□□ 2.11
TCEA1-210ENST00000522397 C14orf37Q86TY3 774 aa28.24■■■□□ 2.11
TCEA1-210ENST00000522397 ASXL1Q8IXJ9 1541 aa28.23■■■□□ 2.11
TCEA1-210ENST00000522397 SCAF1Q9H7N4 1312 aaKnown RBP28.23■■■□□ 2.11
TCEA1-210ENST00000522397 MSH6P52701 1360 aa28.22■■■□□ 2.11
TCEA1-210ENST00000522397 PIP4K2BP78356 416 aa28.21■■■□□ 2.11
TCEA1-210ENST00000522397 CFAP70Q5T0N1 1121 aa28.2■■■□□ 2.1
TCEA1-210ENST00000522397 STAC3Q96MF2 364 aa28.2■■■□□ 2.1
TCEA1-210ENST00000522397 TMEM132EQ6IEE7 984 aa28.19■■■□□ 2.1
TCEA1-210ENST00000522397 C14orf93Q9H972 538 aaKnown RBP28.19■■■□□ 2.1
TCEA1-210ENST00000522397 PTCH1Q13635 1447 aa28.18■■■□□ 2.1
TCEA1-210ENST00000522397 NCOA3Q9Y6Q9 1424 aa28.18■■■□□ 2.1
TCEA1-210ENST00000522397 KNDC1Q76NI1 1749 aa28.18■■■□□ 2.1
TCEA1-210ENST00000522397 STK26Q9P289 416 aa28.17■■■□□ 2.1
TCEA1-210ENST00000522397 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.17■■■□□ 2.1
TCEA1-210ENST00000522397 ROBO2Q9HCK4 1378 aa28.15■■■□□ 2.1
TCEA1-210ENST00000522397 PRAG1Q86YV5 1406 aa28.15■■■□□ 2.1
TCEA1-210ENST00000522397 NALCNQ8IZF0 1738 aa28.15■■■□□ 2.1
TCEA1-210ENST00000522397 LRPPRCP42704 1394 aaKnown RBP28.14■■■□□ 2.1
TCEA1-210ENST00000522397 YTHDC2Q9H6S0 1430 aaKnown RBP28.14■■■□□ 2.1
TCEA1-210ENST00000522397 L3MBTL2Q969R5 705 aa28.12■■■□□ 2.09
TCEA1-210ENST00000522397 TECPR2O15040 1411 aa28.1■■■□□ 2.09
TCEA1-210ENST00000522397 C19orf44Q9H6X5 657 aa28.1■■■□□ 2.09
TCEA1-210ENST00000522397 ADGRL3Q9HAR2 1447 aa28.09■■■□□ 2.09
TCEA1-210ENST00000522397 ADGRB1O14514 1584 aa28.09■■■□□ 2.09
TCEA1-210ENST00000522397 ABCC11Q96J66 1382 aa28.09■■■□□ 2.09
TCEA1-210ENST00000522397 KIAA1210Q9ULL0 1709 aa28.09■■■□□ 2.09
TCEA1-210ENST00000522397 ATF3P18847 181 aa28.08■■■□□ 2.09
TCEA1-210ENST00000522397 DCCP43146 1447 aa28.05■■■□□ 2.08
TCEA1-210ENST00000522397 CADPS2Q86UW7 1296 aa28.05■■■□□ 2.08
TCEA1-210ENST00000522397 TONSLQ96HA7 1378 aa28.05■■■□□ 2.08
TCEA1-210ENST00000522397 ROBO1Q9Y6N7 1651 aa28.04■■■□□ 2.08
TCEA1-210ENST00000522397 WAPLQ7Z5K2 1190 aa28.02■■■□□ 2.08
TCEA1-210ENST00000522397 PLEKHH1Q9ULM0 1364 aa28.01■■■□□ 2.07
TCEA1-210ENST00000522397 SLAIN2Q9P270 581 aa28.01■■■□□ 2.07
TCEA1-210ENST00000522397 DLC1Q96QB1 1528 aa28.01■■■□□ 2.07
TCEA1-210ENST00000522397 FAM135BQ49AJ0 1406 aa28■■■□□ 2.07
TCEA1-210ENST00000522397 TRAK1Q9UPV9 953 aa27.99■■■□□ 2.07
TCEA1-210ENST00000522397 TRPM1Q7Z4N2 1603 aa27.97■■■□□ 2.07
TCEA1-210ENST00000522397 ARHGEF28Q8N1W1 1705 aaKnown RBP27.97■■■□□ 2.07
TCEA1-210ENST00000522397 HSPA1LP34931 641 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 240.5 ms