RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 CLTCL1P53675 1640 aa10.15□□□□□ -0.79
SPIDR-218ENST00000522222 ZNF335Q9H4Z2 1342 aaPredicted RBP10.14□□□□□ -0.79
SPIDR-218ENST00000522222 C1QBPQ07021 282 aaKnown RBP10.14□□□□□ -0.79
SPIDR-218ENST00000522222 STAG3Q9UJ98 1225 aa10.14□□□□□ -0.79
SPIDR-218ENST00000522222 ZFYVE9O95405 1425 aa10.14□□□□□ -0.79
SPIDR-218ENST00000522222 DCAF8L1A6NGE4 600 aa10.13□□□□□ -0.79
SPIDR-218ENST00000522222 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
SPIDR-218ENST00000522222 SETD5Q9C0A6 1442 aa10.13□□□□□ -0.79
SPIDR-218ENST00000522222 LTKP29376 864 aa10.12□□□□□ -0.79
SPIDR-218ENST00000522222 CERKQ8TCT0 537 aa10.12□□□□□ -0.79
SPIDR-218ENST00000522222 RIMS2Q9UQ26 1411 aa10.12□□□□□ -0.79
SPIDR-218ENST00000522222 TXNDC2Q86VQ3 553 aa10.11□□□□□ -0.79
SPIDR-218ENST00000522222 RAB3GAP2Q9H2M9 1393 aa10.11□□□□□ -0.79
SPIDR-218ENST00000522222 IQSEC2Q5JU85 1478 aa10.1□□□□□ -0.79
SPIDR-218ENST00000522222 ILDR1Q86SU0 546 aaPredicted RBP10.1□□□□□ -0.79
SPIDR-218ENST00000522222 SLC4A1APQ9BWU0 796 aaKnown RBP10.1□□□□□ -0.79
SPIDR-218ENST00000522222 EID1Q9Y6B2 187 aa10.1□□□□□ -0.79
SPIDR-218ENST00000522222 CPS1P31327 1500 aa10.1□□□□□ -0.79
SPIDR-218ENST00000522222 STRCP1A6NGW2 1772 aa10.09□□□□□ -0.79
SPIDR-218ENST00000522222 CHGAP10645 457 aaKnown RBP10.09□□□□□ -0.79
SPIDR-218ENST00000522222 FBXO41Q8TF61 875 aa10.08□□□□□ -0.8
SPIDR-218ENST00000522222 PLEKHG1Q9ULL1 1385 aa10.08□□□□□ -0.8
SPIDR-218ENST00000522222 NWD1Q149M9 1564 aa10.07□□□□□ -0.8
SPIDR-218ENST00000522222 KIF1BO60333 1816 aa10.07□□□□□ -0.8
SPIDR-218ENST00000522222 NEXMIFQ5QGS0 1516 aa10.07□□□□□ -0.8
SPIDR-218ENST00000522222 PPP1R15AO75807 674 aaPredicted RBP10.06□□□□□ -0.8
SPIDR-218ENST00000522222 DIP2AQ14689 1571 aa10.05□□□□□ -0.8
SPIDR-218ENST00000522222 NRXN3Q9Y4C0 1643 aa10.05□□□□□ -0.8
SPIDR-218ENST00000522222 MPHOSPH9Q99550 1183 aa10.05□□□□□ -0.8
SPIDR-218ENST00000522222 ADAMTS13Q76LX8 1427 aa10.05□□□□□ -0.8
SPIDR-218ENST00000522222 SETBP1Q9Y6X0 1596 aa10.05□□□□□ -0.8
SPIDR-218ENST00000522222 LRRC7Q96NW7 1537 aa10.04□□□□□ -0.8
SPIDR-218ENST00000522222 NUTM2DQ5VT03 806 aaPredicted RBP10.04□□□□□ -0.8
SPIDR-218ENST00000522222 SLC26A8Q96RN1 970 aa10.04□□□□□ -0.8
SPIDR-218ENST00000522222 CCDC144AA2RUR9 1427 aa10.04□□□□□ -0.8
SPIDR-218ENST00000522222 ACIN1Q9UKV3 1341 aaKnown RBP10.04□□□□□ -0.8
SPIDR-218ENST00000522222 NKTRP30414 1462 aaKnown RBP10.04□□□□□ -0.8
SPIDR-218ENST00000522222 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.03□□□□□ -0.8
SPIDR-218ENST00000522222 SPATA31E1Q6ZUB1 1445 aa10.02□□□□□ -0.81
SPIDR-218ENST00000522222 PPLO60437 1756 aa10.02□□□□□ -0.81
SPIDR-218ENST00000522222 ZNF326Q5BKZ1 582 aaKnown RBP10.02□□□□□ -0.81
SPIDR-218ENST00000522222 BCANQ96GW7 911 aa10.02□□□□□ -0.81
SPIDR-218ENST00000522222 SCAF1Q9H7N4 1312 aaKnown RBP10.02□□□□□ -0.81
SPIDR-218ENST00000522222 ALKQ9UM73 1620 aa10.01□□□□□ -0.81
SPIDR-218ENST00000522222 XIRP1Q702N8 1843 aaKnown RBP10.01□□□□□ -0.81
SPIDR-218ENST00000522222 HDGFP51858 240 aaKnown RBP10.01□□□□□ -0.81
SPIDR-218ENST00000522222 IFT172Q9UG01 1749 aa10.01□□□□□ -0.81
SPIDR-218ENST00000522222 CHD2O14647 1828 aaKnown RBP10□□□□□ -0.81
SPIDR-218ENST00000522222 SETD1AO15047 1707 aaKnown RBP9.99□□□□□ -0.81
SPIDR-218ENST00000522222 XRN1Q8IZH2 1706 aaKnown RBP9.99□□□□□ -0.81
SPIDR-218ENST00000522222 UBAP1LF5GYI3 381 aa9.99□□□□□ -0.81
SPIDR-218ENST00000522222 KCNA6P17658 529 aa9.99□□□□□ -0.81
SPIDR-218ENST00000522222 NCBP3Q53F19 620 aaKnown RBP9.99□□□□□ -0.81
SPIDR-218ENST00000522222 TBX22Q9Y458 520 aa9.98□□□□□ -0.81
SPIDR-218ENST00000522222 TMEM94Q12767 1356 aa9.98□□□□□ -0.81
SPIDR-218ENST00000522222 PIK3R4Q99570 1358 aa9.98□□□□□ -0.81
SPIDR-218ENST00000522222 ANKRD30BQ9BXX2 1392 aa9.98□□□□□ -0.81
SPIDR-218ENST00000522222 PTPRUQ92729 1446 aa9.98□□□□□ -0.81
SPIDR-218ENST00000522222 RPGRIP1LQ68CZ1 1315 aa9.96□□□□□ -0.82
SPIDR-218ENST00000522222 METP08581 1390 aa9.96□□□□□ -0.82
SPIDR-218ENST00000522222 MYOM2P54296 1465 aa9.95□□□□□ -0.82
SPIDR-218ENST00000522222 ASXL1Q8IXJ9 1541 aa9.95□□□□□ -0.82
SPIDR-218ENST00000522222 PIK3C2GO75747 1445 aa9.94□□□□□ -0.82
SPIDR-218ENST00000522222 RGL3Q3MIN7 710 aa9.94□□□□□ -0.82
SPIDR-218ENST00000522222 PROSER2Q86WR7 435 aaPredicted RBP9.94□□□□□ -0.82
SPIDR-218ENST00000522222 RBM33Q96EV2 1170 aaKnown RBP9.94□□□□□ -0.82
SPIDR-218ENST00000522222 NRXN1Q9ULB1 1477 aa9.93□□□□□ -0.82
SPIDR-218ENST00000522222 PRAG1Q86YV5 1406 aa9.93□□□□□ -0.82
SPIDR-218ENST00000522222 ADGRF5Q8IZF2 1346 aa9.93□□□□□ -0.82
SPIDR-218ENST00000522222 VGFO15240 615 aaPredicted RBP9.93□□□□□ -0.82
SPIDR-218ENST00000522222 TOM1O60784 492 aa9.93□□□□□ -0.82
SPIDR-218ENST00000522222 PTCH1Q13635 1447 aa9.92□□□□□ -0.82
SPIDR-218ENST00000522222 MSH6P52701 1360 aa9.92□□□□□ -0.82
SPIDR-218ENST00000522222 PIP4K2BP78356 416 aa9.92□□□□□ -0.82
SPIDR-218ENST00000522222 LAMC1P11047 1609 aa9.92□□□□□ -0.82
SPIDR-218ENST00000522222 NALCNQ8IZF0 1738 aa9.91□□□□□ -0.82
SPIDR-218ENST00000522222 AMOTL2Q9Y2J4 779 aa9.91□□□□□ -0.82
SPIDR-218ENST00000522222 NCOA3Q9Y6Q9 1424 aa9.9□□□□□ -0.82
SPIDR-218ENST00000522222 KNDC1Q76NI1 1749 aa9.9□□□□□ -0.83
SPIDR-218ENST00000522222 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.9□□□□□ -0.83
SPIDR-218ENST00000522222 ADGRL3Q9HAR2 1447 aa9.9□□□□□ -0.83
SPIDR-218ENST00000522222 ROBO2Q9HCK4 1378 aa9.89□□□□□ -0.83
SPIDR-218ENST00000522222 ROBO1Q9Y6N7 1651 aa9.89□□□□□ -0.83
SPIDR-218ENST00000522222 DCCP43146 1447 aa9.89□□□□□ -0.83
SPIDR-218ENST00000522222 C14orf37Q86TY3 774 aa9.88□□□□□ -0.83
SPIDR-218ENST00000522222 TECPR2O15040 1411 aa9.88□□□□□ -0.83
SPIDR-218ENST00000522222 DHX57Q6P158 1386 aaKnown RBP9.88□□□□□ -0.83
SPIDR-218ENST00000522222 NPM3O75607 178 aaKnown RBP9.87□□□□□ -0.83
SPIDR-218ENST00000522222 HSPA1LP34931 641 aa9.87□□□□□ -0.83
SPIDR-218ENST00000522222 CNKSR2Q8WXI2 1034 aa9.87□□□□□ -0.83
SPIDR-218ENST00000522222 LRPPRCP42704 1394 aaKnown RBP9.87□□□□□ -0.83
SPIDR-218ENST00000522222 ADGRB1O14514 1584 aa9.86□□□□□ -0.83
SPIDR-218ENST00000522222 FAM135BQ49AJ0 1406 aa9.86□□□□□ -0.83
SPIDR-218ENST00000522222 CCER1Q8TC90 406 aaPredicted RBP9.86□□□□□ -0.83
SPIDR-218ENST00000522222 YTHDC2Q9H6S0 1430 aaKnown RBP9.86□□□□□ -0.83
SPIDR-218ENST00000522222 CDC42BPGQ6DT37 1551 aa9.85□□□□□ -0.83
SPIDR-218ENST00000522222 MST1RQ04912 1400 aa9.84□□□□□ -0.83
SPIDR-218ENST00000522222 CFAP70Q5T0N1 1121 aa9.84□□□□□ -0.83
SPIDR-218ENST00000522222 TMEM132EQ6IEE7 984 aa9.84□□□□□ -0.83
SPIDR-218ENST00000522222 C19orf44Q9H6X5 657 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms