RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.83
CTNNA1-226ENST00000521368 LTKP29376 864 aa20.26■□□□□ 0.83
CTNNA1-226ENST00000521368 HDGFP51858 240 aaKnown RBP20.26■□□□□ 0.83
CTNNA1-226ENST00000521368 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
CTNNA1-226ENST00000521368 SPATA31E1Q6ZUB1 1445 aa20.23■□□□□ 0.83
CTNNA1-226ENST00000521368 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
CTNNA1-226ENST00000521368 PCGF6Q9BYE7 350 aa20.21■□□□□ 0.83
CTNNA1-226ENST00000521368 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
CTNNA1-226ENST00000521368 ZNF326Q5BKZ1 582 aaKnown RBP20.2■□□□□ 0.82
CTNNA1-226ENST00000521368 RPGRIP1LQ68CZ1 1315 aa20.2■□□□□ 0.82
CTNNA1-226ENST00000521368 DHX57Q6P158 1386 aaKnown RBP20.2■□□□□ 0.82
CTNNA1-226ENST00000521368 PPLO60437 1756 aa20.19■□□□□ 0.82
CTNNA1-226ENST00000521368 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
CTNNA1-226ENST00000521368 IFT172Q9UG01 1749 aa20.17■□□□□ 0.82
CTNNA1-226ENST00000521368 DIP2AQ14689 1571 aa20.15■□□□□ 0.82
CTNNA1-226ENST00000521368 SETBP1Q9Y6X0 1596 aa20.15■□□□□ 0.82
CTNNA1-226ENST00000521368 VGFO15240 615 aaPredicted RBP20.13■□□□□ 0.81
CTNNA1-226ENST00000521368 LTBP4Q8N2S1 1624 aa20.12■□□□□ 0.81
CTNNA1-226ENST00000521368 NRXN3Q9Y4C0 1643 aa20.12■□□□□ 0.81
CTNNA1-226ENST00000521368 RGL3Q3MIN7 710 aa20.11■□□□□ 0.81
CTNNA1-226ENST00000521368 NUTM2DQ5VT03 806 aaPredicted RBP20.11■□□□□ 0.81
CTNNA1-226ENST00000521368 ADAMTS13Q76LX8 1427 aa20.1■□□□□ 0.81
CTNNA1-226ENST00000521368 ZNF335Q9H4Z2 1342 aaPredicted RBP20.09■□□□□ 0.81
CTNNA1-226ENST00000521368 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
CTNNA1-226ENST00000521368 MYOM2P54296 1465 aa20.09■□□□□ 0.81
CTNNA1-226ENST00000521368 BCANQ96GW7 911 aa20.08■□□□□ 0.81
CTNNA1-226ENST00000521368 CPS1P31327 1500 aa20.07■□□□□ 0.8
CTNNA1-226ENST00000521368 SLC26A8Q96RN1 970 aa20.07■□□□□ 0.8
CTNNA1-226ENST00000521368 PIK3R4Q99570 1358 aa20.07■□□□□ 0.8
CTNNA1-226ENST00000521368 NWD1Q149M9 1564 aa20.06■□□□□ 0.8
CTNNA1-226ENST00000521368 STAC3Q96MF2 364 aa20.06■□□□□ 0.8
CTNNA1-226ENST00000521368 STRCP1A6NGW2 1772 aa20.06■□□□□ 0.8
CTNNA1-226ENST00000521368 NRXN1Q9ULB1 1477 aa20.05■□□□□ 0.8
CTNNA1-226ENST00000521368 SETD1AO15047 1707 aaKnown RBP20.04■□□□□ 0.8
CTNNA1-226ENST00000521368 CHD2O14647 1828 aaKnown RBP20.04■□□□□ 0.8
CTNNA1-226ENST00000521368 PIK3C2GO75747 1445 aa20.03■□□□□ 0.8
CTNNA1-226ENST00000521368 ALKQ9UM73 1620 aa20.03■□□□□ 0.8
CTNNA1-226ENST00000521368 ADGRF5Q8IZF2 1346 aa20.02■□□□□ 0.8
CTNNA1-226ENST00000521368 IQSEC2Q5JU85 1478 aa20.02■□□□□ 0.8
CTNNA1-226ENST00000521368 NKTRP30414 1462 aaKnown RBP20.01■□□□□ 0.79
CTNNA1-226ENST00000521368 KCNA6P17658 529 aa20.01■□□□□ 0.79
CTNNA1-226ENST00000521368 LAMC1P11047 1609 aa20.01■□□□□ 0.79
CTNNA1-226ENST00000521368 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
CTNNA1-226ENST00000521368 CERKQ8TCT0 537 aa19.99■□□□□ 0.79
CTNNA1-226ENST00000521368 SIN3AQ96ST3 1273 aa19.99■□□□□ 0.79
CTNNA1-226ENST00000521368 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
CTNNA1-226ENST00000521368 DCAF11Q8TEB1 546 aa19.98■□□□□ 0.79
CTNNA1-226ENST00000521368 METP08581 1390 aa19.97■□□□□ 0.79
CTNNA1-226ENST00000521368 XRN1Q8IZH2 1706 aaKnown RBP19.97■□□□□ 0.79
CTNNA1-226ENST00000521368 LRRC7Q96NW7 1537 aa19.97■□□□□ 0.79
CTNNA1-226ENST00000521368 PTPRUQ92729 1446 aa19.95■□□□□ 0.78
CTNNA1-226ENST00000521368 PRAG1Q86YV5 1406 aa19.94■□□□□ 0.78
CTNNA1-226ENST00000521368 NEUROD1Q13562 356 aa19.94■□□□□ 0.78
CTNNA1-226ENST00000521368 C14orf93Q9H972 538 aaKnown RBP19.93■□□□□ 0.78
CTNNA1-226ENST00000521368 KDM2AQ9Y2K7 1162 aa19.92■□□□□ 0.78
CTNNA1-226ENST00000521368 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
CTNNA1-226ENST00000521368 XIRP1Q702N8 1843 aaKnown RBP19.91■□□□□ 0.78
CTNNA1-226ENST00000521368 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
CTNNA1-226ENST00000521368 AMOTL2Q9Y2J4 779 aa19.91■□□□□ 0.78
CTNNA1-226ENST00000521368 KIAA1210Q9ULL0 1709 aa19.9■□□□□ 0.78
CTNNA1-226ENST00000521368 NCOA3Q9Y6Q9 1424 aa19.9■□□□□ 0.78
CTNNA1-226ENST00000521368 PTCH1Q13635 1447 aa19.89■□□□□ 0.77
CTNNA1-226ENST00000521368 KNDC1Q76NI1 1749 aa19.89■□□□□ 0.77
CTNNA1-226ENST00000521368 TMEM94Q12767 1356 aa19.88■□□□□ 0.77
CTNNA1-226ENST00000521368 TONSLQ96HA7 1378 aa19.88■□□□□ 0.77
CTNNA1-226ENST00000521368 CFAP70Q5T0N1 1121 aa19.88■□□□□ 0.77
CTNNA1-226ENST00000521368 PROSER2Q86WR7 435 aaPredicted RBP19.88■□□□□ 0.77
CTNNA1-226ENST00000521368 ADGRB1O14514 1584 aa19.87■□□□□ 0.77
CTNNA1-226ENST00000521368 TECPR2O15040 1411 aa19.87■□□□□ 0.77
CTNNA1-226ENST00000521368 LRPPRCP42704 1394 aaKnown RBP19.86■□□□□ 0.77
CTNNA1-226ENST00000521368 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
CTNNA1-226ENST00000521368 YTHDC2Q9H6S0 1430 aaKnown RBP19.85■□□□□ 0.77
CTNNA1-226ENST00000521368 ABCC11Q96J66 1382 aa19.85■□□□□ 0.77
CTNNA1-226ENST00000521368 TMEM132EQ6IEE7 984 aa19.83■□□□□ 0.77
CTNNA1-226ENST00000521368 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
CTNNA1-226ENST00000521368 ROBO2Q9HCK4 1378 aa19.82■□□□□ 0.76
CTNNA1-226ENST00000521368 TRPM1Q7Z4N2 1603 aa19.81■□□□□ 0.76
CTNNA1-226ENST00000521368 DLC1Q96QB1 1528 aa19.81■□□□□ 0.76
CTNNA1-226ENST00000521368 FBXO41Q8TF61 875 aa19.8■□□□□ 0.76
CTNNA1-226ENST00000521368 SIRT1Q96EB6 747 aa19.8■□□□□ 0.76
CTNNA1-226ENST00000521368 MSH6P52701 1360 aa19.8■□□□□ 0.76
CTNNA1-226ENST00000521368 FAM135BQ49AJ0 1406 aa19.79■□□□□ 0.76
CTNNA1-226ENST00000521368 RBM33Q96EV2 1170 aaKnown RBP19.78■□□□□ 0.76
CTNNA1-226ENST00000521368 NALCNQ8IZF0 1738 aa19.78■□□□□ 0.76
CTNNA1-226ENST00000521368 DCCP43146 1447 aa19.77■□□□□ 0.76
CTNNA1-226ENST00000521368 ADGRL3Q9HAR2 1447 aa19.77■□□□□ 0.76
CTNNA1-226ENST00000521368 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.77■□□□□ 0.76
CTNNA1-226ENST00000521368 TOM1O60784 492 aa19.77■□□□□ 0.76
CTNNA1-226ENST00000521368 STK26Q9P289 416 aa19.77■□□□□ 0.76
CTNNA1-226ENST00000521368 C19orf44Q9H6X5 657 aa19.76■□□□□ 0.75
CTNNA1-226ENST00000521368 UBAP1LF5GYI3 381 aa19.75■□□□□ 0.75
CTNNA1-226ENST00000521368 C14orf37Q86TY3 774 aa19.74■□□□□ 0.75
CTNNA1-226ENST00000521368 ARHGEF28Q8N1W1 1705 aaKnown RBP19.73■□□□□ 0.75
CTNNA1-226ENST00000521368 NBPF1Q3BBV0 1214 aa19.73■□□□□ 0.75
CTNNA1-226ENST00000521368 NBPF8Q3BBV2 869 aa19.73■□□□□ 0.75
CTNNA1-226ENST00000521368 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
CTNNA1-226ENST00000521368 GPRASP1Q5JY77 1395 aa19.71■□□□□ 0.75
CTNNA1-226ENST00000521368 CADPS2Q86UW7 1296 aa19.71■□□□□ 0.75
CTNNA1-226ENST00000521368 ROCK2O75116 1388 aaKnown RBP19.7■□□□□ 0.74
CTNNA1-226ENST00000521368 PLEKHH1Q9ULM0 1364 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms