RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 MED14O60244 1454 aa9.26□□□□□ -0.93
IGHV4-55-201ENST00000520889 NEXMIFQ5QGS0 1516 aa9.26□□□□□ -0.93
IGHV4-55-201ENST00000520889 PLPPR3Q6T4P5 718 aa9.25□□□□□ -0.93
IGHV4-55-201ENST00000520889 MYOM2P54296 1465 aa9.25□□□□□ -0.93
IGHV4-55-201ENST00000520889 STRCQ7RTU9 1775 aa9.24□□□□□ -0.93
IGHV4-55-201ENST00000520889 RIMS2Q9UQ26 1411 aa9.23□□□□□ -0.93
IGHV4-55-201ENST00000520889 SCAF11Q99590 1463 aaKnown RBP9.23□□□□□ -0.93
IGHV4-55-201ENST00000520889 NRXN1Q9ULB1 1477 aa9.23□□□□□ -0.93
IGHV4-55-201ENST00000520889 VGFO15240 615 aaPredicted RBP9.23□□□□□ -0.93
IGHV4-55-201ENST00000520889 ANKLE2Q86XL3 938 aa9.23□□□□□ -0.93
IGHV4-55-201ENST00000520889 EID1Q9Y6B2 187 aa9.23□□□□□ -0.93
IGHV4-55-201ENST00000520889 KIAA1210Q9ULL0 1709 aa9.22□□□□□ -0.93
IGHV4-55-201ENST00000520889 DIP2AQ14689 1571 aa9.22□□□□□ -0.93
IGHV4-55-201ENST00000520889 SETBP1Q9Y6X0 1596 aa9.22□□□□□ -0.93
IGHV4-55-201ENST00000520889 POTEDQ86YR6 584 aa9.22□□□□□ -0.93
IGHV4-55-201ENST00000520889 CCER1Q8TC90 406 aaPredicted RBP9.22□□□□□ -0.93
IGHV4-55-201ENST00000520889 DMRT2Q9Y5R5 561 aa9.22□□□□□ -0.93
IGHV4-55-201ENST00000520889 LAMC1P11047 1609 aa9.22□□□□□ -0.93
IGHV4-55-201ENST00000520889 IQGAP1P46940 1657 aa9.22□□□□□ -0.93
IGHV4-55-201ENST00000520889 PLEKHG1Q9ULL1 1385 aa9.22□□□□□ -0.93
IGHV4-55-201ENST00000520889 CHGAP10645 457 aaKnown RBP9.21□□□□□ -0.94
IGHV4-55-201ENST00000520889 ZNF326Q5BKZ1 582 aaKnown RBP9.21□□□□□ -0.94
IGHV4-55-201ENST00000520889 TXNDC2Q86VQ3 553 aa9.2□□□□□ -0.94
IGHV4-55-201ENST00000520889 SIN3AQ96ST3 1273 aa9.2□□□□□ -0.94
IGHV4-55-201ENST00000520889 NPHP4O75161 1426 aaPredicted RBP9.2□□□□□ -0.94
IGHV4-55-201ENST00000520889 NRXN3Q9Y4C0 1643 aa9.2□□□□□ -0.94
IGHV4-55-201ENST00000520889 LTKP29376 864 aa9.19□□□□□ -0.94
IGHV4-55-201ENST00000520889 TONSLQ96HA7 1378 aa9.19□□□□□ -0.94
IGHV4-55-201ENST00000520889 PIK3R4Q99570 1358 aa9.19□□□□□ -0.94
IGHV4-55-201ENST00000520889 PIK3C2GO75747 1445 aa9.19□□□□□ -0.94
IGHV4-55-201ENST00000520889 SETD1AO15047 1707 aaKnown RBP9.19□□□□□ -0.94
IGHV4-55-201ENST00000520889 HSPA2P54652 639 aa9.18□□□□□ -0.94
IGHV4-55-201ENST00000520889 PPP1R15AO75807 674 aaPredicted RBP9.17□□□□□ -0.94
IGHV4-55-201ENST00000520889 RGL3Q3MIN7 710 aa9.17□□□□□ -0.94
IGHV4-55-201ENST00000520889 L3MBTL2Q969R5 705 aa9.17□□□□□ -0.94
IGHV4-55-201ENST00000520889 TBX22Q9Y458 520 aa9.17□□□□□ -0.94
IGHV4-55-201ENST00000520889 CHD2O14647 1828 aaKnown RBP9.17□□□□□ -0.94
IGHV4-55-201ENST00000520889 ALKQ9UM73 1620 aa9.16□□□□□ -0.94
IGHV4-55-201ENST00000520889 ADAMTS13Q76LX8 1427 aa9.16□□□□□ -0.94
IGHV4-55-201ENST00000520889 PRAG1Q86YV5 1406 aa9.16□□□□□ -0.94
IGHV4-55-201ENST00000520889 NEUROD1Q13562 356 aa9.16□□□□□ -0.94
IGHV4-55-201ENST00000520889 DCAF11Q8TEB1 546 aa9.16□□□□□ -0.94
IGHV4-55-201ENST00000520889 ADGRF5Q8IZF2 1346 aa9.15□□□□□ -0.94
IGHV4-55-201ENST00000520889 NCKAP5LQ9HCH0 1330 aa9.15□□□□□ -0.94
IGHV4-55-201ENST00000520889 C14orf93Q9H972 538 aaKnown RBP9.15□□□□□ -0.94
IGHV4-55-201ENST00000520889 TRPM1Q7Z4N2 1603 aa9.15□□□□□ -0.94
IGHV4-55-201ENST00000520889 NWD1Q149M9 1564 aa9.15□□□□□ -0.95
IGHV4-55-201ENST00000520889 KNDC1Q76NI1 1749 aa9.14□□□□□ -0.95
IGHV4-55-201ENST00000520889 ADGRB1O14514 1584 aa9.12□□□□□ -0.95
IGHV4-55-201ENST00000520889 XRN1Q8IZH2 1706 aaKnown RBP9.12□□□□□ -0.95
IGHV4-55-201ENST00000520889 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
IGHV4-55-201ENST00000520889 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
IGHV4-55-201ENST00000520889 CPS1P31327 1500 aa9.11□□□□□ -0.95
IGHV4-55-201ENST00000520889 NKTRP30414 1462 aaKnown RBP9.11□□□□□ -0.95
IGHV4-55-201ENST00000520889 RALGAPBQ86X10 1494 aa9.11□□□□□ -0.95
IGHV4-55-201ENST00000520889 ZEB1P37275 1124 aaPredicted RBP9.11□□□□□ -0.95
IGHV4-55-201ENST00000520889 KDM2AQ9Y2K7 1162 aa9.11□□□□□ -0.95
IGHV4-55-201ENST00000520889 TECPR2O15040 1411 aa9.11□□□□□ -0.95
IGHV4-55-201ENST00000520889 NCOA3Q9Y6Q9 1424 aa9.11□□□□□ -0.95
IGHV4-55-201ENST00000520889 DLC1Q96QB1 1528 aa9.1□□□□□ -0.95
IGHV4-55-201ENST00000520889 KCNA6P17658 529 aa9.1□□□□□ -0.95
IGHV4-55-201ENST00000520889 NUTM2DQ5VT03 806 aaPredicted RBP9.1□□□□□ -0.95
IGHV4-55-201ENST00000520889 ABCC11Q96J66 1382 aa9.1□□□□□ -0.95
IGHV4-55-201ENST00000520889 ASXL1Q8IXJ9 1541 aa9.1□□□□□ -0.95
IGHV4-55-201ENST00000520889 STRCP1A6NGW2 1772 aa9.09□□□□□ -0.95
IGHV4-55-201ENST00000520889 PTCH1Q13635 1447 aa9.09□□□□□ -0.95
IGHV4-55-201ENST00000520889 BCANQ96GW7 911 aa9.09□□□□□ -0.95
IGHV4-55-201ENST00000520889 METP08581 1390 aa9.09□□□□□ -0.95
IGHV4-55-201ENST00000520889 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
IGHV4-55-201ENST00000520889 IQSEC2Q5JU85 1478 aa9.08□□□□□ -0.96
IGHV4-55-201ENST00000520889 FAM135BQ49AJ0 1406 aa9.08□□□□□ -0.96
IGHV4-55-201ENST00000520889 YTHDC2Q9H6S0 1430 aaKnown RBP9.08□□□□□ -0.96
IGHV4-55-201ENST00000520889 NBPF8Q3BBV2 869 aa9.08□□□□□ -0.96
IGHV4-55-201ENST00000520889 CFAP70Q5T0N1 1121 aa9.08□□□□□ -0.96
IGHV4-55-201ENST00000520889 SLC26A8Q96RN1 970 aa9.08□□□□□ -0.96
IGHV4-55-201ENST00000520889 LTBP4Q8N2S1 1624 aa9.08□□□□□ -0.96
IGHV4-55-201ENST00000520889 PTPRUQ92729 1446 aa9.07□□□□□ -0.96
IGHV4-55-201ENST00000520889 ARHGEF28Q8N1W1 1705 aaKnown RBP9.07□□□□□ -0.96
IGHV4-55-201ENST00000520889 AMOTL2Q9Y2J4 779 aa9.06□□□□□ -0.96
IGHV4-55-201ENST00000520889 ROCK2O75116 1388 aaKnown RBP9.06□□□□□ -0.96
IGHV4-55-201ENST00000520889 XIRP1Q702N8 1843 aaKnown RBP9.05□□□□□ -0.96
IGHV4-55-201ENST00000520889 EIF3AQ14152 1382 aaKnown RBP9.05□□□□□ -0.96
IGHV4-55-201ENST00000520889 SLC24A1O60721 1099 aa9.05□□□□□ -0.96
IGHV4-55-201ENST00000520889 NBPF1Q3BBV0 1214 aa9.04□□□□□ -0.96
IGHV4-55-201ENST00000520889 LRRC7Q96NW7 1537 aa9.04□□□□□ -0.96
IGHV4-55-201ENST00000520889 ZNF335Q9H4Z2 1342 aaPredicted RBP9.04□□□□□ -0.96
IGHV4-55-201ENST00000520889 ADGRB2O60241 1585 aa9.03□□□□□ -0.96
IGHV4-55-201ENST00000520889 SBNO2Q9Y2G9 1366 aa9.03□□□□□ -0.96
IGHV4-55-201ENST00000520889 TMEM132EQ6IEE7 984 aa9.03□□□□□ -0.96
IGHV4-55-201ENST00000520889 DCCP43146 1447 aa9.03□□□□□ -0.96
IGHV4-55-201ENST00000520889 CARD11Q9BXL7 1154 aa9.02□□□□□ -0.97
IGHV4-55-201ENST00000520889 ROBO2Q9HCK4 1378 aa9.01□□□□□ -0.97
IGHV4-55-201ENST00000520889 QRICH2Q9H0J4 1663 aa9.01□□□□□ -0.97
IGHV4-55-201ENST00000520889 CDC42BPGQ6DT37 1551 aa9.01□□□□□ -0.97
IGHV4-55-201ENST00000520889 PROSER2Q86WR7 435 aaPredicted RBP9.01□□□□□ -0.97
IGHV4-55-201ENST00000520889 ADGRL3Q9HAR2 1447 aa9.01□□□□□ -0.97
IGHV4-55-201ENST00000520889 NALCNQ8IZF0 1738 aa9□□□□□ -0.97
IGHV4-55-201ENST00000520889 SIPA1L2Q9P2F8 1722 aaPredicted RBP9□□□□□ -0.97
IGHV4-55-201ENST00000520889 TMEM94Q12767 1356 aa8.99□□□□□ -0.97
IGHV4-55-201ENST00000520889 PUS7Q96PZ0 661 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms