RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 PLXNC1O60486 1568 aa7.04□□□□□ -1.28
CLINT1-202ENST00000518855 FAM163AQ96GL9 167 aaPredicted RBP7.03□□□□□ -1.28
CLINT1-202ENST00000518855 CABP2Q9NPB3 220 aa7.03□□□□□ -1.28
CLINT1-202ENST00000518855 PLEKHH2Q8IVE3 1493 aa7.03□□□□□ -1.28
CLINT1-202ENST00000518855 PRDM15P57071 1507 aaPredicted RBP7.03□□□□□ -1.28
CLINT1-202ENST00000518855 PREX2Q70Z35 1606 aa7.03□□□□□ -1.28
CLINT1-202ENST00000518855 PDAP1Q13442 181 aaKnown RBP7.03□□□□□ -1.28
CLINT1-202ENST00000518855 IQGAP3Q86VI3 1631 aa7.03□□□□□ -1.28
CLINT1-202ENST00000518855 GPATCH8Q9UKJ3 1502 aaKnown RBP7.03□□□□□ -1.28
CLINT1-202ENST00000518855 MAGI2Q86UL8 1455 aa7.03□□□□□ -1.28
CLINT1-202ENST00000518855 KIF7Q2M1P5 1343 aa7.03□□□□□ -1.28
CLINT1-202ENST00000518855 DPY19L2Q6NUT2 758 aa7.03□□□□□ -1.28
CLINT1-202ENST00000518855 ATP10AO60312 1499 aa7.02□□□□□ -1.29
CLINT1-202ENST00000518855 POTEGQ6S5H5 508 aa7.02□□□□□ -1.29
CLINT1-202ENST00000518855 SYNJ2O15056 1496 aa7.02□□□□□ -1.29
CLINT1-202ENST00000518855 MAGI1Q96QZ7 1491 aaPredicted RBP7.02□□□□□ -1.29
CLINT1-202ENST00000518855 HNRNPUQ00839 825 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLINT1-202ENST00000518855 SLAIN1Q8ND83 568 aa7.02□□□□□ -1.29
CLINT1-202ENST00000518855 ZNF608Q9ULD9 1512 aaPredicted RBP7.01□□□□□ -1.29
CLINT1-202ENST00000518855 GOLGA2Q08379 1002 aa7.01□□□□□ -1.29
CLINT1-202ENST00000518855 MKRN3Q13064 507 aaKnown RBP7.01□□□□□ -1.29
CLINT1-202ENST00000518855 GRIN2AQ12879 1464 aa7.01□□□□□ -1.29
CLINT1-202ENST00000518855 BRD4O60885 1362 aaPredicted RBP7.01□□□□□ -1.29
CLINT1-202ENST00000518855 C11orf95C9JLR9 678 aaPredicted RBP7.01□□□□□ -1.29
CLINT1-202ENST00000518855 L3MBTL2Q969R5 705 aa7.01□□□□□ -1.29
CLINT1-202ENST00000518855 BCANQ96GW7 911 aa7.01□□□□□ -1.29
CLINT1-202ENST00000518855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLINT1-202ENST00000518855 GPRASP1Q5JY77 1395 aa7.01□□□□□ -1.29
CLINT1-202ENST00000518855 IQGAP1P46940 1657 aa7.01□□□□□ -1.29
CLINT1-202ENST00000518855 KIAA1210Q9ULL0 1709 aa7□□□□□ -1.29
CLINT1-202ENST00000518855 BLMP54132 1417 aaPredicted RBP7□□□□□ -1.29
CLINT1-202ENST00000518855 CDC42BPBQ9Y5S2 1711 aa7□□□□□ -1.29
CLINT1-202ENST00000518855 NUDCQ9Y266 331 aa7□□□□□ -1.29
CLINT1-202ENST00000518855 NBPF8Q3BBV2 869 aa6.99□□□□□ -1.29
CLINT1-202ENST00000518855 TDRD9Q8NDG6 1382 aaKnown RBP6.99□□□□□ -1.29
CLINT1-202ENST00000518855 NUP160Q12769 1436 aa6.99□□□□□ -1.29
CLINT1-202ENST00000518855 PARD3Q8TEW0 1356 aa6.98□□□□□ -1.29
CLINT1-202ENST00000518855 CCDC184Q52MB2 194 aa6.98□□□□□ -1.29
CLINT1-202ENST00000518855 ILDR1Q86SU0 546 aaPredicted RBP6.98□□□□□ -1.29
CLINT1-202ENST00000518855 USP47Q96K76 1375 aa6.97□□□□□ -1.29
CLINT1-202ENST00000518855 KIF15Q9NS87 1388 aa6.97□□□□□ -1.29
CLINT1-202ENST00000518855 WASHC2CQ9Y4E1 1318 aa6.97□□□□□ -1.29
CLINT1-202ENST00000518855 COL17A1Q9UMD9 1497 aaPredicted RBP6.97□□□□□ -1.29
CLINT1-202ENST00000518855 SPHKAPQ2M3C7 1700 aa6.97□□□□□ -1.29
CLINT1-202ENST00000518855 EFCAB3Q8N7B9 438 aa6.97□□□□□ -1.29
CLINT1-202ENST00000518855 CEP152O94986 1710 aa6.96□□□□□ -1.29
CLINT1-202ENST00000518855 P3H3Q8IVL6 736 aa6.96□□□□□ -1.29
CLINT1-202ENST00000518855 SHROOM2Q13796 1616 aa6.96□□□□□ -1.3
CLINT1-202ENST00000518855 CCDC141Q6ZP82 1450 aa6.96□□□□□ -1.3
CLINT1-202ENST00000518855 PNISRQ8TF01 805 aaKnown RBP6.96□□□□□ -1.3
CLINT1-202ENST00000518855 ABCC2Q92887 1545 aa6.96□□□□□ -1.3
CLINT1-202ENST00000518855 SAMD9LQ8IVG5 1584 aa6.96□□□□□ -1.3
CLINT1-202ENST00000518855 DEPDC5O75140 1603 aa6.96□□□□□ -1.3
CLINT1-202ENST00000518855 MYOM1P52179 1685 aa6.96□□□□□ -1.3
CLINT1-202ENST00000518855 HIRIP3Q9BW71 556 aaPredicted RBP6.95□□□□□ -1.3
CLINT1-202ENST00000518855 NOP58Q9Y2X3 529 aaKnown RBP6.95□□□□□ -1.3
CLINT1-202ENST00000518855 SYNMO15061 1565 aa6.95□□□□□ -1.3
CLINT1-202ENST00000518855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.95□□□□□ -1.3
CLINT1-202ENST00000518855 ZFP91Q96JP5 570 aaPredicted RBP6.95□□□□□ -1.3
CLINT1-202ENST00000518855 FAM135AQ9P2D6 1515 aa6.95□□□□□ -1.3
CLINT1-202ENST00000518855 RIOK3O14730 519 aaKnown RBP6.95□□□□□ -1.3
CLINT1-202ENST00000518855 MS4A1P11836 297 aa6.95□□□□□ -1.3
CLINT1-202ENST00000518855 PDE3BQ13370 1112 aa6.95□□□□□ -1.3
CLINT1-202ENST00000518855 USP35Q9P2H5 1018 aa6.95□□□□□ -1.3
CLINT1-202ENST00000518855 ANKRD30AQ9BXX3 1397 aa6.94□□□□□ -1.3
CLINT1-202ENST00000518855 ST18O60284 1047 aa6.94□□□□□ -1.3
CLINT1-202ENST00000518855 IPO9Q96P70 1041 aaKnown RBP6.94□□□□□ -1.3
CLINT1-202ENST00000518855 CCDC144AA2RUR9 1427 aa6.94□□□□□ -1.3
CLINT1-202ENST00000518855 PRAG1Q86YV5 1406 aa6.94□□□□□ -1.3
CLINT1-202ENST00000518855 MYO3AQ8NEV4 1616 aa6.94□□□□□ -1.3
CLINT1-202ENST00000518855 RALBP1Q15311 655 aa6.94□□□□□ -1.3
CLINT1-202ENST00000518855 MRS2Q9HD23 443 aa6.94□□□□□ -1.3
CLINT1-202ENST00000518855 DUOX2Q9NRD8 1548 aa6.94□□□□□ -1.3
CLINT1-202ENST00000518855 ANKRD50Q9ULJ7 1429 aa6.94□□□□□ -1.3
CLINT1-202ENST00000518855 MADDQ8WXG6 1647 aa6.93□□□□□ -1.3
CLINT1-202ENST00000518855 PKD2Q13563 968 aa6.93□□□□□ -1.3
CLINT1-202ENST00000518855 IFT172Q9UG01 1749 aa6.93□□□□□ -1.3
CLINT1-202ENST00000518855 PLSCR2Q9NRY7 297 aa6.93□□□□□ -1.3
CLINT1-202ENST00000518855 C9orf84Q5VXU9 1444 aa6.93□□□□□ -1.3
CLINT1-202ENST00000518855 MYBBP1AQ9BQG0 1328 aaKnown RBP6.93□□□□□ -1.3
CLINT1-202ENST00000518855 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.92□□□□□ -1.3
CLINT1-202ENST00000518855 RRP7BPQ9NSQ0 103 aa6.92□□□□□ -1.3
CLINT1-202ENST00000518855 ARAP3Q8WWN8 1544 aa6.91□□□□□ -1.3
CLINT1-202ENST00000518855 TCERG1O14776 1098 aaKnown RBP6.91□□□□□ -1.3
CLINT1-202ENST00000518855 C3orf67Q6ZVT6 689 aa6.91□□□□□ -1.3
CLINT1-202ENST00000518855 USP32Q8NFA0 1604 aa6.9□□□□□ -1.3
CLINT1-202ENST00000518855 PRG4Q92954 1404 aaPredicted RBP6.9□□□□□ -1.3
CLINT1-202ENST00000518855 DEKP35659 375 aaKnown RBP6.9□□□□□ -1.3
CLINT1-202ENST00000518855 RGL2O15211 777 aa6.9□□□□□ -1.31
CLINT1-202ENST00000518855 MS4A4AQ96JQ5 239 aa6.9□□□□□ -1.31
CLINT1-202ENST00000518855 ZC3H13Q5T200 1668 aaKnown RBP6.9□□□□□ -1.31
CLINT1-202ENST00000518855 ZMYM3Q14202 1370 aa6.89□□□□□ -1.31
CLINT1-202ENST00000518855 NPC1L1Q9UHC9 1359 aa6.89□□□□□ -1.31
CLINT1-202ENST00000518855 VWDEQ8N2E2 1590 aa6.89□□□□□ -1.31
CLINT1-202ENST00000518855 MARVELD3Q96A59 401 aa6.89□□□□□ -1.31
CLINT1-202ENST00000518855 PODXL2Q9NZ53 605 aa6.89□□□□□ -1.31
CLINT1-202ENST00000518855 A2MP01023 1474 aa6.89□□□□□ -1.31
CLINT1-202ENST00000518855 PLA2R1Q13018 1463 aa6.89□□□□□ -1.31
CLINT1-202ENST00000518855 ATP10BO94823 1461 aa6.89□□□□□ -1.31
CLINT1-202ENST00000518855 B4GALNT3Q6L9W6 998 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms