RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 ARHGAP23Q9P227 1491 aa25.81■■□□□ 1.72
TRAM1-202ENST00000518678 SIN3AQ96ST3 1273 aa25.81■■□□□ 1.72
TRAM1-202ENST00000518678 SLIT1O75093 1534 aa25.81■■□□□ 1.72
TRAM1-202ENST00000518678 TMEM2Q9UHN6 1383 aa25.8■■□□□ 1.72
TRAM1-202ENST00000518678 STRCP1A6NGW2 1772 aa25.79■■□□□ 1.72
TRAM1-202ENST00000518678 NPHP4O75161 1426 aaPredicted RBP25.79■■□□□ 1.72
TRAM1-202ENST00000518678 ANKLE2Q86XL3 938 aa25.78■■□□□ 1.72
TRAM1-202ENST00000518678 ZNF326Q5BKZ1 582 aaKnown RBP25.77■■□□□ 1.72
TRAM1-202ENST00000518678 MED14O60244 1454 aa25.77■■□□□ 1.72
TRAM1-202ENST00000518678 IQSEC2Q5JU85 1478 aa25.77■■□□□ 1.72
TRAM1-202ENST00000518678 ZFYVE9O95405 1425 aa25.76■■□□□ 1.71
TRAM1-202ENST00000518678 RIMS2Q9UQ26 1411 aa25.75■■□□□ 1.71
TRAM1-202ENST00000518678 NEXMIFQ5QGS0 1516 aa25.74■■□□□ 1.71
TRAM1-202ENST00000518678 RPGRIP1LQ68CZ1 1315 aa25.74■■□□□ 1.71
TRAM1-202ENST00000518678 NEUROD1Q13562 356 aa25.74■■□□□ 1.71
TRAM1-202ENST00000518678 RGL3Q3MIN7 710 aa25.74■■□□□ 1.71
TRAM1-202ENST00000518678 LTKP29376 864 aa25.71■■□□□ 1.71
TRAM1-202ENST00000518678 HDGFP51858 240 aaKnown RBP25.71■■□□□ 1.71
TRAM1-202ENST00000518678 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.71■■□□□ 1.71
TRAM1-202ENST00000518678 EID1Q9Y6B2 187 aa25.71■■□□□ 1.71
TRAM1-202ENST00000518678 PPLO60437 1756 aa25.71■■□□□ 1.71
TRAM1-202ENST00000518678 IFT172Q9UG01 1749 aa25.71■■□□□ 1.71
TRAM1-202ENST00000518678 SCAF11Q99590 1463 aaKnown RBP25.7■■□□□ 1.7
TRAM1-202ENST00000518678 TXNDC2Q86VQ3 553 aa25.69■■□□□ 1.7
TRAM1-202ENST00000518678 UBAP1LF5GYI3 381 aa25.67■■□□□ 1.7
TRAM1-202ENST00000518678 CPS1P31327 1500 aa25.65■■□□□ 1.7
TRAM1-202ENST00000518678 PPP1R15AO75807 674 aaPredicted RBP25.64■■□□□ 1.7
TRAM1-202ENST00000518678 NUTM2DQ5VT03 806 aaPredicted RBP25.64■■□□□ 1.7
TRAM1-202ENST00000518678 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
TRAM1-202ENST00000518678 VGFO15240 615 aaPredicted RBP25.63■■□□□ 1.69
TRAM1-202ENST00000518678 MYOM2P54296 1465 aa25.63■■□□□ 1.69
TRAM1-202ENST00000518678 PLEKHG1Q9ULL1 1385 aa25.62■■□□□ 1.69
TRAM1-202ENST00000518678 TONSLQ96HA7 1378 aa25.61■■□□□ 1.69
TRAM1-202ENST00000518678 DCAF11Q8TEB1 546 aa25.61■■□□□ 1.69
TRAM1-202ENST00000518678 L3MBTL2Q969R5 705 aa25.61■■□□□ 1.69
TRAM1-202ENST00000518678 STAC3Q96MF2 364 aa25.6■■□□□ 1.69
TRAM1-202ENST00000518678 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
TRAM1-202ENST00000518678 XIRP1Q702N8 1843 aaKnown RBP25.58■■□□□ 1.69
TRAM1-202ENST00000518678 NRXN1Q9ULB1 1477 aa25.58■■□□□ 1.69
TRAM1-202ENST00000518678 ADGRF5Q8IZF2 1346 aa25.58■■□□□ 1.69
TRAM1-202ENST00000518678 LRRC7Q96NW7 1537 aa25.58■■□□□ 1.68
TRAM1-202ENST00000518678 SETBP1Q9Y6X0 1596 aa25.56■■□□□ 1.68
TRAM1-202ENST00000518678 KDM2AQ9Y2K7 1162 aa25.56■■□□□ 1.68
TRAM1-202ENST00000518678 TIMELESSQ9UNS1 1208 aa25.55■■□□□ 1.68
TRAM1-202ENST00000518678 NRXN3Q9Y4C0 1643 aa25.55■■□□□ 1.68
TRAM1-202ENST00000518678 PIP4K2BP78356 416 aa25.54■■□□□ 1.68
TRAM1-202ENST00000518678 PIK3C2GO75747 1445 aa25.54■■□□□ 1.68
TRAM1-202ENST00000518678 BCANQ96GW7 911 aa25.52■■□□□ 1.68
TRAM1-202ENST00000518678 SCAF1Q9H7N4 1312 aaKnown RBP25.52■■□□□ 1.68
TRAM1-202ENST00000518678 ADAMTS13Q76LX8 1427 aa25.51■■□□□ 1.67
TRAM1-202ENST00000518678 DIP2AQ14689 1571 aa25.51■■□□□ 1.67
TRAM1-202ENST00000518678 SLC26A8Q96RN1 970 aa25.49■■□□□ 1.67
TRAM1-202ENST00000518678 PRAG1Q86YV5 1406 aa25.48■■□□□ 1.67
TRAM1-202ENST00000518678 TBX22Q9Y458 520 aa25.47■■□□□ 1.67
TRAM1-202ENST00000518678 SETD1AO15047 1707 aaKnown RBP25.46■■□□□ 1.67
TRAM1-202ENST00000518678 DISP3Q9P2K9 1392 aa25.45■■□□□ 1.67
TRAM1-202ENST00000518678 LAMC1P11047 1609 aa25.45■■□□□ 1.67
TRAM1-202ENST00000518678 HSPA1LP34931 641 aa25.44■■□□□ 1.66
TRAM1-202ENST00000518678 C14orf93Q9H972 538 aaKnown RBP25.44■■□□□ 1.66
TRAM1-202ENST00000518678 RBM33Q96EV2 1170 aaKnown RBP25.43■■□□□ 1.66
TRAM1-202ENST00000518678 KIAA1210Q9ULL0 1709 aa25.42■■□□□ 1.66
TRAM1-202ENST00000518678 TOM1O60784 492 aa25.41■■□□□ 1.66
TRAM1-202ENST00000518678 CFAP70Q5T0N1 1121 aa25.41■■□□□ 1.66
TRAM1-202ENST00000518678 ILDR2Q71H61 639 aa25.41■■□□□ 1.66
TRAM1-202ENST00000518678 NBPF8Q3BBV2 869 aa25.4■■□□□ 1.66
TRAM1-202ENST00000518678 PIK3R4Q99570 1358 aa25.4■■□□□ 1.66
TRAM1-202ENST00000518678 METP08581 1390 aa25.39■■□□□ 1.65
TRAM1-202ENST00000518678 ASXL1Q8IXJ9 1541 aa25.37■■□□□ 1.65
TRAM1-202ENST00000518678 TRPM1Q7Z4N2 1603 aa25.37■■□□□ 1.65
TRAM1-202ENST00000518678 NWD1Q149M9 1564 aa25.37■■□□□ 1.65
TRAM1-202ENST00000518678 CHD2O14647 1828 aaKnown RBP25.35■■□□□ 1.65
TRAM1-202ENST00000518678 ADGRB1O14514 1584 aa25.35■■□□□ 1.65
TRAM1-202ENST00000518678 PTPRUQ92729 1446 aa25.34■■□□□ 1.65
TRAM1-202ENST00000518678 TMEM94Q12767 1356 aa25.33■■□□□ 1.65
TRAM1-202ENST00000518678 KCNA6P17658 529 aa25.32■■□□□ 1.64
TRAM1-202ENST00000518678 TMEM132EQ6IEE7 984 aa25.32■■□□□ 1.64
TRAM1-202ENST00000518678 RALGAPBQ86X10 1494 aa25.32■■□□□ 1.64
TRAM1-202ENST00000518678 XRN1Q8IZH2 1706 aaKnown RBP25.31■■□□□ 1.64
TRAM1-202ENST00000518678 NBPF1Q3BBV0 1214 aa25.3■■□□□ 1.64
TRAM1-202ENST00000518678 AMOTL2Q9Y2J4 779 aa25.29■■□□□ 1.64
TRAM1-202ENST00000518678 LRPPRCP42704 1394 aaKnown RBP25.29■■□□□ 1.64
TRAM1-202ENST00000518678 YTHDC2Q9H6S0 1430 aaKnown RBP25.29■■□□□ 1.64
TRAM1-202ENST00000518678 MED1Q15648 1581 aaPredicted RBP25.28■■□□□ 1.64
TRAM1-202ENST00000518678 PROSER2Q86WR7 435 aaPredicted RBP25.27■■□□□ 1.64
TRAM1-202ENST00000518678 ROCK2O75116 1388 aaKnown RBP25.27■■□□□ 1.64
TRAM1-202ENST00000518678 GPRASP1Q5JY77 1395 aa25.27■■□□□ 1.64
TRAM1-202ENST00000518678 KNDC1Q76NI1 1749 aa25.26■■□□□ 1.63
TRAM1-202ENST00000518678 NKTRP30414 1462 aaKnown RBP25.26■■□□□ 1.63
TRAM1-202ENST00000518678 ABCC11Q96J66 1382 aa25.25■■□□□ 1.63
TRAM1-202ENST00000518678 TECPR2O15040 1411 aa25.25■■□□□ 1.63
TRAM1-202ENST00000518678 STK26Q9P289 416 aa25.23■■□□□ 1.63
TRAM1-202ENST00000518678 PTCH1Q13635 1447 aa25.22■■□□□ 1.63
TRAM1-202ENST00000518678 ROBO1Q9Y6N7 1651 aa25.22■■□□□ 1.63
TRAM1-202ENST00000518678 DLC1Q96QB1 1528 aa25.22■■□□□ 1.63
TRAM1-202ENST00000518678 ROBO2Q9HCK4 1378 aa25.19■■□□□ 1.62
TRAM1-202ENST00000518678 ZEB1P37275 1124 aaPredicted RBP25.19■■□□□ 1.62
TRAM1-202ENST00000518678 SIRT1Q96EB6 747 aa25.19■■□□□ 1.62
TRAM1-202ENST00000518678 CARD11Q9BXL7 1154 aa25.19■■□□□ 1.62
TRAM1-202ENST00000518678 TRAK1Q9UPV9 953 aa25.19■■□□□ 1.62
TRAM1-202ENST00000518678 ARHGEF28Q8N1W1 1705 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms