RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 ADGRF5Q8IZF2 1346 aa22.86■■□□□ 1.25
PCM1-206ENST00000518537 SCAF11Q99590 1463 aaKnown RBP22.85■■□□□ 1.25
PCM1-206ENST00000518537 TESK2Q96S53 571 aa22.85■■□□□ 1.25
PCM1-206ENST00000518537 PPLO60437 1756 aa22.84■■□□□ 1.25
PCM1-206ENST00000518537 ARHGEF40Q8TER5 1519 aa22.84■■□□□ 1.25
PCM1-206ENST00000518537 RPGRIP1LQ68CZ1 1315 aa22.83■■□□□ 1.25
PCM1-206ENST00000518537 PREX1Q8TCU6 1659 aa22.83■■□□□ 1.25
PCM1-206ENST00000518537 NRXN1Q9ULB1 1477 aa22.83■■□□□ 1.24
PCM1-206ENST00000518537 TMF1P82094 1093 aa22.83■■□□□ 1.24
PCM1-206ENST00000518537 CFAP70Q5T0N1 1121 aa22.82■■□□□ 1.24
PCM1-206ENST00000518537 PPP6R1Q9UPN7 881 aa22.82■■□□□ 1.24
PCM1-206ENST00000518537 DISP3Q9P2K9 1392 aa22.81■■□□□ 1.24
PCM1-206ENST00000518537 EIF3AQ14152 1382 aaKnown RBP22.79■■□□□ 1.24
PCM1-206ENST00000518537 SLC52A1Q9NWF4 448 aa22.79■■□□□ 1.24
PCM1-206ENST00000518537 CLTCQ00610 1675 aaKnown RBP22.77■■□□□ 1.24
PCM1-206ENST00000518537 IDI1Q13907 227 aa22.77■■□□□ 1.24
PCM1-206ENST00000518537 CNGB1Q14028 1251 aaPredicted RBP22.75■■□□□ 1.23
PCM1-206ENST00000518537 CCDC184Q52MB2 194 aa22.74■■□□□ 1.23
PCM1-206ENST00000518537 MRS2Q9HD23 443 aa22.74■■□□□ 1.23
PCM1-206ENST00000518537 MLECQ14165 292 aa22.74■■□□□ 1.23
PCM1-206ENST00000518537 PIK3C2GO75747 1445 aa22.74■■□□□ 1.23
PCM1-206ENST00000518537 SETBP1Q9Y6X0 1596 aa22.74■■□□□ 1.23
PCM1-206ENST00000518537 ERVK-7P63135 1459 aa22.73■■□□□ 1.23
PCM1-206ENST00000518537 NEXMIFQ5QGS0 1516 aa22.73■■□□□ 1.23
PCM1-206ENST00000518537 FBXO31Q5XUX0 539 aaPredicted RBP22.72■■□□□ 1.23
PCM1-206ENST00000518537 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
PCM1-206ENST00000518537 CDCA8Q53HL2 280 aa22.7■■□□□ 1.23
PCM1-206ENST00000518537 C14orf93Q9H972 538 aaKnown RBP22.7■■□□□ 1.23
PCM1-206ENST00000518537 MYO5BQ9ULV0 1848 aa22.7■■□□□ 1.22
PCM1-206ENST00000518537 TMEM131LA2VDJ0 1609 aa22.69■■□□□ 1.22
PCM1-206ENST00000518537 SLC24A1O60721 1099 aa22.67■■□□□ 1.22
PCM1-206ENST00000518537 KTN1Q86UP2 1357 aaKnown RBP22.67■■□□□ 1.22
PCM1-206ENST00000518537 ESF1Q9H501 851 aaKnown RBP22.67■■□□□ 1.22
PCM1-206ENST00000518537 NUTM2DQ5VT03 806 aaPredicted RBP22.66■■□□□ 1.22
PCM1-206ENST00000518537 MYO3AQ8NEV4 1616 aa22.66■■□□□ 1.22
PCM1-206ENST00000518537 HNRNPUQ00839 825 aaKnown RBP eCLIP22.65■■□□□ 1.22
PCM1-206ENST00000518537 RALBP1Q15311 655 aa22.65■■□□□ 1.22
PCM1-206ENST00000518537 FAM9BQ8IZU0 186 aa22.65■■□□□ 1.22
PCM1-206ENST00000518537 PANK3Q9H999 370 aa22.65■■□□□ 1.22
PCM1-206ENST00000518537 SPATA31D1Q6ZQQ2 1576 aa22.64■■□□□ 1.21
PCM1-206ENST00000518537 ZFYVE9O95405 1425 aa22.64■■□□□ 1.21
PCM1-206ENST00000518537 ADGRB1O14514 1584 aa22.64■■□□□ 1.21
PCM1-206ENST00000518537 KDM5AP29375 1690 aaKnown RBP22.63■■□□□ 1.21
PCM1-206ENST00000518537 PER1O15534 1290 aaPredicted RBP22.63■■□□□ 1.21
PCM1-206ENST00000518537 STAG3Q9UJ98 1225 aa22.63■■□□□ 1.21
PCM1-206ENST00000518537 TRAK1Q9UPV9 953 aa22.61■■□□□ 1.21
PCM1-206ENST00000518537 TMEM132EQ6IEE7 984 aa22.6■■□□□ 1.21
PCM1-206ENST00000518537 MYBBP1AQ9BQG0 1328 aaKnown RBP22.6■■□□□ 1.21
PCM1-206ENST00000518537 CENPJQ9HC77 1338 aaPredicted RBP22.6■■□□□ 1.21
PCM1-206ENST00000518537 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
PCM1-206ENST00000518537 SBNO2Q9Y2G9 1366 aa22.58■■□□□ 1.21
PCM1-206ENST00000518537 ZMYM3Q14202 1370 aa22.57■■□□□ 1.2
PCM1-206ENST00000518537 PARD3Q8TEW0 1356 aa22.57■■□□□ 1.2
PCM1-206ENST00000518537 TMC1Q8TDI8 760 aa22.57■■□□□ 1.2
PCM1-206ENST00000518537 MYOM1P52179 1685 aa22.57■■□□□ 1.2
PCM1-206ENST00000518537 QRICH2Q9H0J4 1663 aa22.57■■□□□ 1.2
PCM1-206ENST00000518537 BRD4O60885 1362 aaPredicted RBP22.55■■□□□ 1.2
PCM1-206ENST00000518537 CC2D1BQ5T0F9 858 aaKnown RBP22.53■■□□□ 1.2
PCM1-206ENST00000518537 A2ML1A8K2U0 1454 aa22.53■■□□□ 1.2
PCM1-206ENST00000518537 KNSTRNQ9Y448 316 aa22.52■■□□□ 1.2
PCM1-206ENST00000518537 ARHGEF28Q8N1W1 1705 aaKnown RBP22.52■■□□□ 1.2
PCM1-206ENST00000518537 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
PCM1-206ENST00000518537 NLRP13Q86W25 1043 aa22.5■■□□□ 1.19
PCM1-206ENST00000518537 PNISRQ8TF01 805 aaKnown RBP22.49■■□□□ 1.19
PCM1-206ENST00000518537 ASXL1Q8IXJ9 1541 aa22.49■■□□□ 1.19
PCM1-206ENST00000518537 RIMS2Q9UQ26 1411 aa22.49■■□□□ 1.19
PCM1-206ENST00000518537 TNRQ92752 1358 aa22.47■■□□□ 1.19
PCM1-206ENST00000518537 ALKQ9UM73 1620 aa22.46■■□□□ 1.19
PCM1-206ENST00000518537 STK26Q9P289 416 aa22.45■■□□□ 1.18
PCM1-206ENST00000518537 ZBED9Q6R2W3 1325 aa22.45■■□□□ 1.18
PCM1-206ENST00000518537 AMER1Q5JTC6 1135 aaPredicted RBP22.43■■□□□ 1.18
PCM1-206ENST00000518537 YTHDC2Q9H6S0 1430 aaKnown RBP22.42■■□□□ 1.18
PCM1-206ENST00000518537 EVC2Q86UK5 1308 aa22.42■■□□□ 1.18
PCM1-206ENST00000518537 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.42■■□□□ 1.18
PCM1-206ENST00000518537 LRPPRCP42704 1394 aaKnown RBP22.41■■□□□ 1.18
PCM1-206ENST00000518537 NPC1L1Q9UHC9 1359 aa22.4■■□□□ 1.18
PCM1-206ENST00000518537 PUS7Q96PZ0 661 aaKnown RBP22.39■■□□□ 1.17
PCM1-206ENST00000518537 TULP4Q9NRJ4 1543 aa22.38■■□□□ 1.17
PCM1-206ENST00000518537 PTPRMP28827 1452 aa22.38■■□□□ 1.17
PCM1-206ENST00000518537 HDGFP51858 240 aaKnown RBP22.38■■□□□ 1.17
PCM1-206ENST00000518537 SAFB2Q14151 953 aaKnown RBP eCLIP22.38■■□□□ 1.17
PCM1-206ENST00000518537 POGKQ9P215 609 aa22.36■■□□□ 1.17
PCM1-206ENST00000518537 UBR1Q8IWV7 1749 aa22.36■■□□□ 1.17
PCM1-206ENST00000518537 FER1L4A9Z1Z3 1794 aa22.36■■□□□ 1.17
PCM1-206ENST00000518537 CARD14Q9BXL6 1004 aa22.35■■□□□ 1.17
PCM1-206ENST00000518537 SUPT16HQ9Y5B9 1047 aaKnown RBP22.35■■□□□ 1.17
PCM1-206ENST00000518537 SETD1AO15047 1707 aaKnown RBP22.35■■□□□ 1.17
PCM1-206ENST00000518537 PRAM1Q96QH2 718 aa22.35■■□□□ 1.17
PCM1-206ENST00000518537 PPP2R1AP30153 589 aa22.34■■□□□ 1.17
PCM1-206ENST00000518537 C3P01024 1663 aa22.34■■□□□ 1.17
PCM1-206ENST00000518537 NEFLP07196 543 aa22.33■■□□□ 1.17
PCM1-206ENST00000518537 SLC12A5Q9H2X9 1139 aa22.33■■□□□ 1.17
PCM1-206ENST00000518537 CEBPAP49715 358 aaPredicted RBP22.33■■□□□ 1.16
PCM1-206ENST00000518537 NLRP1Q9C000 1473 aa22.33■■□□□ 1.16
PCM1-206ENST00000518537 NRXN3Q9Y4C0 1643 aa22.32■■□□□ 1.16
PCM1-206ENST00000518537 CABP2Q9NPB3 220 aa22.31■■□□□ 1.16
PCM1-206ENST00000518537 MINK1Q8N4C8 1332 aaPredicted RBP22.31■■□□□ 1.16
PCM1-206ENST00000518537 TMEM2Q9UHN6 1383 aa22.31■■□□□ 1.16
PCM1-206ENST00000518537 DLC1Q96QB1 1528 aa22.3■■□□□ 1.16
PCM1-206ENST00000518537 NSD3Q9BZ95 1437 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms