RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 PREX1Q8TCU6 1659 aa32.53■■■□□ 2.8
SLIT3-204ENST00000518140 CFAP70Q5T0N1 1121 aa32.52■■■□□ 2.8
SLIT3-204ENST00000518140 SLC52A1Q9NWF4 448 aa32.52■■■□□ 2.8
SLIT3-204ENST00000518140 IFT172Q9UG01 1749 aa32.51■■■□□ 2.79
SLIT3-204ENST00000518140 LAMC1P11047 1609 aa32.51■■■□□ 2.79
SLIT3-204ENST00000518140 ANP32CO43423 234 aa32.5■■■□□ 2.79
SLIT3-204ENST00000518140 POLR1AO95602 1720 aaPredicted RBP32.49■■■□□ 2.79
SLIT3-204ENST00000518140 ERVK-7P63135 1459 aa32.48■■■□□ 2.79
SLIT3-204ENST00000518140 NUTM2DQ5VT03 806 aaPredicted RBP32.47■■■□□ 2.79
SLIT3-204ENST00000518140 NRXN1Q9ULB1 1477 aa32.46■■■□□ 2.79
SLIT3-204ENST00000518140 RPGRIP1LQ68CZ1 1315 aa32.45■■■□□ 2.79
SLIT3-204ENST00000518140 TESK2Q96S53 571 aa32.45■■■□□ 2.79
SLIT3-204ENST00000518140 ESF1Q9H501 851 aaKnown RBP32.42■■■□□ 2.78
SLIT3-204ENST00000518140 ZMYM3Q14202 1370 aa32.42■■■□□ 2.78
SLIT3-204ENST00000518140 PPLO60437 1756 aa32.42■■■□□ 2.78
SLIT3-204ENST00000518140 KIAA1210Q9ULL0 1709 aa32.37■■■□□ 2.77
SLIT3-204ENST00000518140 GTF3C3Q9Y5Q9 886 aa32.37■■■□□ 2.77
SLIT3-204ENST00000518140 NEXMIFQ5QGS0 1516 aa32.36■■■□□ 2.77
SLIT3-204ENST00000518140 SCAF11Q99590 1463 aaKnown RBP32.36■■■□□ 2.77
SLIT3-204ENST00000518140 PIK3C2GO75747 1445 aa32.36■■■□□ 2.77
SLIT3-204ENST00000518140 TMEM131LA2VDJ0 1609 aa32.36■■■□□ 2.77
SLIT3-204ENST00000518140 IQGAP1P46940 1657 aa32.35■■■□□ 2.77
SLIT3-204ENST00000518140 C14orf93Q9H972 538 aaKnown RBP32.35■■■□□ 2.77
SLIT3-204ENST00000518140 DISP3Q9P2K9 1392 aa32.35■■■□□ 2.77
SLIT3-204ENST00000518140 SPATA31D1Q6ZQQ2 1576 aa32.34■■■□□ 2.77
SLIT3-204ENST00000518140 MYO5BQ9ULV0 1848 aa32.34■■■□□ 2.77
SLIT3-204ENST00000518140 VGFO15240 615 aaPredicted RBP32.33■■■□□ 2.77
SLIT3-204ENST00000518140 SENP3Q9H4L4 574 aaPredicted RBP32.32■■■□□ 2.76
SLIT3-204ENST00000518140 CCER2I3L3R5 266 aa32.3■■■□□ 2.76
SLIT3-204ENST00000518140 TMEM132EQ6IEE7 984 aa32.3■■■□□ 2.76
SLIT3-204ENST00000518140 STAG3Q9UJ98 1225 aa32.3■■■□□ 2.76
SLIT3-204ENST00000518140 TMF1P82094 1093 aa32.26■■■□□ 2.75
SLIT3-204ENST00000518140 PRKRIP1Q9H875 184 aaPredicted RBP32.24■■■□□ 2.75
SLIT3-204ENST00000518140 CEBPAP49715 358 aaPredicted RBP32.23■■■□□ 2.75
SLIT3-204ENST00000518140 ZFYVE9O95405 1425 aa32.23■■■□□ 2.75
SLIT3-204ENST00000518140 A2ML1A8K2U0 1454 aa32.21■■■□□ 2.75
SLIT3-204ENST00000518140 ADGRB1O14514 1584 aa32.21■■■□□ 2.75
SLIT3-204ENST00000518140 TRAK1Q9UPV9 953 aa32.2■■■□□ 2.75
SLIT3-204ENST00000518140 SETBP1Q9Y6X0 1596 aa32.2■■■□□ 2.75
SLIT3-204ENST00000518140 EIF3AQ14152 1382 aaKnown RBP32.2■■■□□ 2.74
SLIT3-204ENST00000518140 CNGB1Q14028 1251 aaPredicted RBP32.2■■■□□ 2.74
SLIT3-204ENST00000518140 TNRQ92752 1358 aa32.18■■■□□ 2.74
SLIT3-204ENST00000518140 CCDC184Q52MB2 194 aa32.14■■■□□ 2.74
SLIT3-204ENST00000518140 PLPPR3Q6T4P5 718 aa32.14■■■□□ 2.74
SLIT3-204ENST00000518140 RIMS2Q9UQ26 1411 aa32.11■■■□□ 2.73
SLIT3-204ENST00000518140 CENPJQ9HC77 1338 aaPredicted RBP32.08■■■□□ 2.73
SLIT3-204ENST00000518140 PANK3Q9H999 370 aa32.07■■■□□ 2.73
SLIT3-204ENST00000518140 PER1O15534 1290 aaPredicted RBP32.07■■■□□ 2.72
SLIT3-204ENST00000518140 ASXL1Q8IXJ9 1541 aa32.06■■■□□ 2.72
SLIT3-204ENST00000518140 STK26Q9P289 416 aa32.05■■■□□ 2.72
SLIT3-204ENST00000518140 MYO3AQ8NEV4 1616 aa32.03■■■□□ 2.72
SLIT3-204ENST00000518140 CDCA8Q53HL2 280 aa32.03■■■□□ 2.72
SLIT3-204ENST00000518140 FER1L4A9Z1Z3 1794 aa32.02■■■□□ 2.72
SLIT3-204ENST00000518140 C3P01024 1663 aa32.02■■■□□ 2.72
SLIT3-204ENST00000518140 ALKQ9UM73 1620 aa32■■■□□ 2.71
SLIT3-204ENST00000518140 SBNO2Q9Y2G9 1366 aa31.99■■■□□ 2.71
SLIT3-204ENST00000518140 SLC24A1O60721 1099 aa31.96■■■□□ 2.71
SLIT3-204ENST00000518140 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.96■■■□□ 2.71
SLIT3-204ENST00000518140 SAFB2Q14151 953 aaKnown RBP eCLIP31.95■■■□□ 2.71
SLIT3-204ENST00000518140 UBR1Q8IWV7 1749 aa31.95■■■□□ 2.7
SLIT3-204ENST00000518140 MRS2Q9HD23 443 aa31.95■■■□□ 2.7
SLIT3-204ENST00000518140 PTPRMP28827 1452 aa31.94■■■□□ 2.7
SLIT3-204ENST00000518140 TMEM2Q9UHN6 1383 aa31.94■■■□□ 2.7
SLIT3-204ENST00000518140 YTHDC2Q9H6S0 1430 aaKnown RBP31.94■■■□□ 2.7
SLIT3-204ENST00000518140 QRICH2Q9H0J4 1663 aa31.93■■■□□ 2.7
SLIT3-204ENST00000518140 ARHGEF28Q8N1W1 1705 aaKnown RBP31.93■■■□□ 2.7
SLIT3-204ENST00000518140 NLRP1Q9C000 1473 aa31.92■■■□□ 2.7
SLIT3-204ENST00000518140 KDM5AP29375 1690 aaKnown RBP31.89■■■□□ 2.7
SLIT3-204ENST00000518140 LTKP29376 864 aa31.88■■■□□ 2.69
SLIT3-204ENST00000518140 HDGFP51858 240 aaKnown RBP31.88■■■□□ 2.69
SLIT3-204ENST00000518140 CC2D1BQ5T0F9 858 aaKnown RBP31.88■■■□□ 2.69
SLIT3-204ENST00000518140 MYOM1P52179 1685 aa31.88■■■□□ 2.69
SLIT3-204ENST00000518140 PRAM1Q96QH2 718 aa31.87■■■□□ 2.69
SLIT3-204ENST00000518140 NRXN3Q9Y4C0 1643 aa31.86■■■□□ 2.69
SLIT3-204ENST00000518140 RALBP1Q15311 655 aa31.86■■■□□ 2.69
SLIT3-204ENST00000518140 KTN1Q86UP2 1357 aaKnown RBP31.84■■■□□ 2.69
SLIT3-204ENST00000518140 METP08581 1390 aa31.84■■■□□ 2.69
SLIT3-204ENST00000518140 FAM9BQ8IZU0 186 aa31.84■■■□□ 2.69
SLIT3-204ENST00000518140 BCANQ96GW7 911 aa31.84■■■□□ 2.69
SLIT3-204ENST00000518140 SETD1AO15047 1707 aaKnown RBP31.83■■■□□ 2.69
SLIT3-204ENST00000518140 PARD3Q8TEW0 1356 aa31.83■■■□□ 2.69
SLIT3-204ENST00000518140 POGKQ9P215 609 aa31.82■■■□□ 2.68
SLIT3-204ENST00000518140 TXNDC2Q86VQ3 553 aa31.82■■■□□ 2.68
SLIT3-204ENST00000518140 KNSTRNQ9Y448 316 aa31.82■■■□□ 2.68
SLIT3-204ENST00000518140 RIMS1Q86UR5 1692 aaKnown RBP31.81■■■□□ 2.68
SLIT3-204ENST00000518140 TULP4Q9NRJ4 1543 aa31.8■■■□□ 2.68
SLIT3-204ENST00000518140 EVC2Q86UK5 1308 aa31.8■■■□□ 2.68
SLIT3-204ENST00000518140 MYBBP1AQ9BQG0 1328 aaKnown RBP31.8■■■□□ 2.68
SLIT3-204ENST00000518140 CARD14Q9BXL6 1004 aa31.8■■■□□ 2.68
SLIT3-204ENST00000518140 LRPPRCP42704 1394 aaKnown RBP31.79■■■□□ 2.68
SLIT3-204ENST00000518140 MINK1Q8N4C8 1332 aaPredicted RBP31.79■■■□□ 2.68
SLIT3-204ENST00000518140 WAPLQ7Z5K2 1190 aa31.79■■■□□ 2.68
SLIT3-204ENST00000518140 SLC12A5Q9H2X9 1139 aa31.79■■■□□ 2.68
SLIT3-204ENST00000518140 AMER1Q5JTC6 1135 aaPredicted RBP31.79■■■□□ 2.68
SLIT3-204ENST00000518140 CABP2Q9NPB3 220 aa31.78■■■□□ 2.68
SLIT3-204ENST00000518140 TMC1Q8TDI8 760 aa31.77■■■□□ 2.68
SLIT3-204ENST00000518140 ADAMTSL3P82987 1691 aa31.76■■■□□ 2.67
SLIT3-204ENST00000518140 ABCC11Q96J66 1382 aa31.75■■■□□ 2.67
SLIT3-204ENST00000518140 THEMISQ8N1K5 641 aaPredicted RBP31.74■■■□□ 2.67
SLIT3-204ENST00000518140 PLEKHH1Q9ULM0 1364 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms