RNA–Protein interactions for RNA: ENST00000518098.1

LINCR-0001-202, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-202ENST00000518098 SRCAPQ6ZRS2 3230 aa9.4□□□□□ -0.9
LINCR-0001-202ENST00000518098 RBM6P78332 1123 aaKnown RBP9.4□□□□□ -0.9
LINCR-0001-202ENST00000518098 TRIM52Q96A61 297 aa9.4□□□□□ -0.9
LINCR-0001-202ENST00000518098 LRRC59Q96AG4 307 aaKnown RBP9.4□□□□□ -0.9
LINCR-0001-202ENST00000518098 ZRANB1Q9UGI0 708 aa9.4□□□□□ -0.9
LINCR-0001-202ENST00000518098 MAP3K1Q13233 1512 aa9.4□□□□□ -0.91
LINCR-0001-202ENST00000518098 TET3O43151 1660 aa9.39□□□□□ -0.91
LINCR-0001-202ENST00000518098 NWD1Q149M9 1564 aa9.39□□□□□ -0.91
LINCR-0001-202ENST00000518098 LMTK2Q8IWU2 1503 aa9.39□□□□□ -0.91
LINCR-0001-202ENST00000518098 RPRD2Q5VT52 1461 aaKnown RBP9.38□□□□□ -0.91
LINCR-0001-202ENST00000518098 DCCP43146 1447 aa9.38□□□□□ -0.91
LINCR-0001-202ENST00000518098 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
LINCR-0001-202ENST00000518098 PHLPP1O60346 1717 aa9.37□□□□□ -0.91
LINCR-0001-202ENST00000518098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINCR-0001-202ENST00000518098 ANKRD30AQ9BXX3 1397 aa9.37□□□□□ -0.91
LINCR-0001-202ENST00000518098 AHDC1Q5TGY3 1603 aaPredicted RBP9.36□□□□□ -0.91
LINCR-0001-202ENST00000518098 NOS1P29475 1434 aa9.36□□□□□ -0.91
LINCR-0001-202ENST00000518098 MROH1Q8NDA8 1641 aa9.35□□□□□ -0.91
LINCR-0001-202ENST00000518098 MSH5O43196 834 aa9.35□□□□□ -0.91
LINCR-0001-202ENST00000518098 SETD5Q9C0A6 1442 aa9.35□□□□□ -0.91
LINCR-0001-202ENST00000518098 ADGRB3O60242 1522 aa9.35□□□□□ -0.91
LINCR-0001-202ENST00000518098 PIK3C2BO00750 1634 aa9.34□□□□□ -0.91
LINCR-0001-202ENST00000518098 AFF2P51816 1311 aa9.34□□□□□ -0.91
LINCR-0001-202ENST00000518098 XIRP1Q702N8 1843 aaKnown RBP9.34□□□□□ -0.91
LINCR-0001-202ENST00000518098 QTRT2Q9H974 415 aaKnown RBP9.34□□□□□ -0.91
LINCR-0001-202ENST00000518098 RRP7BPQ9NSQ0 103 aa9.34□□□□□ -0.91
LINCR-0001-202ENST00000518098 COL16A1Q07092 1604 aaPredicted RBP9.34□□□□□ -0.91
LINCR-0001-202ENST00000518098 NUTM2BA6NNL0 878 aaPredicted RBP9.33□□□□□ -0.92
LINCR-0001-202ENST00000518098 NUTM2EB1AL46 878 aaPredicted RBP9.33□□□□□ -0.92
LINCR-0001-202ENST00000518098 APLP2Q06481 763 aa9.33□□□□□ -0.92
LINCR-0001-202ENST00000518098 NUTM2DQ5VT03 806 aaPredicted RBP9.33□□□□□ -0.92
LINCR-0001-202ENST00000518098 BRINP3Q76B58 766 aa9.33□□□□□ -0.92
LINCR-0001-202ENST00000518098 NUTM2AQ8IVF1 878 aaPredicted RBP9.33□□□□□ -0.92
LINCR-0001-202ENST00000518098 PIAS4Q8N2W9 510 aaPredicted RBP9.33□□□□□ -0.92
LINCR-0001-202ENST00000518098 DIP2AQ14689 1571 aa9.33□□□□□ -0.92
LINCR-0001-202ENST00000518098 SHPRHQ149N8 1683 aa9.32□□□□□ -0.92
LINCR-0001-202ENST00000518098 RBM33Q96EV2 1170 aaKnown RBP9.32□□□□□ -0.92
LINCR-0001-202ENST00000518098 TRPC5Q9UL62 973 aaPredicted RBP9.32□□□□□ -0.92
LINCR-0001-202ENST00000518098 ZFYVE9O95405 1425 aa9.31□□□□□ -0.92
LINCR-0001-202ENST00000518098 RIMS2Q9UQ26 1411 aa9.31□□□□□ -0.92
LINCR-0001-202ENST00000518098 LRP6O75581 1613 aa9.31□□□□□ -0.92
LINCR-0001-202ENST00000518098 ADRA2BP18089 450 aa9.3□□□□□ -0.92
LINCR-0001-202ENST00000518098 C8orf37Q96NL8 207 aa9.3□□□□□ -0.92
LINCR-0001-202ENST00000518098 ABCC5O15440 1437 aa9.3□□□□□ -0.92
LINCR-0001-202ENST00000518098 VPS8Q8N3P4 1428 aa9.3□□□□□ -0.92
LINCR-0001-202ENST00000518098 CEP152O94986 1710 aa9.29□□□□□ -0.92
LINCR-0001-202ENST00000518098 AMOTL2Q9Y2J4 779 aa9.29□□□□□ -0.92
LINCR-0001-202ENST00000518098 SETD1AO15047 1707 aaKnown RBP9.28□□□□□ -0.92
LINCR-0001-202ENST00000518098 DAPK1P53355 1430 aa9.28□□□□□ -0.92
LINCR-0001-202ENST00000518098 TRPM2O94759 1503 aa9.27□□□□□ -0.93
LINCR-0001-202ENST00000518098 FNBP4Q8N3X1 1017 aaPredicted RBP9.27□□□□□ -0.93
LINCR-0001-202ENST00000518098 USP21Q9UK80 565 aa9.27□□□□□ -0.93
LINCR-0001-202ENST00000518098 RGS12O14924 1447 aa9.27□□□□□ -0.93
LINCR-0001-202ENST00000518098 PTCH1Q13635 1447 aa9.27□□□□□ -0.93
LINCR-0001-202ENST00000518098 PTPN23Q9H3S7 1636 aa9.26□□□□□ -0.93
LINCR-0001-202ENST00000518098 CHD2O14647 1828 aaKnown RBP9.26□□□□□ -0.93
LINCR-0001-202ENST00000518098 ASXL1Q8IXJ9 1541 aa9.26□□□□□ -0.93
LINCR-0001-202ENST00000518098 ADAMTS13Q76LX8 1427 aa9.25□□□□□ -0.93
LINCR-0001-202ENST00000518098 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
LINCR-0001-202ENST00000518098 SF3B2Q13435 895 aaKnown RBP9.25□□□□□ -0.93
LINCR-0001-202ENST00000518098 PNPLA6Q8IY17 1366 aa9.24□□□□□ -0.93
LINCR-0001-202ENST00000518098 ANKRD50Q9ULJ7 1429 aa9.24□□□□□ -0.93
LINCR-0001-202ENST00000518098 MST1RQ04912 1400 aa9.23□□□□□ -0.93
LINCR-0001-202ENST00000518098 ADGRL2O95490 1459 aa9.23□□□□□ -0.93
LINCR-0001-202ENST00000518098 LRPPRCP42704 1394 aaKnown RBP9.23□□□□□ -0.93
LINCR-0001-202ENST00000518098 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.22□□□□□ -0.93
LINCR-0001-202ENST00000518098 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
LINCR-0001-202ENST00000518098 ADGRL3Q9HAR2 1447 aa9.22□□□□□ -0.93
LINCR-0001-202ENST00000518098 ADAMTS2O95450 1211 aa9.21□□□□□ -0.94
LINCR-0001-202ENST00000518098 CHIC2Q9UKJ5 165 aa9.21□□□□□ -0.94
LINCR-0001-202ENST00000518098 SOS2Q07890 1332 aaPredicted RBP9.21□□□□□ -0.94
LINCR-0001-202ENST00000518098 BLMP54132 1417 aaPredicted RBP9.21□□□□□ -0.94
LINCR-0001-202ENST00000518098 CFAP65Q6ZU64 1925 aaKnown RBP9.21□□□□□ -0.94
LINCR-0001-202ENST00000518098 TMEM131LA2VDJ0 1609 aa9.2□□□□□ -0.94
LINCR-0001-202ENST00000518098 NPHP3Q7Z494 1330 aa9.2□□□□□ -0.94
LINCR-0001-202ENST00000518098 CROCC2H7BZ55 1655 aa9.2□□□□□ -0.94
LINCR-0001-202ENST00000518098 GJD4Q96KN9 370 aaPredicted RBP9.19□□□□□ -0.94
LINCR-0001-202ENST00000518098 ATRNO75882 1429 aa9.19□□□□□ -0.94
LINCR-0001-202ENST00000518098 ZNF326Q5BKZ1 582 aaKnown RBP9.18□□□□□ -0.94
LINCR-0001-202ENST00000518098 NHSL1Q5SYE7 1610 aa9.18□□□□□ -0.94
LINCR-0001-202ENST00000518098 SETBP1Q9Y6X0 1596 aa9.17□□□□□ -0.94
LINCR-0001-202ENST00000518098 C1orf167Q5SNV9 1468 aa9.17□□□□□ -0.94
LINCR-0001-202ENST00000518098 VGFO15240 615 aaPredicted RBP9.17□□□□□ -0.94
LINCR-0001-202ENST00000518098 PTPRUQ92729 1446 aa9.16□□□□□ -0.94
LINCR-0001-202ENST00000518098 ROCK1Q13464 1354 aa9.16□□□□□ -0.94
LINCR-0001-202ENST00000518098 EP400Q96L91 3159 aa9.16□□□□□ -0.94
LINCR-0001-202ENST00000518098 HFM1A2PYH4 1435 aa9.15□□□□□ -0.94
LINCR-0001-202ENST00000518098 DCAF8L1A6NGE4 600 aa9.15□□□□□ -0.94
LINCR-0001-202ENST00000518098 BAG6P46379 1132 aa9.15□□□□□ -0.94
LINCR-0001-202ENST00000518098 UNC5CLQ8IV45 518 aa9.15□□□□□ -0.94
LINCR-0001-202ENST00000518098 PRAG1Q86YV5 1406 aa9.14□□□□□ -0.95
LINCR-0001-202ENST00000518098 GCC2Q8IWJ2 1684 aa9.14□□□□□ -0.95
LINCR-0001-202ENST00000518098 RPGRIP1LQ68CZ1 1315 aa9.14□□□□□ -0.95
LINCR-0001-202ENST00000518098 LAMC1P11047 1609 aa9.14□□□□□ -0.95
LINCR-0001-202ENST00000518098 NUP155O75694 1391 aa9.13□□□□□ -0.95
LINCR-0001-202ENST00000518098 UNC13BO14795 1591 aa9.13□□□□□ -0.95
LINCR-0001-202ENST00000518098 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
LINCR-0001-202ENST00000518098 FAM50AQ14320 339 aaKnown RBP9.13□□□□□ -0.95
LINCR-0001-202ENST00000518098 XRN1Q8IZH2 1706 aaKnown RBP9.13□□□□□ -0.95
LINCR-0001-202ENST00000518098 IQGAP3Q86VI3 1631 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms