RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 ABCA8O94911 1581 aa19.63■□□□□ 0.73
PCM1-204ENST00000517730 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
PCM1-204ENST00000517730 USP19O94966 1318 aa19.62■□□□□ 0.73
PCM1-204ENST00000517730 MYO5CQ9NQX4 1742 aa19.61■□□□□ 0.73
PCM1-204ENST00000517730 HNRNPMP52272 730 aaKnown RBP eCLIP19.61■□□□□ 0.73
PCM1-204ENST00000517730 RNF17Q9BXT8 1623 aaKnown RBP19.61■□□□□ 0.73
PCM1-204ENST00000517730 NINLQ9Y2I6 1382 aa19.61■□□□□ 0.73
PCM1-204ENST00000517730 MAGI2Q86UL8 1455 aa19.61■□□□□ 0.73
PCM1-204ENST00000517730 ABCC2Q92887 1545 aa19.6■□□□□ 0.73
PCM1-204ENST00000517730 CGNL1Q0VF96 1302 aa19.6■□□□□ 0.73
PCM1-204ENST00000517730 NGEFQ8N5V2 710 aa19.59■□□□□ 0.73
PCM1-204ENST00000517730 ATP10AO60312 1499 aa19.59■□□□□ 0.73
PCM1-204ENST00000517730 ATP10BO94823 1461 aa19.59■□□□□ 0.73
PCM1-204ENST00000517730 CDCA8Q53HL2 280 aa19.58■□□□□ 0.73
PCM1-204ENST00000517730 AMER1Q5JTC6 1135 aaPredicted RBP19.58■□□□□ 0.73
PCM1-204ENST00000517730 SYNMO15061 1565 aa19.58■□□□□ 0.73
PCM1-204ENST00000517730 PDE3AQ14432 1141 aa19.58■□□□□ 0.72
PCM1-204ENST00000517730 NPC1L1Q9UHC9 1359 aa19.58■□□□□ 0.72
PCM1-204ENST00000517730 ASXL1Q8IXJ9 1541 aa19.57■□□□□ 0.72
PCM1-204ENST00000517730 E9PSI1 815 aa19.57■□□□□ 0.72
PCM1-204ENST00000517730 POGKQ9P215 609 aa19.56■□□□□ 0.72
PCM1-204ENST00000517730 IQGAP3Q86VI3 1631 aa19.56■□□□□ 0.72
PCM1-204ENST00000517730 ZMYM3Q14202 1370 aa19.55■□□□□ 0.72
PCM1-204ENST00000517730 MAST1Q9Y2H9 1570 aa19.55■□□□□ 0.72
PCM1-204ENST00000517730 SAMD9LQ8IVG5 1584 aa19.54■□□□□ 0.72
PCM1-204ENST00000517730 IGHDP01880 384 aa19.54■□□□□ 0.72
PCM1-204ENST00000517730 AAMPQ13685 434 aa19.52■□□□□ 0.72
PCM1-204ENST00000517730 PLXNC1O60486 1568 aa19.52■□□□□ 0.72
PCM1-204ENST00000517730 BCAR3O75815 825 aa19.52■□□□□ 0.71
PCM1-204ENST00000517730 CLUAP1Q96AJ1 413 aa19.52■□□□□ 0.71
PCM1-204ENST00000517730 NLRP1Q9C000 1473 aa19.52■□□□□ 0.71
PCM1-204ENST00000517730 PREX2Q70Z35 1606 aa19.51■□□□□ 0.71
PCM1-204ENST00000517730 ANTXR1Q9H6X2 564 aa19.51■□□□□ 0.71
PCM1-204ENST00000517730 UPF2Q9HAU5 1272 aaKnown RBP19.51■□□□□ 0.71
PCM1-204ENST00000517730 IQGAP1P46940 1657 aa19.51■□□□□ 0.71
PCM1-204ENST00000517730 JPH4Q96JJ6 628 aa19.51■□□□□ 0.71
PCM1-204ENST00000517730 CHMP7Q8WUX9 453 aaPredicted RBP19.5■□□□□ 0.71
PCM1-204ENST00000517730 SPINK5Q9NQ38 1064 aaPredicted RBP19.49■□□□□ 0.71
PCM1-204ENST00000517730 APAF1O14727 1248 aa19.49■□□□□ 0.71
PCM1-204ENST00000517730 SEC24BO95487 1268 aa19.48■□□□□ 0.71
PCM1-204ENST00000517730 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
PCM1-204ENST00000517730 SLKQ9H2G2 1235 aaPredicted RBP19.48■□□□□ 0.71
PCM1-204ENST00000517730 RRAGDQ9NQL2 400 aaPredicted RBP19.48■□□□□ 0.71
PCM1-204ENST00000517730 CDC42BPBQ9Y5S2 1711 aa19.47■□□□□ 0.71
PCM1-204ENST00000517730 PMFBP1Q8TBY8 1022 aa19.47■□□□□ 0.71
PCM1-204ENST00000517730 CENPJQ9HC77 1338 aaPredicted RBP19.47■□□□□ 0.71
PCM1-204ENST00000517730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.46■□□□□ 0.713e-9■■□□□ 13
PCM1-204ENST00000517730 MADDQ8WXG6 1647 aa19.46■□□□□ 0.71
PCM1-204ENST00000517730 STAC3Q96MF2 364 aa19.46■□□□□ 0.71
PCM1-204ENST00000517730 SCAF11Q99590 1463 aaKnown RBP19.45■□□□□ 0.7
PCM1-204ENST00000517730 TBC1D32Q96NH3 1257 aa19.45■□□□□ 0.7
PCM1-204ENST00000517730 CANXP27824 592 aaKnown RBP19.45■□□□□ 0.7
PCM1-204ENST00000517730 SCAPERQ9BY12 1400 aa19.45■□□□□ 0.7
PCM1-204ENST00000517730 GOLGA6L3A6NEY3 463 aa19.44■□□□□ 0.7
PCM1-204ENST00000517730 SYCP2Q9BX26 1530 aa19.43■□□□□ 0.7
PCM1-204ENST00000517730 DUOX2Q9NRD8 1548 aa19.42■□□□□ 0.7
PCM1-204ENST00000517730 MYOM1P52179 1685 aa19.42■□□□□ 0.7
PCM1-204ENST00000517730 FSD2A1L4K1 749 aa19.42■□□□□ 0.7
PCM1-204ENST00000517730 COG6Q9Y2V7 657 aa19.42■□□□□ 0.7
PCM1-204ENST00000517730 TBC1D2Q9BYX2 928 aa19.41■□□□□ 0.7
PCM1-204ENST00000517730 GLIPR1L2Q4G1C9 344 aa19.41■□□□□ 0.7
PCM1-204ENST00000517730 SLC24A1O60721 1099 aa19.4■□□□□ 0.7
PCM1-204ENST00000517730 PANK1Q8TE04 598 aa19.4■□□□□ 0.7
PCM1-204ENST00000517730 XRCC6P12956 609 aaKnown RBP eCLIP19.39■□□□□ 0.69
PCM1-204ENST00000517730 CLCN1P35523 988 aa19.39■□□□□ 0.69
PCM1-204ENST00000517730 MCM4P33991 863 aa19.38■□□□□ 0.69
PCM1-204ENST00000517730 KDM5AP29375 1690 aaKnown RBP19.38■□□□□ 0.69
PCM1-204ENST00000517730 ERCC6Q03468 1493 aa19.37■□□□□ 0.69
PCM1-204ENST00000517730 WWC1Q8IX03 1113 aa19.36■□□□□ 0.69
PCM1-204ENST00000517730 PNNQ9H307 717 aaKnown RBP19.36■□□□□ 0.69
PCM1-204ENST00000517730 DMRT2Q9Y5R5 561 aa19.36■□□□□ 0.69
PCM1-204ENST00000517730 SPHKAPQ2M3C7 1700 aa19.36■□□□□ 0.69
PCM1-204ENST00000517730 TTC37Q6PGP7 1564 aa19.36■□□□□ 0.69
PCM1-204ENST00000517730 ARHGAP5Q13017 1502 aa19.36■□□□□ 0.69
PCM1-204ENST00000517730 RWDD1Q9H446 243 aaPredicted RBP19.35■□□□□ 0.69
PCM1-204ENST00000517730 POLR3AO14802 1390 aaPredicted RBP19.35■□□□□ 0.69
PCM1-204ENST00000517730 CHMP5Q9NZZ3 219 aa19.34■□□□□ 0.69
PCM1-204ENST00000517730 PDZRN3Q9UPQ7 1066 aa19.34■□□□□ 0.69
PCM1-204ENST00000517730 ISY1Q9ULR0 285 aaKnown RBP19.33■□□□□ 0.69
PCM1-204ENST00000517730 MRE11P49959 708 aa19.33■□□□□ 0.68
PCM1-204ENST00000517730 RARSP54136 660 aaKnown RBP19.33■□□□□ 0.68
PCM1-204ENST00000517730 FBLN2P98095 1184 aa19.33■□□□□ 0.68
PCM1-204ENST00000517730 PCDHB15Q9Y5E8 787 aa19.32■□□□□ 0.68
PCM1-204ENST00000517730 TRPM2O94759 1503 aa19.31■□□□□ 0.68
PCM1-204ENST00000517730 NAP1L5Q96NT1 182 aaPredicted RBP19.31■□□□□ 0.68
PCM1-204ENST00000517730 KIAA1210Q9ULL0 1709 aa19.31■□□□□ 0.68
PCM1-204ENST00000517730 CEP152O94986 1710 aa19.3■□□□□ 0.68
PCM1-204ENST00000517730 TRAK2O60296 914 aa19.3■□□□□ 0.68
PCM1-204ENST00000517730 DDX11L8A8MPP1 907 aa19.28■□□□□ 0.68
PCM1-204ENST00000517730 WDR63Q8IWG1 891 aa19.28■□□□□ 0.68
PCM1-204ENST00000517730 RRP9O43818 475 aaKnown RBP19.27■□□□□ 0.68
PCM1-204ENST00000517730 HSP90AA1P07900 732 aaKnown RBP19.27■□□□□ 0.68
PCM1-204ENST00000517730 RUNDC1Q96C34 613 aa19.27■□□□□ 0.68
PCM1-204ENST00000517730 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
PCM1-204ENST00000517730 PANK2Q9BZ23 570 aa19.26■□□□□ 0.67
PCM1-204ENST00000517730 C22orf23Q9BZE7 217 aa19.26■□□□□ 0.67
PCM1-204ENST00000517730 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.26■□□□□ 0.67
PCM1-204ENST00000517730 PTPRTO14522 1441 aa19.26■□□□□ 0.67
PCM1-204ENST00000517730 KANK1Q14678 1352 aa19.26■□□□□ 0.67
PCM1-204ENST00000517730 RTEL1-TNFRSF6BF6WH68 1400 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms