RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 TOR4AQ9NXH8 423 aa1.84□□□□□ -2.11
SNORA40.16-201ENST00000517238 PKD2L1Q9P0L9 805 aa1.84□□□□□ -2.11
SNORA40.16-201ENST00000517238 SEMA6BQ9H3T3 888 aa1.83□□□□□ -2.12
SNORA40.16-201ENST00000517238 WDR26Q9H7D7 661 aa1.83□□□□□ -2.12
SNORA40.16-201ENST00000517238 ZNF454Q8N9F8 522 aa1.82□□□□□ -2.12
SNORA40.16-201ENST00000517238 ZBTB47Q9UFB7 747 aaPredicted RBP1.82□□□□□ -2.12
SNORA40.16-201ENST00000517238 C2orf72A6NCS6 295 aa1.81□□□□□ -2.12
SNORA40.16-201ENST00000517238 PHF20L1A8MW92 1017 aa1.81□□□□□ -2.12
SNORA40.16-201ENST00000517238 ARHGEF15O94989 841 aa1.81□□□□□ -2.12
SNORA40.16-201ENST00000517238 PDAP1Q13442 181 aaKnown RBP1.81□□□□□ -2.12
SNORA40.16-201ENST00000517238 FOXD4L6Q3SYB3 417 aaPredicted RBP1.81□□□□□ -2.12
SNORA40.16-201ENST00000517238 FOXD4L3Q6VB84 417 aaPredicted RBP1.81□□□□□ -2.12
SNORA40.16-201ENST00000517238 CNTNAP3BQ96NU0 1288 aa1.81□□□□□ -2.12
SNORA40.16-201ENST00000517238 CNTNAP3Q9BZ76 1288 aa1.81□□□□□ -2.12
SNORA40.16-201ENST00000517238 TTC24A2A3L6 582 aaPredicted RBP1.8□□□□□ -2.12
SNORA40.16-201ENST00000517238 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
SNORA40.16-201ENST00000517238 ANKLE1Q8NAG6 615 aa1.8□□□□□ -2.12
SNORA40.16-201ENST00000517238 KIF3CO14782 793 aa1.79□□□□□ -2.12
SNORA40.16-201ENST00000517238 PROX2Q3B8N5 592 aa1.79□□□□□ -2.12
SNORA40.16-201ENST00000517238 WHAMMQ8TF30 809 aa1.79□□□□□ -2.12
SNORA40.16-201ENST00000517238 SEPT9Q9UHD8 586 aaPredicted RBP1.79□□□□□ -2.12
SNORA40.16-201ENST00000517238 PPEF1O14829 653 aaPredicted RBP1.78□□□□□ -2.12
SNORA40.16-201ENST00000517238 KRT76Q01546 638 aa1.78□□□□□ -2.12
SNORA40.16-201ENST00000517238 PLCD3Q8N3E9 789 aa1.78□□□□□ -2.12
SNORA40.16-201ENST00000517238 COL17A1Q9UMD9 1497 aaPredicted RBP1.77□□□□□ -2.13
SNORA40.16-201ENST00000517238 COPS2P61201 443 aa1.77□□□□□ -2.13
SNORA40.16-201ENST00000517238 AVENQ9NQS1 362 aaPredicted RBP1.77□□□□□ -2.13
SNORA40.16-201ENST00000517238 CNTNAP5Q8WYK1 1306 aa1.76□□□□□ -2.13
SNORA40.16-201ENST00000517238 KRTAP9-7A8MTY7 169 aa1.76□□□□□ -2.13
SNORA40.16-201ENST00000517238 FAM98CQ17RN3 349 aaKnown RBP1.76□□□□□ -2.13
SNORA40.16-201ENST00000517238 PODNQ7Z5L7 613 aa1.76□□□□□ -2.13
SNORA40.16-201ENST00000517238 EFCAB3Q8N7B9 438 aa1.76□□□□□ -2.13
SNORA40.16-201ENST00000517238 RNF114Q9Y508 228 aa1.76□□□□□ -2.13
SNORA40.16-201ENST00000517238 BMP1P13497 986 aa1.75□□□□□ -2.13
SNORA40.16-201ENST00000517238 PTCD2Q8WV60 388 aaKnown RBP1.75□□□□□ -2.13
SNORA40.16-201ENST00000517238 KRTAP9-3Q9BYQ3 159 aa1.75□□□□□ -2.13
SNORA40.16-201ENST00000517238 KIAA1468Q9P260 1216 aa1.75□□□□□ -2.13
SNORA40.16-201ENST00000517238 KRBA1A5PL33 1030 aa1.74□□□□□ -2.13
SNORA40.16-201ENST00000517238 SMPD1P17405 629 aa1.74□□□□□ -2.13
SNORA40.16-201ENST00000517238 MAP3K10Q02779 954 aa1.74□□□□□ -2.13
SNORA40.16-201ENST00000517238 BEND7Q8N7W2 519 aaPredicted RBP1.74□□□□□ -2.13
SNORA40.16-201ENST00000517238 CIZ1Q9ULV3 898 aaPredicted RBP1.74□□□□□ -2.13
SNORA40.16-201ENST00000517238 PPP1R3GB7ZBB8 358 aa1.73□□□□□ -2.13
SNORA40.16-201ENST00000517238 TBC1D12O60347 775 aa1.73□□□□□ -2.13
SNORA40.16-201ENST00000517238 ZPR1O75312 459 aa1.73□□□□□ -2.13
SNORA40.16-201ENST00000517238 LRP8Q14114 963 aa1.73□□□□□ -2.13
SNORA40.16-201ENST00000517238 JAG2Q9Y219 1238 aa1.73□□□□□ -2.13
SNORA40.16-201ENST00000517238 FBLN7Q53RD9 439 aa1.72□□□□□ -2.13
SNORA40.16-201ENST00000517238 PLA2G2CQ5R387 149 aa1.72□□□□□ -2.13
SNORA40.16-201ENST00000517238 HPS1Q92902 700 aa1.72□□□□□ -2.13
SNORA40.16-201ENST00000517238 MS4A4AQ96JQ5 239 aa1.72□□□□□ -2.13
SNORA40.16-201ENST00000517238 S1PR4O95977 384 aa1.71□□□□□ -2.14
SNORA40.16-201ENST00000517238 TRIM46Q7Z4K8 759 aa1.71□□□□□ -2.14
SNORA40.16-201ENST00000517238 TMC2Q8TDI7 906 aa1.71□□□□□ -2.14
SNORA40.16-201ENST00000517238 COL25A1Q9BXS0 654 aaPredicted RBP1.71□□□□□ -2.14
SNORA40.16-201ENST00000517238 ENAMQ9NRM1 1142 aa1.71□□□□□ -2.14
SNORA40.16-201ENST00000517238 NCANO14594 1321 aa1.7□□□□□ -2.14
SNORA40.16-201ENST00000517238 PRRG2O14669 202 aa1.7□□□□□ -2.14
SNORA40.16-201ENST00000517238 HYAL3O43820 417 aaPredicted RBP1.7□□□□□ -2.14
SNORA40.16-201ENST00000517238 APLP1P51693 650 aa1.7□□□□□ -2.14
SNORA40.16-201ENST00000517238 FOSBP53539 338 aa1.7□□□□□ -2.14
SNORA40.16-201ENST00000517238 DOC2BQ14184 412 aa1.7□□□□□ -2.14
SNORA40.16-201ENST00000517238 GPR161Q8N6U8 529 aaKnown RBP1.7□□□□□ -2.14
SNORA40.16-201ENST00000517238 SNIP1Q8TAD8 396 aaKnown RBP1.7□□□□□ -2.14
SNORA40.16-201ENST00000517238 CSRNP1Q96S65 589 aa1.7□□□□□ -2.14
SNORA40.16-201ENST00000517238 ADAM33Q9BZ11 813 aa1.7□□□□□ -2.14
SNORA40.16-201ENST00000517238 J3QL48 77 aa1.69□□□□□ -2.14
SNORA40.16-201ENST00000517238 PPFIA3O75145 1194 aa1.69□□□□□ -2.14
SNORA40.16-201ENST00000517238 COL9A3Q14050 684 aaPredicted RBP1.69□□□□□ -2.14
SNORA40.16-201ENST00000517238 ZDHHC16Q969W1 377 aa1.69□□□□□ -2.14
SNORA40.16-201ENST00000517238 SOBPA7XYQ1 873 aa1.68□□□□□ -2.14
SNORA40.16-201ENST00000517238 RNF40O75150 1001 aa1.68□□□□□ -2.14
SNORA40.16-201ENST00000517238 RNFT1Q5M7Z0 435 aa1.68□□□□□ -2.14
SNORA40.16-201ENST00000517238 LYPD4Q6UWN0 246 aa1.68□□□□□ -2.14
SNORA40.16-201ENST00000517238 ZFP42Q96MM3 310 aa1.68□□□□□ -2.14
SNORA40.16-201ENST00000517238 ZBTB22O15209 634 aa1.67□□□□□ -2.14
SNORA40.16-201ENST00000517238 TLL1O43897 1013 aa1.67□□□□□ -2.14
SNORA40.16-201ENST00000517238 CD2BP2O95400 341 aaKnown RBP1.67□□□□□ -2.14
SNORA40.16-201ENST00000517238 SAMD7Q7Z3H4 446 aa1.67□□□□□ -2.14
SNORA40.16-201ENST00000517238 B8ZZF3 427 aa1.66□□□□□ -2.14
SNORA40.16-201ENST00000517238 BUD31P41223 144 aaPredicted RBP1.66□□□□□ -2.14
SNORA40.16-201ENST00000517238 IRAK1P51617 712 aa1.66□□□□□ -2.14
SNORA40.16-201ENST00000517238 C1QTNF9BB2RNN3 333 aa1.65□□□□□ -2.15
SNORA40.16-201ENST00000517238 SOX12O15370 315 aa1.65□□□□□ -2.15
SNORA40.16-201ENST00000517238 CHRM1P11229 460 aaPredicted RBP1.65□□□□□ -2.15
SNORA40.16-201ENST00000517238 TAL1P17542 331 aaPredicted RBP1.65□□□□□ -2.15
SNORA40.16-201ENST00000517238 KRTAP5-9P26371 169 aa1.65□□□□□ -2.15
SNORA40.16-201ENST00000517238 RPIAP49247 311 aa1.65□□□□□ -2.15
SNORA40.16-201ENST00000517238 ALYREFQ86V81 257 aaKnown RBP1.65□□□□□ -2.15
SNORA40.16-201ENST00000517238 NEDD1Q8NHV4 660 aa1.65□□□□□ -2.15
SNORA40.16-201ENST00000517238 JPH4Q96JJ6 628 aa1.65□□□□□ -2.15
SNORA40.16-201ENST00000517238 PHF8Q9UPP1 1060 aa1.65□□□□□ -2.15
SNORA40.16-201ENST00000517238 ONECUT3O60422 494 aaPredicted RBP1.64□□□□□ -2.15
SNORA40.16-201ENST00000517238 CELA2BP08218 269 aaPredicted RBP1.64□□□□□ -2.15
SNORA40.16-201ENST00000517238 ZNF865P0CJ78 1059 aaPredicted RBP1.64□□□□□ -2.15
SNORA40.16-201ENST00000517238 CAPN5O15484 640 aaPredicted RBP1.63□□□□□ -2.15
SNORA40.16-201ENST00000517238 ADAMTS2O95450 1211 aa1.63□□□□□ -2.15
SNORA40.16-201ENST00000517238 SPOCD1Q6ZMY3 1216 aa1.63□□□□□ -2.15
SNORA40.16-201ENST00000517238 C8AP07357 584 aa1.62□□□□□ -2.15
SNORA40.16-201ENST00000517238 GSE1Q14687 1217 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms