RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.22□□□□□ -1.73
SCARNA3-201ENST00000517097 GPCPD1Q9NPB8 672 aa4.22□□□□□ -1.73
SCARNA3-201ENST00000517097 POLR3EQ9NVU0 708 aa4.22□□□□□ -1.73
SCARNA3-201ENST00000517097 ACIN1Q9UKV3 1341 aaKnown RBP4.21□□□□□ -1.73
SCARNA3-201ENST00000517097 IGSF3O75054 1194 aa4.21□□□□□ -1.74
SCARNA3-201ENST00000517097 BANK1Q8NDB2 785 aa4.21□□□□□ -1.74
SCARNA3-201ENST00000517097 UPF1Q92900 1129 aaKnown RBP eCLIP4.21□□□□□ -1.74
SCARNA3-201ENST00000517097 SNRKQ9NRH2 765 aa4.21□□□□□ -1.74
SCARNA3-201ENST00000517097 TBC1D12O60347 775 aa4.2□□□□□ -1.74
SCARNA3-201ENST00000517097 RFC5P40937 340 aa4.2□□□□□ -1.74
SCARNA3-201ENST00000517097 PDE4CQ08493 712 aa4.2□□□□□ -1.74
SCARNA3-201ENST00000517097 MYSM1Q5VVJ2 828 aa4.2□□□□□ -1.74
SCARNA3-201ENST00000517097 ARHGAP33O14559 1287 aa4.19□□□□□ -1.74
SCARNA3-201ENST00000517097 CLK2P49760 499 aaKnown RBP4.19□□□□□ -1.74
SCARNA3-201ENST00000517097 PSEN2P49810 448 aa4.19□□□□□ -1.74
SCARNA3-201ENST00000517097 DMRTA1Q5VZB9 504 aa4.19□□□□□ -1.74
SCARNA3-201ENST00000517097 CALR3Q96L12 384 aaKnown RBP4.19□□□□□ -1.74
SCARNA3-201ENST00000517097 PHOX2BQ99453 314 aa4.19□□□□□ -1.74
SCARNA3-201ENST00000517097 FAM217BQ9NTX9 383 aaPredicted RBP4.19□□□□□ -1.74
SCARNA3-201ENST00000517097 PSDA5PKW4 1024 aaPredicted RBP4.18□□□□□ -1.74
SCARNA3-201ENST00000517097 PATL2C9JE40 543 aaKnown RBP4.18□□□□□ -1.74
SCARNA3-201ENST00000517097 E9PSI1 815 aa4.18□□□□□ -1.74
SCARNA3-201ENST00000517097 FBXO31Q5XUX0 539 aaPredicted RBP4.18□□□□□ -1.74
SCARNA3-201ENST00000517097 ADGRD1Q6QNK2 874 aa4.18□□□□□ -1.74
SCARNA3-201ENST00000517097 CDHR5Q9HBB8 845 aa4.18□□□□□ -1.74
SCARNA3-201ENST00000517097 GDPD2Q9HCC8 539 aa4.18□□□□□ -1.74
SCARNA3-201ENST00000517097 NPDC1Q9NQX5 325 aaPredicted RBP4.18□□□□□ -1.74
SCARNA3-201ENST00000517097 POM121CA8CG34 1229 aa4.17□□□□□ -1.74
SCARNA3-201ENST00000517097 EVI5O60447 810 aa4.17□□□□□ -1.74
SCARNA3-201ENST00000517097 KCNA1Q09470 495 aa4.17□□□□□ -1.74
SCARNA3-201ENST00000517097 TMEM259Q4ZIN3 620 aa4.17□□□□□ -1.74
SCARNA3-201ENST00000517097 PPP4R3BQ5MIZ7 849 aa4.17□□□□□ -1.74
SCARNA3-201ENST00000517097 WWC1Q8IX03 1113 aa4.17□□□□□ -1.74
SCARNA3-201ENST00000517097 HRO43593 1189 aa4.16□□□□□ -1.74
SCARNA3-201ENST00000517097 BRD1O95696 1058 aa4.16□□□□□ -1.74
SCARNA3-201ENST00000517097 PPP2R2DQ66LE6 453 aa4.16□□□□□ -1.74
SCARNA3-201ENST00000517097 MTMR14Q8NCE2 650 aa4.16□□□□□ -1.74
SCARNA3-201ENST00000517097 GLMNQ92990 594 aa4.16□□□□□ -1.74
SCARNA3-201ENST00000517097 TK2O00142 265 aa4.15□□□□□ -1.75
SCARNA3-201ENST00000517097 ABL2P42684 1182 aa4.15□□□□□ -1.75
SCARNA3-201ENST00000517097 EN1Q05925 392 aaPredicted RBP4.15□□□□□ -1.75
SCARNA3-201ENST00000517097 NLRP7Q8WX94 980 aa4.15□□□□□ -1.75
SCARNA3-201ENST00000517097 KCNK17Q96T54 332 aa4.15□□□□□ -1.75
SCARNA3-201ENST00000517097 TBC1D2Q9BYX2 928 aa4.15□□□□□ -1.75
SCARNA3-201ENST00000517097 LIMD1Q9UGP4 676 aa4.15□□□□□ -1.75
SCARNA3-201ENST00000517097 DIXDC1Q155Q3 683 aa4.14□□□□□ -1.75
SCARNA3-201ENST00000517097 METTL3Q86U44 580 aaKnown RBP4.14□□□□□ -1.75
SCARNA3-201ENST00000517097 ZNF454Q8N9F8 522 aa4.14□□□□□ -1.75
SCARNA3-201ENST00000517097 PBXIP1Q96AQ6 731 aa4.14□□□□□ -1.75
SCARNA3-201ENST00000517097 TBC1D2BQ9UPU7 963 aa4.14□□□□□ -1.75
SCARNA3-201ENST00000517097 USTQ9Y2C2 406 aa4.14□□□□□ -1.75
SCARNA3-201ENST00000517097 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 SOCS7O14512 581 aa4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 MAP3K7O43318 606 aa4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 OATP04181 439 aa4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 RFX1P22670 979 aa4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 FOSBP53539 338 aa4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 FAM161AQ3B820 660 aa4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 RIC3Q7Z5B4 369 aa4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 EPAS1Q99814 870 aa4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 ANO8Q9HCE9 1232 aaPredicted RBP4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 PRM3Q9NNZ6 103 aa4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 AMOTL2Q9Y2J4 779 aa4.13□□□□□ -1.75
SCARNA3-201ENST00000517097 PHF14O94880 888 aa4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 CSB-PGBD3P0DP91 1061 aa4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 SRPK2P78362 688 aaKnown RBP4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 CCDC27Q2M243 656 aa4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 TSR1Q2NL82 804 aaKnown RBP4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 TUSC1Q2TAM9 212 aa4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 PXYLP1Q8TE99 480 aa4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 SPIRE2Q8WWL2 714 aa4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 RBM33Q96EV2 1170 aaKnown RBP4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 BCL2L12Q9HB09 334 aa4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 HCSTQ9UBK5 93 aa4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 VPS9D1Q9Y2B5 631 aa4.12□□□□□ -1.75
SCARNA3-201ENST00000517097 CARNS1A5YM72 827 aa4.11□□□□□ -1.75
SCARNA3-201ENST00000517097 CFAP70Q5T0N1 1121 aa4.11□□□□□ -1.75
SCARNA3-201ENST00000517097 HDGFL1Q5TGJ6 251 aa4.11□□□□□ -1.75
SCARNA3-201ENST00000517097 ADAMTS19Q8TE59 1207 aa4.11□□□□□ -1.75
SCARNA3-201ENST00000517097 KCTD12Q96CX2 325 aaKnown RBP4.11□□□□□ -1.75
SCARNA3-201ENST00000517097 JPH4Q96JJ6 628 aa4.11□□□□□ -1.75
SCARNA3-201ENST00000517097 IVNS1ABPQ9Y6Y0 642 aa4.11□□□□□ -1.75
SCARNA3-201ENST00000517097 SPTLC1O15269 473 aa4.1□□□□□ -1.75
SCARNA3-201ENST00000517097 AP1G2O75843 785 aa4.1□□□□□ -1.75
SCARNA3-201ENST00000517097 PADI6Q6TGC4 694 aa4.1□□□□□ -1.75
SCARNA3-201ENST00000517097 SND1Q7KZF4 910 aaKnown RBP eCLIP4.1□□□□□ -1.75
SCARNA3-201ENST00000517097 KCNH8Q96L42 1107 aa4.1□□□□□ -1.75
SCARNA3-201ENST00000517097 ADAM33Q9BZ11 813 aa4.1□□□□□ -1.75
SCARNA3-201ENST00000517097 PLA2G2EQ9NZK7 142 aa4.1□□□□□ -1.75
SCARNA3-201ENST00000517097 PCDHGA10Q9Y5H3 936 aa4.1□□□□□ -1.75
SCARNA3-201ENST00000517097 ADGRG1Q9Y653 693 aa4.1□□□□□ -1.75
SCARNA3-201ENST00000517097 PTPREP23469 700 aa4.09□□□□□ -1.75
SCARNA3-201ENST00000517097 CSPP1Q1MSJ5 1256 aa4.09□□□□□ -1.75
SCARNA3-201ENST00000517097 ZDHHC16Q969W1 377 aa4.09□□□□□ -1.75
SCARNA3-201ENST00000517097 ZBED2Q9BTP6 218 aa4.09□□□□□ -1.75
SCARNA3-201ENST00000517097 SLC4A5Q9BY07 1137 aa4.09□□□□□ -1.75
SCARNA3-201ENST00000517097 VRTNQ9H8Y1 702 aa4.09□□□□□ -1.75
SCARNA3-201ENST00000517097 BHMG1C9JSJ3 638 aaPredicted RBP4.08□□□□□ -1.76
SCARNA3-201ENST00000517097 LILRB3O75022 631 aa4.08□□□□□ -1.76
SCARNA3-201ENST00000517097 USP17L8P0C7I0 530 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms