RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
LMNA-224ENST00000515711 MYOM2P54296 1465 aa16.81■□□□□ 0.28
LMNA-224ENST00000515711 CFAP65Q6ZU64 1925 aaKnown RBP16.81■□□□□ 0.28
LMNA-224ENST00000515711 NOS1P29475 1434 aa16.8■□□□□ 0.28
LMNA-224ENST00000515711 PPLO60437 1756 aa16.8■□□□□ 0.28
LMNA-224ENST00000515711 CLTCQ00610 1675 aaKnown RBP16.8■□□□□ 0.28
LMNA-224ENST00000515711 USP47Q96K76 1375 aa16.79■□□□□ 0.28
LMNA-224ENST00000515711 PIP4K2BP78356 416 aa16.79■□□□□ 0.28
LMNA-224ENST00000515711 SYNMO15061 1565 aa16.79■□□□□ 0.28
LMNA-224ENST00000515711 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
LMNA-224ENST00000515711 GPRASP1Q5JY77 1395 aa16.78■□□□□ 0.28
LMNA-224ENST00000515711 NCKAP5LQ9HCH0 1330 aa16.78■□□□□ 0.28
LMNA-224ENST00000515711 ZNF326Q5BKZ1 582 aaKnown RBP16.78■□□□□ 0.28
LMNA-224ENST00000515711 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
LMNA-224ENST00000515711 C3P01024 1663 aa16.77■□□□□ 0.28
LMNA-224ENST00000515711 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
LMNA-224ENST00000515711 IQGAP1P46940 1657 aa16.75■□□□□ 0.27
LMNA-224ENST00000515711 RGL3Q3MIN7 710 aa16.75■□□□□ 0.27
LMNA-224ENST00000515711 SETD1BQ9UPS6 1966 aaKnown RBP16.75■□□□□ 0.27
LMNA-224ENST00000515711 CARD11Q9BXL7 1154 aa16.73■□□□□ 0.27
LMNA-224ENST00000515711 HIRIP3Q9BW71 556 aaPredicted RBP16.72■□□□□ 0.27
LMNA-224ENST00000515711 NRXN1Q9ULB1 1477 aa16.72■□□□□ 0.27
LMNA-224ENST00000515711 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
LMNA-224ENST00000515711 ERVK-7P63135 1459 aa16.71■□□□□ 0.27
LMNA-224ENST00000515711 MIER1Q8N108 512 aa16.7■□□□□ 0.26
LMNA-224ENST00000515711 SETBP1Q9Y6X0 1596 aa16.69■□□□□ 0.26
LMNA-224ENST00000515711 MYO5BQ9ULV0 1848 aa16.69■□□□□ 0.26
LMNA-224ENST00000515711 DDX10Q13206 875 aaKnown RBP16.69■□□□□ 0.26
LMNA-224ENST00000515711 RPGRIP1LQ68CZ1 1315 aa16.69■□□□□ 0.26
LMNA-224ENST00000515711 TMEM131LA2VDJ0 1609 aa16.68■□□□□ 0.26
LMNA-224ENST00000515711 WASHC2AQ641Q2 1341 aa16.68■□□□□ 0.26
LMNA-224ENST00000515711 NEXMIFQ5QGS0 1516 aa16.67■□□□□ 0.26
LMNA-224ENST00000515711 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
LMNA-224ENST00000515711 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
LMNA-224ENST00000515711 SLC52A1Q9NWF4 448 aa16.67■□□□□ 0.26
LMNA-224ENST00000515711 KDM5AP29375 1690 aaKnown RBP16.66■□□□□ 0.26
LMNA-224ENST00000515711 SCAF11Q99590 1463 aaKnown RBP16.64■□□□□ 0.25
LMNA-224ENST00000515711 EIF3AQ14152 1382 aaKnown RBP16.64■□□□□ 0.25
LMNA-224ENST00000515711 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
LMNA-224ENST00000515711 TOM1O60784 492 aa16.63■□□□□ 0.25
LMNA-224ENST00000515711 KIF7Q2M1P5 1343 aa16.63■□□□□ 0.25
LMNA-224ENST00000515711 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
LMNA-224ENST00000515711 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
LMNA-224ENST00000515711 ANP32CO43423 234 aa16.61■□□□□ 0.25
LMNA-224ENST00000515711 RGS17Q9UGC6 210 aaPredicted RBP16.61■□□□□ 0.25
LMNA-224ENST00000515711 CHGAP10645 457 aaKnown RBP16.59■□□□□ 0.25
LMNA-224ENST00000515711 NBPF1Q3BBV0 1214 aa16.59■□□□□ 0.25
LMNA-224ENST00000515711 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.24
LMNA-224ENST00000515711 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
LMNA-224ENST00000515711 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
LMNA-224ENST00000515711 ZMYM3Q14202 1370 aa16.55■□□□□ 0.24
LMNA-224ENST00000515711 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
LMNA-224ENST00000515711 CCER2I3L3R5 266 aa16.55■□□□□ 0.24
LMNA-224ENST00000515711 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
LMNA-224ENST00000515711 SLC24A1O60721 1099 aa16.55■□□□□ 0.24
LMNA-224ENST00000515711 IDI1Q13907 227 aa16.55■□□□□ 0.24
LMNA-224ENST00000515711 ADGRB1O14514 1584 aa16.55■□□□□ 0.24
LMNA-224ENST00000515711 ARHGEF28Q8N1W1 1705 aaKnown RBP16.53■□□□□ 0.24
LMNA-224ENST00000515711 ZNF142P52746 1687 aaPredicted RBP16.53■□□□□ 0.24
LMNA-224ENST00000515711 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
LMNA-224ENST00000515711 CEP170BQ9Y4F5 1589 aaPredicted RBP16.52■□□□□ 0.24
LMNA-224ENST00000515711 CPS1P31327 1500 aa16.52■□□□□ 0.24
LMNA-224ENST00000515711 CENPBP07199 599 aaPredicted RBP16.52■□□□□ 0.24
LMNA-224ENST00000515711 UBR1Q8IWV7 1749 aa16.52■□□□□ 0.24
LMNA-224ENST00000515711 A2ML1A8K2U0 1454 aa16.52■□□□□ 0.23
LMNA-224ENST00000515711 NLRP1Q9C000 1473 aa16.51■□□□□ 0.23
LMNA-224ENST00000515711 TMF1P82094 1093 aa16.51■□□□□ 0.23
LMNA-224ENST00000515711 TNRQ92752 1358 aa16.51■□□□□ 0.23
LMNA-224ENST00000515711 SBNO2Q9Y2G9 1366 aa16.51■□□□□ 0.23
LMNA-224ENST00000515711 FBXO31Q5XUX0 539 aaPredicted RBP16.5■□□□□ 0.23
LMNA-224ENST00000515711 TESK2Q96S53 571 aa16.5■□□□□ 0.23
LMNA-224ENST00000515711 C14orf93Q9H972 538 aaKnown RBP16.5■□□□□ 0.23
LMNA-224ENST00000515711 CDCA8Q53HL2 280 aa16.49■□□□□ 0.23
LMNA-224ENST00000515711 CFAP70Q5T0N1 1121 aa16.49■□□□□ 0.23
LMNA-224ENST00000515711 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
LMNA-224ENST00000515711 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
LMNA-224ENST00000515711 SETD1AO15047 1707 aaKnown RBP16.48■□□□□ 0.23
LMNA-224ENST00000515711 MYOM1P52179 1685 aa16.47■□□□□ 0.23
LMNA-224ENST00000515711 RIMS2Q9UQ26 1411 aa16.45■□□□□ 0.22
LMNA-224ENST00000515711 KTN1Q86UP2 1357 aaKnown RBP16.45■□□□□ 0.22
LMNA-224ENST00000515711 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
LMNA-224ENST00000515711 POLR3GLQ9BT43 218 aa16.44■□□□□ 0.22
LMNA-224ENST00000515711 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.43■□□□□ 0.22
LMNA-224ENST00000515711 KNDC1Q76NI1 1749 aa16.42■□□□□ 0.22
LMNA-224ENST00000515711 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
LMNA-224ENST00000515711 HDGFP51858 240 aaKnown RBP16.41■□□□□ 0.22
LMNA-224ENST00000515711 PRKRIP1Q9H875 184 aaPredicted RBP16.41■□□□□ 0.22
LMNA-224ENST00000515711 CENPJQ9HC77 1338 aaPredicted RBP16.41■□□□□ 0.22
LMNA-224ENST00000515711 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
LMNA-224ENST00000515711 YTHDC1Q96MU7 727 aaKnown RBP16.38■□□□□ 0.21
LMNA-224ENST00000515711 SLIT1O75093 1534 aa16.37■□□□□ 0.21
LMNA-224ENST00000515711 TMEM2Q9UHN6 1383 aa16.37■□□□□ 0.21
LMNA-224ENST00000515711 YTHDC2Q9H6S0 1430 aaKnown RBP16.36■□□□□ 0.21
LMNA-224ENST00000515711 NUTM2DQ5VT03 806 aaPredicted RBP16.34■□□□□ 0.21
LMNA-224ENST00000515711 PUS7Q96PZ0 661 aaKnown RBP16.34■□□□□ 0.21
LMNA-224ENST00000515711 ARHGAP23Q9P227 1491 aa16.34■□□□□ 0.21
LMNA-224ENST00000515711 DIP2AQ14689 1571 aa16.34■□□□□ 0.21
LMNA-224ENST00000515711 RALBP1Q15311 655 aa16.33■□□□□ 0.2
LMNA-224ENST00000515711 TRAK1Q9UPV9 953 aa16.33■□□□□ 0.2
LMNA-224ENST00000515711 LRRC7Q96NW7 1537 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms