RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CAMSAP2Q08AD1 1489 aa16.25■□□□□ 0.19
SMAD1-215ENST00000515385 SCAPERQ9BY12 1400 aa16.25■□□□□ 0.19
SMAD1-215ENST00000515385 TRPM1Q7Z4N2 1603 aa16.24■□□□□ 0.19
SMAD1-215ENST00000515385 ERBB4Q15303 1308 aa16.24■□□□□ 0.19
SMAD1-215ENST00000515385 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
SMAD1-215ENST00000515385 SKOR2Q2VWA4 1001 aaPredicted RBP16.24■□□□□ 0.19
SMAD1-215ENST00000515385 PANK3Q9H999 370 aa16.24■□□□□ 0.19
SMAD1-215ENST00000515385 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
SMAD1-215ENST00000515385 E9PSI1 815 aa16.23■□□□□ 0.19
SMAD1-215ENST00000515385 CROCC2H7BZ55 1655 aa16.23■□□□□ 0.19
SMAD1-215ENST00000515385 PRAG1Q86YV5 1406 aa16.23■□□□□ 0.19
SMAD1-215ENST00000515385 BCL11BQ9C0K0 894 aaPredicted RBP16.23■□□□□ 0.19
SMAD1-215ENST00000515385 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.22■□□□□ 0.19
SMAD1-215ENST00000515385 ITSN2Q9NZM3 1697 aa16.22■□□□□ 0.19
SMAD1-215ENST00000515385 OFD1O75665 1012 aa16.22■□□□□ 0.19
SMAD1-215ENST00000515385 CCDC173Q0VFZ6 552 aa16.22■□□□□ 0.19
SMAD1-215ENST00000515385 KIAA1211Q6ZU35 1233 aa16.22■□□□□ 0.19
SMAD1-215ENST00000515385 IQGAP2Q13576 1575 aa16.21■□□□□ 0.19
SMAD1-215ENST00000515385 NUP155O75694 1391 aa16.21■□□□□ 0.19
SMAD1-215ENST00000515385 MTERF4Q7Z6M4 381 aaKnown RBP16.21■□□□□ 0.19
SMAD1-215ENST00000515385 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.18
SMAD1-215ENST00000515385 TMF1P82094 1093 aa16.2■□□□□ 0.18
SMAD1-215ENST00000515385 ERBINQ96RT1 1412 aa16.2■□□□□ 0.18
SMAD1-215ENST00000515385 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
SMAD1-215ENST00000515385 ABCC2Q92887 1545 aa16.19■□□□□ 0.18
SMAD1-215ENST00000515385 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
SMAD1-215ENST00000515385 PIK3C2GO75747 1445 aa16.19■□□□□ 0.18
SMAD1-215ENST00000515385 PPP2R1AP30153 589 aa16.19■□□□□ 0.18
SMAD1-215ENST00000515385 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
SMAD1-215ENST00000515385 PPP1R9BQ96SB3 815 aa16.19■□□□□ 0.18
SMAD1-215ENST00000515385 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
SMAD1-215ENST00000515385 TESK2Q96S53 571 aa16.18■□□□□ 0.18
SMAD1-215ENST00000515385 PTPRGP23470 1445 aa16.18■□□□□ 0.18
SMAD1-215ENST00000515385 CFDP1Q9UEE9 299 aaPredicted RBP16.18■□□□□ 0.18
SMAD1-215ENST00000515385 DISP3Q9P2K9 1392 aa16.18■□□□□ 0.18
SMAD1-215ENST00000515385 BCAR3O75815 825 aa16.17■□□□□ 0.18
SMAD1-215ENST00000515385 ANP32BQ92688 251 aaKnown RBP16.17■□□□□ 0.18
SMAD1-215ENST00000515385 GBP4Q96PP9 640 aa16.17■□□□□ 0.18
SMAD1-215ENST00000515385 SHANK2Q9UPX8 1470 aa16.17■□□□□ 0.18
SMAD1-215ENST00000515385 HSCBQ8IWL3 235 aa16.17■□□□□ 0.18
SMAD1-215ENST00000515385 SMAP1Q8IYB5 467 aaPredicted RBP16.16■□□□□ 0.18
SMAD1-215ENST00000515385 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
SMAD1-215ENST00000515385 HS1BP3Q53T59 392 aa16.15■□□□□ 0.18
SMAD1-215ENST00000515385 C22orf23Q9BZE7 217 aa16.15■□□□□ 0.18
SMAD1-215ENST00000515385 NCOA3Q9Y6Q9 1424 aa16.15■□□□□ 0.18
SMAD1-215ENST00000515385 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
SMAD1-215ENST00000515385 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
SMAD1-215ENST00000515385 RWDD1Q9H446 243 aaPredicted RBP16.14■□□□□ 0.17
SMAD1-215ENST00000515385 KNSTRNQ9Y448 316 aa16.14■□□□□ 0.17
SMAD1-215ENST00000515385 EIF2AK4Q9P2K8 1649 aaKnown RBP16.14■□□□□ 0.17
SMAD1-215ENST00000515385 NUP160Q12769 1436 aa16.14■□□□□ 0.17
SMAD1-215ENST00000515385 TROQ12816 1431 aaPredicted RBP16.14■□□□□ 0.17
SMAD1-215ENST00000515385 MSNP26038 577 aaKnown RBP16.14■□□□□ 0.17
SMAD1-215ENST00000515385 DDIT3P35638 169 aa16.14■□□□□ 0.17
SMAD1-215ENST00000515385 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
SMAD1-215ENST00000515385 GPATCH8Q9UKJ3 1502 aaKnown RBP16.13■□□□□ 0.17
SMAD1-215ENST00000515385 ABCC10Q5T3U5 1492 aa16.13■□□□□ 0.17
SMAD1-215ENST00000515385 IBTKQ9P2D0 1353 aaPredicted RBP16.12■□□□□ 0.17
SMAD1-215ENST00000515385 PDZRN3Q9UPQ7 1066 aa16.12■□□□□ 0.17
SMAD1-215ENST00000515385 RTEL1-TNFRSF6BF6WH68 1400 aa16.12■□□□□ 0.17
SMAD1-215ENST00000515385 SNX21Q969T3 373 aa16.12■□□□□ 0.17
SMAD1-215ENST00000515385 SPRYD3Q8NCJ5 442 aa16.11■□□□□ 0.17
SMAD1-215ENST00000515385 COG6Q9Y2V7 657 aa16.11■□□□□ 0.17
SMAD1-215ENST00000515385 NUP153P49790 1475 aaKnown RBP16.11■□□□□ 0.17
SMAD1-215ENST00000515385 RIPK4P57078 832 aa16.1■□□□□ 0.17
SMAD1-215ENST00000515385 GAS2L3Q86XJ1 694 aa16.1■□□□□ 0.17
SMAD1-215ENST00000515385 SMC5Q8IY18 1101 aa16.1■□□□□ 0.17
SMAD1-215ENST00000515385 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
SMAD1-215ENST00000515385 NASPP49321 788 aaPredicted RBP16.09■□□□□ 0.17
SMAD1-215ENST00000515385 NBPF1Q3BBV0 1214 aa16.09■□□□□ 0.17
SMAD1-215ENST00000515385 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
SMAD1-215ENST00000515385 AMER1Q5JTC6 1135 aaPredicted RBP16.09■□□□□ 0.17
SMAD1-215ENST00000515385 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
SMAD1-215ENST00000515385 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
SMAD1-215ENST00000515385 RAPGEF6Q8TEU7 1601 aa16.08■□□□□ 0.16
SMAD1-215ENST00000515385 WDR7Q9Y4E6 1490 aa16.08■□□□□ 0.16
SMAD1-215ENST00000515385 URB2Q14146 1524 aaKnown RBP16.07■□□□□ 0.16
SMAD1-215ENST00000515385 ASXL1Q8IXJ9 1541 aa16.07■□□□□ 0.16
SMAD1-215ENST00000515385 APAF1O14727 1248 aa16.07■□□□□ 0.16
SMAD1-215ENST00000515385 RAB3GAP1Q15042 981 aa16.07■□□□□ 0.16
SMAD1-215ENST00000515385 TNPO1Q92973 898 aaKnown RBP16.07■□□□□ 0.16
SMAD1-215ENST00000515385 C9orf84Q5VXU9 1444 aa16.07■□□□□ 0.16
SMAD1-215ENST00000515385 ZNF500O60304 480 aaPredicted RBP16.07■□□□□ 0.16
SMAD1-215ENST00000515385 CSPP1Q1MSJ5 1256 aa16.07■□□□□ 0.16
SMAD1-215ENST00000515385 CCDC141Q6ZP82 1450 aa16.07■□□□□ 0.16
SMAD1-215ENST00000515385 MAGI2Q86UL8 1455 aa16.07■□□□□ 0.16
SMAD1-215ENST00000515385 DYNC1I1O14576 645 aa16.06■□□□□ 0.16
SMAD1-215ENST00000515385 SYNMO15061 1565 aa16.06■□□□□ 0.16
SMAD1-215ENST00000515385 ARID3CA6NKF2 412 aa16.06■□□□□ 0.16
SMAD1-215ENST00000515385 GOLGA6L22H0YM25 854 aa16.06■□□□□ 0.16
SMAD1-215ENST00000515385 NCLP19338 710 aaKnown RBP16.05■□□□□ 0.16
SMAD1-215ENST00000515385 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
SMAD1-215ENST00000515385 PCDHB15Q9Y5E8 787 aa16.05■□□□□ 0.16
SMAD1-215ENST00000515385 MCM5P33992 734 aa16.04■□□□□ 0.16
SMAD1-215ENST00000515385 RBM25P49756 843 aaKnown RBP16.04■□□□□ 0.16
SMAD1-215ENST00000515385 A2MP01023 1474 aa16.04■□□□□ 0.16
SMAD1-215ENST00000515385 MFAP1P55081 439 aaKnown RBP16.04■□□□□ 0.16
SMAD1-215ENST00000515385 CLEC17AQ6ZS10 378 aa16.04■□□□□ 0.16
SMAD1-215ENST00000515385 FAM13BQ9NYF5 915 aa16.03■□□□□ 0.16
SMAD1-215ENST00000515385 NOL7Q9UMY1 257 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms