RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 ADGRB3O60242 1522 aa14.33□□□□□ -0.12
SNF8-214ENST00000515174 DCAF11Q8TEB1 546 aa14.33□□□□□ -0.12
SNF8-214ENST00000515174 MYO3AQ8NEV4 1616 aa14.33□□□□□ -0.12
SNF8-214ENST00000515174 NOS1P29475 1434 aa14.32□□□□□ -0.12
SNF8-214ENST00000515174 DDX10Q13206 875 aaKnown RBP14.32□□□□□ -0.12
SNF8-214ENST00000515174 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
SNF8-214ENST00000515174 WASHC2CQ9Y4E1 1318 aa14.32□□□□□ -0.12
SNF8-214ENST00000515174 ZMYM3Q14202 1370 aa14.32□□□□□ -0.12
SNF8-214ENST00000515174 GPRASP1Q5JY77 1395 aa14.32□□□□□ -0.12
SNF8-214ENST00000515174 PPLO60437 1756 aa14.32□□□□□ -0.12
SNF8-214ENST00000515174 PRAG1Q86YV5 1406 aa14.32□□□□□ -0.12
SNF8-214ENST00000515174 TMEM131LA2VDJ0 1609 aa14.28□□□□□ -0.12
SNF8-214ENST00000515174 ZNF142P52746 1687 aaPredicted RBP14.28□□□□□ -0.12
SNF8-214ENST00000515174 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
SNF8-214ENST00000515174 WASHC2AQ641Q2 1341 aa14.28□□□□□ -0.12
SNF8-214ENST00000515174 UBR1Q8IWV7 1749 aa14.28□□□□□ -0.12
SNF8-214ENST00000515174 HIRIP3Q9BW71 556 aaPredicted RBP14.28□□□□□ -0.12
SNF8-214ENST00000515174 CCDC7Q96M83 1385 aa14.27□□□□□ -0.12
SNF8-214ENST00000515174 USP47Q96K76 1375 aa14.26□□□□□ -0.13
SNF8-214ENST00000515174 KDM5AP29375 1690 aaKnown RBP14.26□□□□□ -0.13
SNF8-214ENST00000515174 LAMC1P11047 1609 aa14.26□□□□□ -0.13
SNF8-214ENST00000515174 CCER2I3L3R5 266 aa14.25□□□□□ -0.13
SNF8-214ENST00000515174 RGL3Q3MIN7 710 aa14.25□□□□□ -0.13
SNF8-214ENST00000515174 CARD11Q9BXL7 1154 aa14.25□□□□□ -0.13
SNF8-214ENST00000515174 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
SNF8-214ENST00000515174 TRPM1Q7Z4N2 1603 aa14.23□□□□□ -0.13
SNF8-214ENST00000515174 TOM1O60784 492 aa14.23□□□□□ -0.13
SNF8-214ENST00000515174 HSPA1LP34931 641 aa14.23□□□□□ -0.13
SNF8-214ENST00000515174 PHF23Q9BUL5 403 aaPredicted RBP14.23□□□□□ -0.13
SNF8-214ENST00000515174 ROCK2O75116 1388 aaKnown RBP14.22□□□□□ -0.13
SNF8-214ENST00000515174 RPGRIP1LQ68CZ1 1315 aa14.22□□□□□ -0.13
SNF8-214ENST00000515174 NEXMIFQ5QGS0 1516 aa14.22□□□□□ -0.13
SNF8-214ENST00000515174 POLR1AO95602 1720 aaPredicted RBP14.22□□□□□ -0.13
SNF8-214ENST00000515174 C11orf95C9JLR9 678 aaPredicted RBP14.22□□□□□ -0.13
SNF8-214ENST00000515174 ANP32CO43423 234 aa14.22□□□□□ -0.13
SNF8-214ENST00000515174 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
SNF8-214ENST00000515174 ZNF326Q5BKZ1 582 aaKnown RBP14.21□□□□□ -0.13
SNF8-214ENST00000515174 CEP170BQ9Y4F5 1589 aaPredicted RBP14.21□□□□□ -0.14
SNF8-214ENST00000515174 KIF7Q2M1P5 1343 aa14.2□□□□□ -0.14
SNF8-214ENST00000515174 TNRQ92752 1358 aa14.2□□□□□ -0.14
SNF8-214ENST00000515174 MYOM2P54296 1465 aa14.19□□□□□ -0.14
SNF8-214ENST00000515174 FBXO31Q5XUX0 539 aaPredicted RBP14.19□□□□□ -0.14
SNF8-214ENST00000515174 SLC52A1Q9NWF4 448 aa14.19□□□□□ -0.14
SNF8-214ENST00000515174 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
SNF8-214ENST00000515174 KIAA1210Q9ULL0 1709 aa14.18□□□□□ -0.14
SNF8-214ENST00000515174 IQGAP1P46940 1657 aa14.17□□□□□ -0.14
SNF8-214ENST00000515174 NBPF1Q3BBV0 1214 aa14.17□□□□□ -0.14
SNF8-214ENST00000515174 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
SNF8-214ENST00000515174 NRXN1Q9ULB1 1477 aa14.17□□□□□ -0.14
SNF8-214ENST00000515174 MED1Q15648 1581 aaPredicted RBP14.17□□□□□ -0.14
SNF8-214ENST00000515174 SETD1AO15047 1707 aaKnown RBP14.16□□□□□ -0.14
SNF8-214ENST00000515174 ST20-MTHFSA0A0A6YYL1 179 aa14.16□□□□□ -0.14
SNF8-214ENST00000515174 NLRP1Q9C000 1473 aa14.16□□□□□ -0.14
SNF8-214ENST00000515174 A2ML1A8K2U0 1454 aa14.15□□□□□ -0.14
SNF8-214ENST00000515174 NRXN3Q9Y4C0 1643 aa14.13□□□□□ -0.15
SNF8-214ENST00000515174 ANKLE2Q86XL3 938 aa14.13□□□□□ -0.15
SNF8-214ENST00000515174 CPS1P31327 1500 aa14.13□□□□□ -0.15
SNF8-214ENST00000515174 ZFYVE9O95405 1425 aa14.13□□□□□ -0.15
SNF8-214ENST00000515174 TESK2Q96S53 571 aa14.12□□□□□ -0.15
SNF8-214ENST00000515174 SCAF11Q99590 1463 aaKnown RBP14.11□□□□□ -0.15
SNF8-214ENST00000515174 CHGAP10645 457 aaKnown RBP14.1□□□□□ -0.15
SNF8-214ENST00000515174 IDI1Q13907 227 aa14.1□□□□□ -0.15
SNF8-214ENST00000515174 THEMISQ8N1K5 641 aaPredicted RBP14.1□□□□□ -0.15
SNF8-214ENST00000515174 VGFO15240 615 aaPredicted RBP14.09□□□□□ -0.15
SNF8-214ENST00000515174 ASXL1Q8IXJ9 1541 aa14.09□□□□□ -0.15
SNF8-214ENST00000515174 PRKRIP1Q9H875 184 aaPredicted RBP14.08□□□□□ -0.16
SNF8-214ENST00000515174 C14orf93Q9H972 538 aaKnown RBP14.08□□□□□ -0.16
SNF8-214ENST00000515174 SLIT1O75093 1534 aa14.08□□□□□ -0.16
SNF8-214ENST00000515174 ADGRF5Q8IZF2 1346 aa14.08□□□□□ -0.16
SNF8-214ENST00000515174 SETBP1Q9Y6X0 1596 aa14.08□□□□□ -0.16
SNF8-214ENST00000515174 PIK3C2GO75747 1445 aa14.07□□□□□ -0.16
SNF8-214ENST00000515174 TMF1P82094 1093 aa14.07□□□□□ -0.16
SNF8-214ENST00000515174 CDCA8Q53HL2 280 aa14.07□□□□□ -0.16
SNF8-214ENST00000515174 EIF3AQ14152 1382 aaKnown RBP14.07□□□□□ -0.16
SNF8-214ENST00000515174 KTN1Q86UP2 1357 aaKnown RBP14.07□□□□□ -0.16
SNF8-214ENST00000515174 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
SNF8-214ENST00000515174 RIMS2Q9UQ26 1411 aa14.07□□□□□ -0.16
SNF8-214ENST00000515174 ARHGAP23Q9P227 1491 aa14.06□□□□□ -0.16
SNF8-214ENST00000515174 SBNO2Q9Y2G9 1366 aa14.05□□□□□ -0.16
SNF8-214ENST00000515174 NPHP4O75161 1426 aaPredicted RBP14.05□□□□□ -0.16
SNF8-214ENST00000515174 CFAP70Q5T0N1 1121 aa14.04□□□□□ -0.16
SNF8-214ENST00000515174 KNDC1Q76NI1 1749 aa14.04□□□□□ -0.16
SNF8-214ENST00000515174 ADGRB1O14514 1584 aa14.03□□□□□ -0.16
SNF8-214ENST00000515174 ALKQ9UM73 1620 aa14.02□□□□□ -0.16
SNF8-214ENST00000515174 QRICH2Q9H0J4 1663 aa14.01□□□□□ -0.17
SNF8-214ENST00000515174 TMEM2Q9UHN6 1383 aa14.01□□□□□ -0.17
SNF8-214ENST00000515174 PER1O15534 1290 aaPredicted RBP14.01□□□□□ -0.17
SNF8-214ENST00000515174 YTHDC1Q96MU7 727 aaKnown RBP14.01□□□□□ -0.17
SNF8-214ENST00000515174 PUS7Q96PZ0 661 aaKnown RBP14.01□□□□□ -0.17
SNF8-214ENST00000515174 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
SNF8-214ENST00000515174 NUTM2DQ5VT03 806 aaPredicted RBP14□□□□□ -0.17
SNF8-214ENST00000515174 RALBP1Q15311 655 aa13.99□□□□□ -0.17
SNF8-214ENST00000515174 DIP2AQ14689 1571 aa13.99□□□□□ -0.17
SNF8-214ENST00000515174 MED14O60244 1454 aa13.97□□□□□ -0.17
SNF8-214ENST00000515174 LRRC7Q96NW7 1537 aa13.96□□□□□ -0.17
SNF8-214ENST00000515174 XRN1Q8IZH2 1706 aaKnown RBP13.95□□□□□ -0.18
SNF8-214ENST00000515174 HDGFP51858 240 aaKnown RBP13.94□□□□□ -0.18
SNF8-214ENST00000515174 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNF8-214ENST00000515174 POLR3GLQ9BT43 218 aa13.94□□□□□ -0.18
SNF8-214ENST00000515174 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms