RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 FER1L4A9Z1Z3 1794 aa9.67□□□□□ -0.86
GYPB-215ENST00000513677 SIGLEC1Q9BZZ2 1709 aa9.67□□□□□ -0.86
GYPB-215ENST00000513677 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
GYPB-215ENST00000513677 VSIG10Q8N0Z9 540 aa9.66□□□□□ -0.86
GYPB-215ENST00000513677 ZNF710Q8N1W2 664 aa9.66□□□□□ -0.86
GYPB-215ENST00000513677 FAM163AQ96GL9 167 aaPredicted RBP9.66□□□□□ -0.86
GYPB-215ENST00000513677 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
GYPB-215ENST00000513677 EFCAB5A4FU69 1503 aa9.66□□□□□ -0.86
GYPB-215ENST00000513677 RIMBP2O15034 1052 aa9.65□□□□□ -0.86
GYPB-215ENST00000513677 HECW1Q76N89 1606 aa9.64□□□□□ -0.87
GYPB-215ENST00000513677 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.87
GYPB-215ENST00000513677 SLC34A2O95436 690 aa9.63□□□□□ -0.87
GYPB-215ENST00000513677 CERKQ8TCT0 537 aa9.63□□□□□ -0.87
GYPB-215ENST00000513677 SCAPERQ9BY12 1400 aa9.63□□□□□ -0.87
GYPB-215ENST00000513677 ZMYM4Q5VZL5 1548 aa9.62□□□□□ -0.87
GYPB-215ENST00000513677 ST18O60284 1047 aa9.62□□□□□ -0.87
GYPB-215ENST00000513677 SLC24A1O60721 1099 aa9.62□□□□□ -0.87
GYPB-215ENST00000513677 CEBPAP49715 358 aaPredicted RBP9.62□□□□□ -0.87
GYPB-215ENST00000513677 CAMK2BQ13554 666 aa9.62□□□□□ -0.87
GYPB-215ENST00000513677 E2F4Q16254 413 aa9.62□□□□□ -0.87
GYPB-215ENST00000513677 EMILIN3Q9NT22 766 aa9.62□□□□□ -0.87
GYPB-215ENST00000513677 MYO5CQ9NQX4 1742 aa9.6□□□□□ -0.87
GYPB-215ENST00000513677 EEA1Q15075 1411 aa9.6□□□□□ -0.87
GYPB-215ENST00000513677 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
GYPB-215ENST00000513677 OXER1Q8TDS5 423 aa9.6□□□□□ -0.87
GYPB-215ENST00000513677 PTCD2Q8WV60 388 aaKnown RBP9.6□□□□□ -0.87
GYPB-215ENST00000513677 ZSWIM6Q9HCJ5 1215 aa9.6□□□□□ -0.87
GYPB-215ENST00000513677 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
GYPB-215ENST00000513677 PREX1Q8TCU6 1659 aa9.59□□□□□ -0.87
GYPB-215ENST00000513677 UBTFP17480 764 aaKnown RBP9.59□□□□□ -0.87
GYPB-215ENST00000513677 LCE2DQ5TA82 110 aaPredicted RBP9.59□□□□□ -0.87
GYPB-215ENST00000513677 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.873e-6■■■□□ 17.7
GYPB-215ENST00000513677 MAGI2Q86UL8 1455 aa9.59□□□□□ -0.87
GYPB-215ENST00000513677 PLCH2O75038 1416 aa9.58□□□□□ -0.88
GYPB-215ENST00000513677 EFCAB2Q5VUJ9 269 aa9.58□□□□□ -0.88
GYPB-215ENST00000513677 GPR153Q6NV75 609 aa9.58□□□□□ -0.88
GYPB-215ENST00000513677 DISP3Q9P2K9 1392 aa9.58□□□□□ -0.88
GYPB-215ENST00000513677 ATP10AO60312 1499 aa9.58□□□□□ -0.88
GYPB-215ENST00000513677 C9orf84Q5VXU9 1444 aa9.57□□□□□ -0.88
GYPB-215ENST00000513677 ARHGAP5Q13017 1502 aa9.57□□□□□ -0.88
GYPB-215ENST00000513677 KIF14Q15058 1648 aa9.57□□□□□ -0.88
GYPB-215ENST00000513677 TBC1D12O60347 775 aa9.57□□□□□ -0.88
GYPB-215ENST00000513677 KCNV2Q8TDN2 545 aa9.57□□□□□ -0.88
GYPB-215ENST00000513677 ARHGEF12Q9NZN5 1544 aa9.56□□□□□ -0.88
GYPB-215ENST00000513677 DPYSL4O14531 572 aa9.56□□□□□ -0.88
GYPB-215ENST00000513677 HOXB1P14653 301 aaPredicted RBP9.56□□□□□ -0.88
GYPB-215ENST00000513677 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
GYPB-215ENST00000513677 AFAP1Q8N556 730 aa9.56□□□□□ -0.88
GYPB-215ENST00000513677 NUDT7P0C024 238 aa9.55□□□□□ -0.88
GYPB-215ENST00000513677 CDK11AQ9UQ88 783 aaPredicted RBP9.55□□□□□ -0.88
GYPB-215ENST00000513677 UHRF1BP1Q6BDS2 1440 aa9.55□□□□□ -0.88
GYPB-215ENST00000513677 MARVELD3Q96A59 401 aa9.54□□□□□ -0.88
GYPB-215ENST00000513677 ESF1Q9H501 851 aaKnown RBP9.54□□□□□ -0.88
GYPB-215ENST00000513677 STRCQ7RTU9 1775 aa9.54□□□□□ -0.88
GYPB-215ENST00000513677 ZNF518AQ6AHZ1 1483 aa9.53□□□□□ -0.88
GYPB-215ENST00000513677 ILDR2Q71H61 639 aa9.53□□□□□ -0.88
GYPB-215ENST00000513677 CLIP1P30622 1438 aa9.53□□□□□ -0.88
GYPB-215ENST00000513677 FMN1Q68DA7 1419 aa9.53□□□□□ -0.88
GYPB-215ENST00000513677 EMP3P54852 163 aa9.52□□□□□ -0.89
GYPB-215ENST00000513677 LRRIQ1Q96JM4 1722 aa9.52□□□□□ -0.89
GYPB-215ENST00000513677 DIP2CQ9Y2E4 1556 aa9.52□□□□□ -0.89
GYPB-215ENST00000513677 ABCA6Q8N139 1617 aa9.52□□□□□ -0.89
GYPB-215ENST00000513677 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
GYPB-215ENST00000513677 C3P01024 1663 aa9.51□□□□□ -0.89
GYPB-215ENST00000513677 TROQ12816 1431 aaPredicted RBP9.51□□□□□ -0.89
GYPB-215ENST00000513677 EVI5O60447 810 aa9.51□□□□□ -0.89
GYPB-215ENST00000513677 CDC42BPBQ9Y5S2 1711 aa9.51□□□□□ -0.89
GYPB-215ENST00000513677 ARHGEF1Q92888 912 aaKnown RBP9.5□□□□□ -0.89
GYPB-215ENST00000513677 ARIH1Q9Y4X5 557 aaPredicted RBP9.5□□□□□ -0.89
GYPB-215ENST00000513677 KDM5CP41229 1560 aa9.5□□□□□ -0.89
GYPB-215ENST00000513677 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
GYPB-215ENST00000513677 SPATA31D1Q6ZQQ2 1576 aa9.49□□□□□ -0.89
GYPB-215ENST00000513677 TRAPPC8Q9Y2L5 1435 aa9.48□□□□□ -0.89
GYPB-215ENST00000513677 ZNF316A6NFI3 1004 aaPredicted RBP9.48□□□□□ -0.89
GYPB-215ENST00000513677 PREX2Q70Z35 1606 aa9.48□□□□□ -0.89
GYPB-215ENST00000513677 ITSN2Q9NZM3 1697 aa9.48□□□□□ -0.89
GYPB-215ENST00000513677 SETD1BQ9UPS6 1966 aaKnown RBP9.47□□□□□ -0.89
GYPB-215ENST00000513677 PDIA6Q15084 440 aa9.47□□□□□ -0.89
GYPB-215ENST00000513677 LHX6Q9UPM6 363 aa9.47□□□□□ -0.89
GYPB-215ENST00000513677 ABCC1P33527 1531 aa9.46□□□□□ -0.89
GYPB-215ENST00000513677 FAM205CA6NFA0 338 aa9.46□□□□□ -0.9
GYPB-215ENST00000513677 SOCS7O14512 581 aa9.46□□□□□ -0.9
GYPB-215ENST00000513677 ERBB3P21860 1342 aa9.46□□□□□ -0.9
GYPB-215ENST00000513677 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
GYPB-215ENST00000513677 SPDYE16A6NNV3 312 aaPredicted RBP9.45□□□□□ -0.9
GYPB-215ENST00000513677 PTPRTO14522 1441 aa9.45□□□□□ -0.9
GYPB-215ENST00000513677 MLH3Q9UHC1 1453 aa9.45□□□□□ -0.9
GYPB-215ENST00000513677 REREQ9P2R6 1566 aa9.45□□□□□ -0.9
GYPB-215ENST00000513677 CDC42BPAQ5VT25 1732 aa9.45□□□□□ -0.9
GYPB-215ENST00000513677 KIDINS220Q9ULH0 1771 aa9.45□□□□□ -0.9
GYPB-215ENST00000513677 POTEGQ6S5H5 508 aa9.44□□□□□ -0.9
GYPB-215ENST00000513677 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
GYPB-215ENST00000513677 CAMSAP1Q5T5Y3 1602 aa9.44□□□□□ -0.9
GYPB-215ENST00000513677 AGLP35573 1532 aa9.43□□□□□ -0.9
GYPB-215ENST00000513677 POTEMA6NI47 508 aa9.43□□□□□ -0.9
GYPB-215ENST00000513677 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
GYPB-215ENST00000513677 HS3ST6Q96QI5 342 aa9.43□□□□□ -0.9
GYPB-215ENST00000513677 CLTCQ00610 1675 aaKnown RBP9.42□□□□□ -0.9
GYPB-215ENST00000513677 LTBP4Q8N2S1 1624 aa9.42□□□□□ -0.9
GYPB-215ENST00000513677 SYCP2Q9BX26 1530 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms