RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
SNX25-205ENST00000512853 NPC1L1Q9UHC9 1359 aa15.22■□□□□ 0.03
SNX25-205ENST00000512853 PPM1GO15355 546 aaPredicted RBP15.21■□□□□ 0.03
SNX25-205ENST00000512853 NEURL4Q96JN8 1562 aa15.21■□□□□ 0.03
SNX25-205ENST00000512853 CLTCL1P53675 1640 aa15.21■□□□□ 0.03
SNX25-205ENST00000512853 PPP2R1AP30153 589 aa15.21■□□□□ 0.02
SNX25-205ENST00000512853 PLCH2O75038 1416 aa15.21■□□□□ 0.02
SNX25-205ENST00000512853 PTPRTO14522 1441 aa15.2■□□□□ 0.02
SNX25-205ENST00000512853 ADAMTS8Q9UP79 889 aa15.2■□□□□ 0.02
SNX25-205ENST00000512853 TET3O43151 1660 aa15.2■□□□□ 0.02
SNX25-205ENST00000512853 KDM5AP29375 1690 aaKnown RBP15.2■□□□□ 0.02
SNX25-205ENST00000512853 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
SNX25-205ENST00000512853 DUSP27Q5VZP5 1158 aa15.19■□□□□ 0.02
SNX25-205ENST00000512853 CENPQQ7L2Z9 268 aaPredicted RBP15.19■□□□□ 0.02
SNX25-205ENST00000512853 C20orf194Q5TEA3 1177 aa15.18■□□□□ 0.02
SNX25-205ENST00000512853 STAC3Q96MF2 364 aa15.18■□□□□ 0.02
SNX25-205ENST00000512853 ZCCHC11Q5TAX3 1644 aaKnown RBP15.18■□□□□ 0.02
SNX25-205ENST00000512853 ZFYVE16Q7Z3T8 1539 aa15.17■□□□□ 0.02
SNX25-205ENST00000512853 NEFMP07197 916 aa15.17■□□□□ 0.02
SNX25-205ENST00000512853 WDR43Q15061 677 aaKnown RBP eCLIP15.17■□□□□ 0.02
SNX25-205ENST00000512853 CDCA8Q53HL2 280 aa15.17■□□□□ 0.02
SNX25-205ENST00000512853 KNSTRNQ9Y448 316 aa15.17■□□□□ 0.02
SNX25-205ENST00000512853 LAS1LQ9Y4W2 734 aaKnown RBP15.17■□□□□ 0.02
SNX25-205ENST00000512853 ARAP3Q8WWN8 1544 aa15.17■□□□□ 0.02
SNX25-205ENST00000512853 EIF3AQ14152 1382 aaKnown RBP15.16■□□□□ 0.02
SNX25-205ENST00000512853 VIRMAQ69YN4 1812 aaKnown RBP15.16■□□□□ 0.02
SNX25-205ENST00000512853 RTEL1-TNFRSF6BF6WH68 1400 aa15.16■□□□□ 0.02
SNX25-205ENST00000512853 ERCC6L2Q5T890 1561 aa15.16■□□□□ 0.02
SNX25-205ENST00000512853 VWDEQ8N2E2 1590 aa15.16■□□□□ 0.02
SNX25-205ENST00000512853 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
SNX25-205ENST00000512853 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
SNX25-205ENST00000512853 UHRF1BP1LA0JNW5 1464 aa15.14■□□□□ 0.01
SNX25-205ENST00000512853 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.14■□□□□ 0.01
SNX25-205ENST00000512853 SKAP1Q86WV1 359 aa15.13■□□□□ 0.01
SNX25-205ENST00000512853 TRMT2AQ8IZ69 625 aaKnown RBP15.13■□□□□ 0.01
SNX25-205ENST00000512853 SLFN5Q08AF3 891 aa15.13■□□□□ 0.01
SNX25-205ENST00000512853 MYO3AQ8NEV4 1616 aa15.12■□□□□ 0.01
SNX25-205ENST00000512853 INO80Q9ULG1 1556 aaPredicted RBP15.11■□□□□ 0.01
SNX25-205ENST00000512853 NKTRP30414 1462 aaKnown RBP15.11■□□□□ 0.01
SNX25-205ENST00000512853 MYOM2P54296 1465 aa15.11■□□□□ 0.01
SNX25-205ENST00000512853 EFCAB2Q5VUJ9 269 aa15.11■□□□□ 0.01
SNX25-205ENST00000512853 IFT172Q9UG01 1749 aa15.11■□□□□ 0.01
SNX25-205ENST00000512853 ABCA6Q8N139 1617 aa15.11■□□□□ 0.01
SNX25-205ENST00000512853 FAM161AQ3B820 660 aa15.11■□□□□ 0.01
SNX25-205ENST00000512853 MAP3K4Q9Y6R4 1608 aa15.11■□□□□ 0.01
SNX25-205ENST00000512853 C8orf34Q49A92 452 aa15.09■□□□□ 0.01
SNX25-205ENST00000512853 ERVK-7P63135 1459 aa15.09■□□□□ 0.01
SNX25-205ENST00000512853 NGEFQ8N5V2 710 aa15.07■□□□□ 0
SNX25-205ENST00000512853 MROH1Q8NDA8 1641 aa15.07■□□□□ 0
SNX25-205ENST00000512853 NINLQ9Y2I6 1382 aa15.07■□□□□ 0
SNX25-205ENST00000512853 ATP7AQ04656 1500 aa15.06■□□□□ 0
SNX25-205ENST00000512853 SPAG9O60271 1321 aaKnown RBP15.06■□□□□ 0
SNX25-205ENST00000512853 ABCA9Q8IUA7 1624 aa15.06■□□□□ 0
SNX25-205ENST00000512853 KIF1BO60333 1816 aa15.05■□□□□ 0
SNX25-205ENST00000512853 SLC24A1O60721 1099 aa15.05■□□□□ -0
SNX25-205ENST00000512853 NRXN1Q9ULB1 1477 aa15.04■□□□□ -0
SNX25-205ENST00000512853 SHPRHQ149N8 1683 aa15.04■□□□□ -0
SNX25-205ENST00000512853 E9PSI1 815 aa15.04■□□□□ -0
SNX25-205ENST00000512853 NFKBIBQ15653 356 aa15.04■□□□□ -0
SNX25-205ENST00000512853 SBNO2Q9Y2G9 1366 aa15.03■□□□□ -0
SNX25-205ENST00000512853 ZC3H13Q5T200 1668 aaKnown RBP15.03■□□□□ -0
SNX25-205ENST00000512853 MROH2AA6NES4 1674 aa15.03■□□□□ -0
SNX25-205ENST00000512853 KANK1Q14678 1352 aa15.03■□□□□ -0
SNX25-205ENST00000512853 EFCAB6Q5THR3 1501 aa15.02□□□□□ -0.01
SNX25-205ENST00000512853 POLR3AO14802 1390 aaPredicted RBP15.02□□□□□ -0.01
SNX25-205ENST00000512853 CCDC146Q8IYE0 955 aa15.02□□□□□ -0.01
SNX25-205ENST00000512853 IL27Q8NEV9 243 aa15.02□□□□□ -0.01
SNX25-205ENST00000512853 SPINK5Q9NQ38 1064 aaPredicted RBP15.02□□□□□ -0.01
SNX25-205ENST00000512853 SETBP1Q9Y6X0 1596 aa15.01□□□□□ -0.01
SNX25-205ENST00000512853 APAF1O14727 1248 aa15.01□□□□□ -0.01
SNX25-205ENST00000512853 USP32Q8NFA0 1604 aa15.01□□□□□ -0.01
SNX25-205ENST00000512853 CGNL1Q0VF96 1302 aa15□□□□□ -0.01
SNX25-205ENST00000512853 PDE3AQ14432 1141 aa15□□□□□ -0.01
SNX25-205ENST00000512853 GSE1Q14687 1217 aa15□□□□□ -0.01
SNX25-205ENST00000512853 DAXXQ9UER7 740 aaPredicted RBP15□□□□□ -0.01
SNX25-205ENST00000512853 IQSEC2Q5JU85 1478 aa14.99□□□□□ -0.01
SNX25-205ENST00000512853 UGGT1Q9NYU2 1555 aa14.99□□□□□ -0.01
SNX25-205ENST00000512853 LMTK2Q8IWU2 1503 aa14.98□□□□□ -0.01
SNX25-205ENST00000512853 ADGRB3O60242 1522 aa14.98□□□□□ -0.01
SNX25-205ENST00000512853 PPRC1Q5VV67 1664 aaKnown RBP14.98□□□□□ -0.01
SNX25-205ENST00000512853 BCAR3O75815 825 aa14.97□□□□□ -0.01
SNX25-205ENST00000512853 SLC4A3P48751 1232 aa14.97□□□□□ -0.01
SNX25-205ENST00000512853 RGS3P49796 1198 aa14.97□□□□□ -0.01
SNX25-205ENST00000512853 CARD14Q9BXL6 1004 aa14.97□□□□□ -0.01
SNX25-205ENST00000512853 ZMYM3Q14202 1370 aa14.96□□□□□ -0.01
SNX25-205ENST00000512853 MAPK8IP3Q9UPT6 1336 aa14.96□□□□□ -0.01
SNX25-205ENST00000512853 AFAP1Q8N556 730 aa14.96□□□□□ -0.02
SNX25-205ENST00000512853 DMRT2Q9Y5R5 561 aa14.96□□□□□ -0.02
SNX25-205ENST00000512853 QRICH2Q9H0J4 1663 aa14.95□□□□□ -0.02
SNX25-205ENST00000512853 CENPJQ9HC77 1338 aaPredicted RBP14.95□□□□□ -0.02
SNX25-205ENST00000512853 CFAP70Q5T0N1 1121 aa14.95□□□□□ -0.02
SNX25-205ENST00000512853 FANCAO15360 1455 aa14.95□□□□□ -0.02
SNX25-205ENST00000512853 NLRP1Q9C000 1473 aa14.95□□□□□ -0.02
SNX25-205ENST00000512853 USP19O94966 1318 aa14.95□□□□□ -0.02
SNX25-205ENST00000512853 PPLO60437 1756 aa14.94□□□□□ -0.02
SNX25-205ENST00000512853 ADGRF5Q8IZF2 1346 aa14.94□□□□□ -0.02
SNX25-205ENST00000512853 IGHDP01880 384 aa14.94□□□□□ -0.02
SNX25-205ENST00000512853 AAMPQ13685 434 aa14.93□□□□□ -0.02
SNX25-205ENST00000512853 CLUAP1Q96AJ1 413 aa14.93□□□□□ -0.02
SNX25-205ENST00000512853 WWC1Q8IX03 1113 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms