RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 SF3B1O75533 1304 aaKnown RBP eCLIP11.95□□□□□ -0.55e-10■■■■■ 120.6
SNX25-205ENST00000512853 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.31□□□□□ -0.441e-9■■■■■ 76.9
SNX25-205ENST00000512853 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.364e-11■■■■■ 46.9
SNX25-205ENST00000512853 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.61□□□□□ -0.554e-6■■■■■ 41.2
SNX25-205ENST00000512853 ZNF622Q969S3 477 aaKnown RBP eCLIP12.21□□□□□ -0.462e-8■■■■■ 32.4
SNX25-205ENST00000512853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.4□□□□□ -1.068e-9■■■■■ 28.9
SNX25-205ENST00000512853 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.52e-7■■■■□ 26
SNX25-205ENST00000512853 QKIQ96PU8 341 aaKnown RBP eCLIP11.95□□□□□ -0.52e-6■■■□□ 18.7
SNX25-205ENST00000512853 HNRNPLP14866 589 aaKnown RBP eCLIP11.65□□□□□ -0.541e-7■■■□□ 17.6
SNX25-205ENST00000512853 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.96□□□□□ -0.663e-6■■■□□ 15.3
SNX25-205ENST00000512853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.251e-6■■■□□ 15.3
SNX25-205ENST00000512853 ILF3Q12906 894 aaKnown RBP eCLIP10.64□□□□□ -0.712e-6■■□□□ 13.8
SNX25-205ENST00000512853 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.247e-6■□□□□ 11.2
SNX25-205ENST00000512853 PPIGQ13427 754 aaKnown RBP eCLIP11.15□□□□□ -0.625e-7■□□□□ 9.2
Retrieved 14 of 14 RNA–protein pairs in 4.4 ms