RNA–Protein interactions for RNA: ENST00000512681.5

SPOCK3-222, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 2 BASIC

Gene SPOCK3, Length 1,457 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-222	ENST00000512681	ZNF326	Q5BKZ1	582 aa	Known RBP	31.74	■■■□□ 2.67
SPOCK3-222	ENST00000512681	ZFYVE9	O95405	1425 aa		31.73	■■■□□ 2.67
SPOCK3-222	ENST00000512681	RPGRIP1L	Q68CZ1	1315 aa		31.73	■■■□□ 2.67
SPOCK3-222	ENST00000512681	NEXMIF	Q5QGS0	1516 aa		31.72	■■■□□ 2.67
SPOCK3-222	ENST00000512681	RIMS2	Q9UQ26	1411 aa		31.71	■■■□□ 2.67
SPOCK3-222	ENST00000512681	HSPA2	P54652	639 aa		31.71	■■■□□ 2.67
SPOCK3-222	ENST00000512681	L3MBTL2	Q969R5	705 aa		31.7	■■■□□ 2.66
SPOCK3-222	ENST00000512681	PPL	O60437	1756 aa		31.67	■■■□□ 2.66
SPOCK3-222	ENST00000512681	IFT172	Q9UG01	1749 aa		31.67	■■■□□ 2.66
SPOCK3-222	ENST00000512681	HDGF	P51858	240 aa	Known RBP	31.65	■■■□□ 2.66
SPOCK3-222	ENST00000512681	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.65	■■■□□ 2.66
SPOCK3-222	ENST00000512681	LTK	P29376	864 aa		31.65	■■■□□ 2.66
SPOCK3-222	ENST00000512681	DIEXF	Q68CQ4	756 aa	Known RBP	31.65	■■■□□ 2.66
SPOCK3-222	ENST00000512681	SCAF11	Q99590	1463 aa	Known RBP	31.63	■■■□□ 2.65
SPOCK3-222	ENST00000512681	TXNDC2	Q86VQ3	553 aa		31.63	■■■□□ 2.65
SPOCK3-222	ENST00000512681	ANKLE2	Q86XL3	938 aa		31.63	■■■□□ 2.65
SPOCK3-222	ENST00000512681	EID1	Q9Y6B2	187 aa		31.63	■■■□□ 2.65
SPOCK3-222	ENST00000512681	DCAF11	Q8TEB1	546 aa		31.61	■■■□□ 2.65
SPOCK3-222	ENST00000512681	VGF	O15240	615 aa	Predicted RBP	31.6	■■■□□ 2.65
SPOCK3-222	ENST00000512681	STAC3	Q96MF2	364 aa		31.6	■■■□□ 2.65
SPOCK3-222	ENST00000512681	MYOM2	P54296	1465 aa		31.6	■■■□□ 2.65
SPOCK3-222	ENST00000512681	NUTM2D	Q5VT03	806 aa	Predicted RBP	31.59	■■■□□ 2.65
SPOCK3-222	ENST00000512681	POLR1A	O95602	1720 aa	Predicted RBP	31.58	■■■□□ 2.65
SPOCK3-222	ENST00000512681	NCKAP5L	Q9HCH0	1330 aa		31.56	■■■□□ 2.64
SPOCK3-222	ENST00000512681	MED14	O60244	1454 aa		31.55	■■■□□ 2.64
SPOCK3-222	ENST00000512681	NRXN1	Q9ULB1	1477 aa		31.55	■■■□□ 2.64
SPOCK3-222	ENST00000512681	ADGRF5	Q8IZF2	1346 aa		31.55	■■■□□ 2.64
SPOCK3-222	ENST00000512681	STRC	Q7RTU9	1775 aa		31.55	■■■□□ 2.64
SPOCK3-222	ENST00000512681	KDM2A	Q9Y2K7	1162 aa		31.54	■■■□□ 2.64
SPOCK3-222	ENST00000512681	PLEKHG1	Q9ULL1	1385 aa		31.54	■■■□□ 2.64
SPOCK3-222	ENST00000512681	NPHP4	O75161	1426 aa	Predicted RBP	31.49	■■■□□ 2.63
SPOCK3-222	ENST00000512681	PIK3C2G	O75747	1445 aa		31.49	■■■□□ 2.63
SPOCK3-222	ENST00000512681	SETBP1	Q9Y6X0	1596 aa		31.48	■■■□□ 2.63
SPOCK3-222	ENST00000512681	PRAG1	Q86YV5	1406 aa		31.47	■■■□□ 2.63
SPOCK3-222	ENST00000512681	NRXN3	Q9Y4C0	1643 aa		31.46	■■■□□ 2.63
SPOCK3-222	ENST00000512681	IQGAP1	P46940	1657 aa		31.45	■■■□□ 2.63
SPOCK3-222	ENST00000512681	NBPF8	Q3BBV2	869 aa		31.45	■■■□□ 2.62
SPOCK3-222	ENST00000512681	ADAMTS13	Q76LX8	1427 aa		31.43	■■■□□ 2.62
SPOCK3-222	ENST00000512681	SENP3	Q9H4L4	574 aa	Predicted RBP	31.41	■■■□□ 2.62
SPOCK3-222	ENST00000512681	RALGAPB	Q86X10	1494 aa		31.41	■■■□□ 2.62
SPOCK3-222	ENST00000512681	BCAN	Q96GW7	911 aa		31.4	■■■□□ 2.62
SPOCK3-222	ENST00000512681	ALK	Q9UM73	1620 aa		31.39	■■■□□ 2.62
SPOCK3-222	ENST00000512681	C14orf93	Q9H972	538 aa	Known RBP	31.39	■■■□□ 2.62
SPOCK3-222	ENST00000512681	DIP2A	Q14689	1571 aa		31.38	■■■□□ 2.61
SPOCK3-222	ENST00000512681	SLC26A8	Q96RN1	970 aa		31.37	■■■□□ 2.61
SPOCK3-222	ENST00000512681	TBX22	Q9Y458	520 aa		31.37	■■■□□ 2.61
SPOCK3-222	ENST00000512681	DMRT2	Q9Y5R5	561 aa		31.37	■■■□□ 2.61
SPOCK3-222	ENST00000512681	SETD1A	O15047	1707 aa	Known RBP	31.36	■■■□□ 2.61
SPOCK3-222	ENST00000512681	LAMC1	P11047	1609 aa		31.35	■■■□□ 2.61
SPOCK3-222	ENST00000512681	CFAP70	Q5T0N1	1121 aa		31.35	■■■□□ 2.61
SPOCK3-222	ENST00000512681	KIAA1210	Q9ULL0	1709 aa		31.34	■■■□□ 2.61
SPOCK3-222	ENST00000512681	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.33	■■■□□ 2.61
SPOCK3-222	ENST00000512681	TRPM1	Q7Z4N2	1603 aa		31.31	■■■□□ 2.6
SPOCK3-222	ENST00000512681	MET	P08581	1390 aa		31.29	■■■□□ 2.6
SPOCK3-222	ENST00000512681	ASXL1	Q8IXJ9	1541 aa		31.28	■■■□□ 2.6
SPOCK3-222	ENST00000512681	HSPA5	P11021	654 aa	Known RBP	31.27	■■■□□ 2.6
SPOCK3-222	ENST00000512681	PIK3R4	Q99570	1358 aa		31.27	■■■□□ 2.6
SPOCK3-222	ENST00000512681	ADGRB1	O14514	1584 aa		31.27	■■■□□ 2.6
SPOCK3-222	ENST00000512681	NBPF1	Q3BBV0	1214 aa		31.25	■■■□□ 2.59
SPOCK3-222	ENST00000512681	TMEM132E	Q6IEE7	984 aa		31.23	■■■□□ 2.59
SPOCK3-222	ENST00000512681	PTPRU	Q92729	1446 aa		31.21	■■■□□ 2.59
SPOCK3-222	ENST00000512681	GPRASP1	Q5JY77	1395 aa		31.2	■■■□□ 2.59
SPOCK3-222	ENST00000512681	ROCK2	O75116	1388 aa	Known RBP	31.2	■■■□□ 2.58
SPOCK3-222	ENST00000512681	CHD2	O14647	1828 aa	Known RBP	31.19	■■■□□ 2.58
SPOCK3-222	ENST00000512681	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.19	■■■□□ 2.58
SPOCK3-222	ENST00000512681	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.18	■■■□□ 2.58
SPOCK3-222	ENST00000512681	LRPPRC	P42704	1394 aa	Known RBP	31.17	■■■□□ 2.58
SPOCK3-222	ENST00000512681	USP47	Q96K76	1375 aa		31.16	■■■□□ 2.58
SPOCK3-222	ENST00000512681	KCNA6	P17658	529 aa		31.16	■■■□□ 2.58
SPOCK3-222	ENST00000512681	NWD1	Q149M9	1564 aa		31.16	■■■□□ 2.58
SPOCK3-222	ENST00000512681	XRN1	Q8IZH2	1706 aa	Known RBP	31.15	■■■□□ 2.58
SPOCK3-222	ENST00000512681	AMOTL2	Q9Y2J4	779 aa		31.14	■■■□□ 2.58
SPOCK3-222	ENST00000512681	ABCC11	Q96J66	1382 aa		31.14	■■■□□ 2.58
SPOCK3-222	ENST00000512681	TECPR2	O15040	1411 aa		31.12	■■■□□ 2.57
SPOCK3-222	ENST00000512681	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.12	■■■□□ 2.57
SPOCK3-222	ENST00000512681	STRCP1	A6NGW2	1772 aa		31.11	■■■□□ 2.57
SPOCK3-222	ENST00000512681	KNDC1	Q76NI1	1749 aa		31.1	■■■□□ 2.57
SPOCK3-222	ENST00000512681	CARD11	Q9BXL7	1154 aa		31.1	■■■□□ 2.57
SPOCK3-222	ENST00000512681	MIER1	Q8N108	512 aa		31.09	■■■□□ 2.57
SPOCK3-222	ENST00000512681	STK26	Q9P289	416 aa		31.09	■■■□□ 2.57
SPOCK3-222	ENST00000512681	DLC1	Q96QB1	1528 aa		31.08	■■■□□ 2.57
SPOCK3-222	ENST00000512681	CPS1	P31327	1500 aa		31.07	■■■□□ 2.56
SPOCK3-222	ENST00000512681	NKTR	P30414	1462 aa	Known RBP	31.07	■■■□□ 2.56
SPOCK3-222	ENST00000512681	PTCH1	Q13635	1447 aa		31.07	■■■□□ 2.56
SPOCK3-222	ENST00000512681	DDX10	Q13206	875 aa	Known RBP	31.06	■■■□□ 2.56
SPOCK3-222	ENST00000512681	TRAK1	Q9UPV9	953 aa		31.06	■■■□□ 2.56
SPOCK3-222	ENST00000512681	SIRT1	Q96EB6	747 aa		31.05	■■■□□ 2.56
SPOCK3-222	ENST00000512681	ROBO2	Q9HCK4	1378 aa		31.04	■■■□□ 2.56
SPOCK3-222	ENST00000512681	WASHC2A	Q641Q2	1341 aa		31.04	■■■□□ 2.56
SPOCK3-222	ENST00000512681	CCDC7	Q96M83	1385 aa		31.03	■■■□□ 2.56
SPOCK3-222	ENST00000512681	FAM135B	Q49AJ0	1406 aa		31.02	■■■□□ 2.56
SPOCK3-222	ENST00000512681	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.02	■■■□□ 2.56
SPOCK3-222	ENST00000512681	LTBP4	Q8N2S1	1624 aa		31.02	■■■□□ 2.56
SPOCK3-222	ENST00000512681	PROSER2	Q86WR7	435 aa	Predicted RBP	30.96	■■■□□ 2.55
SPOCK3-222	ENST00000512681	EIF3A	Q14152	1382 aa	Known RBP	30.96	■■■□□ 2.55
SPOCK3-222	ENST00000512681	PLEKHH1	Q9ULM0	1364 aa		30.96	■■■□□ 2.55
SPOCK3-222	ENST00000512681	WAPL	Q7Z5K2	1190 aa		30.95	■■■□□ 2.55
SPOCK3-222	ENST00000512681	PRAM1	Q96QH2	718 aa		30.95	■■■□□ 2.55
SPOCK3-222	ENST00000512681	LRRC7	Q96NW7	1537 aa		30.95	■■■□□ 2.55
SPOCK3-222	ENST00000512681	POGK	Q9P215	609 aa		30.92	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms