RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 NWD1Q149M9 1564 aa19.74■□□□□ 0.75
DDX41-215ENST00000512431 LMTK2Q8IWU2 1503 aa19.73■□□□□ 0.75
DDX41-215ENST00000512431 UPF1Q92900 1129 aaKnown RBP eCLIP19.73■□□□□ 0.75
DDX41-215ENST00000512431 ANKRD30AQ9BXX3 1397 aa19.72■□□□□ 0.75
DDX41-215ENST00000512431 ADGRB3O60242 1522 aa19.72■□□□□ 0.75
DDX41-215ENST00000512431 TRIM52Q96A61 297 aa19.72■□□□□ 0.75
DDX41-215ENST00000512431 NOS1P29475 1434 aa19.71■□□□□ 0.75
DDX41-215ENST00000512431 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
DDX41-215ENST00000512431 DAPK1P53355 1430 aa19.7■□□□□ 0.74
DDX41-215ENST00000512431 FGD6Q6ZV73 1430 aa19.7■□□□□ 0.74
DDX41-215ENST00000512431 NCOA3Q9Y6Q9 1424 aa19.69■□□□□ 0.74
DDX41-215ENST00000512431 CROCC2H7BZ55 1655 aa19.69■□□□□ 0.74
DDX41-215ENST00000512431 APLP2Q06481 763 aa19.69■□□□□ 0.74
DDX41-215ENST00000512431 PLEKHG1Q9ULL1 1385 aa19.69■□□□□ 0.74
DDX41-215ENST00000512431 ATF3P18847 181 aa19.68■□□□□ 0.74
DDX41-215ENST00000512431 RXRBP28702 533 aa19.68■□□□□ 0.74
DDX41-215ENST00000512431 CADPS2Q86UW7 1296 aa19.68■□□□□ 0.74
DDX41-215ENST00000512431 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
DDX41-215ENST00000512431 TBX22Q9Y458 520 aa19.67■□□□□ 0.74
DDX41-215ENST00000512431 COL16A1Q07092 1604 aaPredicted RBP19.66■□□□□ 0.74
DDX41-215ENST00000512431 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.65■□□□□ 0.74
DDX41-215ENST00000512431 C19orf44Q9H6X5 657 aa19.65■□□□□ 0.74
DDX41-215ENST00000512431 RIMS2Q9UQ26 1411 aa19.65■□□□□ 0.74
DDX41-215ENST00000512431 LRP6O75581 1613 aa19.65■□□□□ 0.74
DDX41-215ENST00000512431 ZFYVE9O95405 1425 aa19.63■□□□□ 0.73
DDX41-215ENST00000512431 CHGAP10645 457 aaKnown RBP19.63■□□□□ 0.73
DDX41-215ENST00000512431 CHD2O14647 1828 aaKnown RBP19.62■□□□□ 0.73
DDX41-215ENST00000512431 RPRD2Q5VT52 1461 aaKnown RBP19.62■□□□□ 0.73
DDX41-215ENST00000512431 NUTM2BA6NNL0 878 aaPredicted RBP19.61■□□□□ 0.73
DDX41-215ENST00000512431 NUTM2EB1AL46 878 aaPredicted RBP19.61■□□□□ 0.73
DDX41-215ENST00000512431 NUTM2AQ8IVF1 878 aaPredicted RBP19.61■□□□□ 0.73
DDX41-215ENST00000512431 AHDC1Q5TGY3 1603 aaPredicted RBP19.58■□□□□ 0.73
DDX41-215ENST00000512431 LOC105371045A0A1W2PR82 267 aa19.58■□□□□ 0.72
DDX41-215ENST00000512431 PIK3R4Q99570 1358 aa19.57■□□□□ 0.72
DDX41-215ENST00000512431 SHPRHQ149N8 1683 aa19.57■□□□□ 0.72
DDX41-215ENST00000512431 CDK12Q9NYV4 1490 aaPredicted RBP19.56■□□□□ 0.72
DDX41-215ENST00000512431 NUTM2DQ5VT03 806 aaPredicted RBP19.56■□□□□ 0.72
DDX41-215ENST00000512431 BRINP3Q76B58 766 aa19.56■□□□□ 0.72
DDX41-215ENST00000512431 AFF2P51816 1311 aa19.55■□□□□ 0.72
DDX41-215ENST00000512431 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.55■□□□□ 0.72
DDX41-215ENST00000512431 AMOTL2Q9Y2J4 779 aa19.54■□□□□ 0.72
DDX41-215ENST00000512431 GCC2Q8IWJ2 1684 aa19.54■□□□□ 0.72
DDX41-215ENST00000512431 TMEM131LA2VDJ0 1609 aa19.54■□□□□ 0.72
DDX41-215ENST00000512431 ANKRD50Q9ULJ7 1429 aa19.53■□□□□ 0.72
DDX41-215ENST00000512431 DIP2AQ14689 1571 aa19.53■□□□□ 0.72
DDX41-215ENST00000512431 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.72
DDX41-215ENST00000512431 LRRC59Q96AG4 307 aaKnown RBP19.52■□□□□ 0.72
DDX41-215ENST00000512431 ADGRL2O95490 1459 aa19.52■□□□□ 0.72
DDX41-215ENST00000512431 MYO5BQ9ULV0 1848 aa19.51■□□□□ 0.71
DDX41-215ENST00000512431 FAM50AQ14320 339 aaKnown RBP19.51■□□□□ 0.71
DDX41-215ENST00000512431 RBM6P78332 1123 aaKnown RBP19.5■□□□□ 0.71
DDX41-215ENST00000512431 QTRT2Q9H974 415 aaKnown RBP19.5■□□□□ 0.71
DDX41-215ENST00000512431 C8orf37Q96NL8 207 aa19.49■□□□□ 0.71
DDX41-215ENST00000512431 TRPM2O94759 1503 aa19.49■□□□□ 0.71
DDX41-215ENST00000512431 DCCP43146 1447 aa19.48■□□□□ 0.71
DDX41-215ENST00000512431 SETD5Q9C0A6 1442 aa19.48■□□□□ 0.71
DDX41-215ENST00000512431 FOXD1Q16676 465 aa19.47■□□□□ 0.71
DDX41-215ENST00000512431 NGLY1Q96IV0 654 aa19.45■□□□□ 0.7
DDX41-215ENST00000512431 ASXL1Q8IXJ9 1541 aa19.45■□□□□ 0.7
DDX41-215ENST00000512431 PTPRUQ92729 1446 aa19.43■□□□□ 0.7
DDX41-215ENST00000512431 RGS12O14924 1447 aa19.42■□□□□ 0.7
DDX41-215ENST00000512431 MST1RQ04912 1400 aa19.42■□□□□ 0.7
DDX41-215ENST00000512431 ADAMTS2O95450 1211 aa19.39■□□□□ 0.69
DDX41-215ENST00000512431 ATAD2Q6PL18 1390 aa19.39■□□□□ 0.69
DDX41-215ENST00000512431 PNPLA6Q8IY17 1366 aa19.39■□□□□ 0.69
DDX41-215ENST00000512431 ZNF326Q5BKZ1 582 aaKnown RBP19.38■□□□□ 0.69
DDX41-215ENST00000512431 DDX17Q92841 729 aaKnown RBP19.38■□□□□ 0.69
DDX41-215ENST00000512431 E9PCH4 1651 aa19.37■□□□□ 0.69
DDX41-215ENST00000512431 NHSL1Q5SYE7 1610 aa19.37■□□□□ 0.69
DDX41-215ENST00000512431 UNC13BO14795 1591 aa19.37■□□□□ 0.69
DDX41-215ENST00000512431 ZRANB1Q9UGI0 708 aa19.37■□□□□ 0.69
DDX41-215ENST00000512431 USP21Q9UK80 565 aa19.36■□□□□ 0.69
DDX41-215ENST00000512431 TRPC5Q9UL62 973 aaPredicted RBP19.35■□□□□ 0.69
DDX41-215ENST00000512431 NUP155O75694 1391 aa19.34■□□□□ 0.69
DDX41-215ENST00000512431 XRN1Q8IZH2 1706 aaKnown RBP19.33■□□□□ 0.68
DDX41-215ENST00000512431 ADGRL3Q9HAR2 1447 aa19.33■□□□□ 0.68
DDX41-215ENST00000512431 METP08581 1390 aa19.32■□□□□ 0.68
DDX41-215ENST00000512431 SETBP1Q9Y6X0 1596 aa19.32■□□□□ 0.68
DDX41-215ENST00000512431 IQGAP3Q86VI3 1631 aa19.31■□□□□ 0.68
DDX41-215ENST00000512431 ROCK1Q13464 1354 aa19.3■□□□□ 0.68
DDX41-215ENST00000512431 CCDC125Q86Z20 511 aa19.29■□□□□ 0.68
DDX41-215ENST00000512431 SRCAPQ6ZRS2 3230 aa19.29■□□□□ 0.68
DDX41-215ENST00000512431 C1orf167Q5SNV9 1468 aa19.28■□□□□ 0.68
DDX41-215ENST00000512431 NRXN3Q9Y4C0 1643 aa19.28■□□□□ 0.68
DDX41-215ENST00000512431 FNBP4Q8N3X1 1017 aaPredicted RBP19.27■□□□□ 0.68
DDX41-215ENST00000512431 SOS2Q07890 1332 aaPredicted RBP19.26■□□□□ 0.67
DDX41-215ENST00000512431 PTCH1Q13635 1447 aa19.26■□□□□ 0.67
DDX41-215ENST00000512431 ORAI2Q96SN7 254 aa19.25■□□□□ 0.67
DDX41-215ENST00000512431 NALCNQ8IZF0 1738 aa19.22■□□□□ 0.67
DDX41-215ENST00000512431 ITGAEP38570 1179 aa19.22■□□□□ 0.67
DDX41-215ENST00000512431 ATRNO75882 1429 aa19.21■□□□□ 0.67
DDX41-215ENST00000512431 LAMC1P11047 1609 aa19.19■□□□□ 0.66
DDX41-215ENST00000512431 VGFO15240 615 aaPredicted RBP19.19■□□□□ 0.66
DDX41-215ENST00000512431 SPHKAPQ2M3C7 1700 aa19.19■□□□□ 0.66
DDX41-215ENST00000512431 GJD4Q96KN9 370 aaPredicted RBP19.18■□□□□ 0.66
DDX41-215ENST00000512431 NPHP3Q7Z494 1330 aa19.18■□□□□ 0.66
DDX41-215ENST00000512431 NEXMIFQ5QGS0 1516 aa19.16■□□□□ 0.66
DDX41-215ENST00000512431 ESCO1Q5FWF5 840 aa19.16■□□□□ 0.66
DDX41-215ENST00000512431 ROBO2Q9HCK4 1378 aa19.15■□□□□ 0.66
DDX41-215ENST00000512431 BCL9LQ86UU0 1499 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms