RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.44
PDLIM5-216ENST00000511767 FOXD1Q16676 465 aa24.07■■□□□ 1.44
PDLIM5-216ENST00000511767 BCANQ96GW7 911 aa24.07■■□□□ 1.44
PDLIM5-216ENST00000511767 KCNA6P17658 529 aa24.05■■□□□ 1.44
PDLIM5-216ENST00000511767 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
PDLIM5-216ENST00000511767 UBAP1LF5GYI3 381 aa24.04■■□□□ 1.44
PDLIM5-216ENST00000511767 PPP1R15AO75807 674 aaPredicted RBP24.04■■□□□ 1.44
PDLIM5-216ENST00000511767 TBX22Q9Y458 520 aa24.04■■□□□ 1.44
PDLIM5-216ENST00000511767 CPS1P31327 1500 aa24.04■■□□□ 1.44
PDLIM5-216ENST00000511767 PLEKHG1Q9ULL1 1385 aa24.03■■□□□ 1.44
PDLIM5-216ENST00000511767 MYO5BQ9ULV0 1848 aa24.02■■□□□ 1.44
PDLIM5-216ENST00000511767 ZNF326Q5BKZ1 582 aaKnown RBP24.01■■□□□ 1.43
PDLIM5-216ENST00000511767 HRCP23327 699 aa24■■□□□ 1.43
PDLIM5-216ENST00000511767 RAB3GAP2Q9H2M9 1393 aa23.98■■□□□ 1.43
PDLIM5-216ENST00000511767 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
PDLIM5-216ENST00000511767 STRCP1A6NGW2 1772 aa23.97■■□□□ 1.43
PDLIM5-216ENST00000511767 TOM1O60784 492 aa23.97■■□□□ 1.43
PDLIM5-216ENST00000511767 LRRC7Q96NW7 1537 aa23.97■■□□□ 1.43
PDLIM5-216ENST00000511767 TRPM2O94759 1503 aa23.95■■□□□ 1.43
PDLIM5-216ENST00000511767 PROSER2Q86WR7 435 aaPredicted RBP23.94■■□□□ 1.42
PDLIM5-216ENST00000511767 ADAMTS13Q76LX8 1427 aa23.93■■□□□ 1.42
PDLIM5-216ENST00000511767 CLTCL1P53675 1640 aa23.92■■□□□ 1.42
PDLIM5-216ENST00000511767 RPGRIP1LQ68CZ1 1315 aa23.91■■□□□ 1.42
PDLIM5-216ENST00000511767 RBM33Q96EV2 1170 aaKnown RBP23.9■■□□□ 1.42
PDLIM5-216ENST00000511767 VGFO15240 615 aaPredicted RBP23.89■■□□□ 1.41
PDLIM5-216ENST00000511767 PIP4K2BP78356 416 aa23.87■■□□□ 1.41
PDLIM5-216ENST00000511767 TMEM94Q12767 1356 aa23.87■■□□□ 1.41
PDLIM5-216ENST00000511767 RGL3Q3MIN7 710 aa23.86■■□□□ 1.41
PDLIM5-216ENST00000511767 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
PDLIM5-216ENST00000511767 PIK3R4Q99570 1358 aa23.85■■□□□ 1.41
PDLIM5-216ENST00000511767 CCDC144AA2RUR9 1427 aa23.83■■□□□ 1.4
PDLIM5-216ENST00000511767 KIF1BO60333 1816 aa23.82■■□□□ 1.4
PDLIM5-216ENST00000511767 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
PDLIM5-216ENST00000511767 NEXMIFQ5QGS0 1516 aa23.8■■□□□ 1.4
PDLIM5-216ENST00000511767 CHD2O14647 1828 aaKnown RBP23.8■■□□□ 1.4
PDLIM5-216ENST00000511767 SPATA31E1Q6ZUB1 1445 aa23.8■■□□□ 1.4
PDLIM5-216ENST00000511767 METP08581 1390 aa23.79■■□□□ 1.4
PDLIM5-216ENST00000511767 PTPRUQ92729 1446 aa23.79■■□□□ 1.4
PDLIM5-216ENST00000511767 ALKQ9UM73 1620 aa23.79■■□□□ 1.4
PDLIM5-216ENST00000511767 HSPA1LP34931 641 aa23.78■■□□□ 1.4
PDLIM5-216ENST00000511767 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
PDLIM5-216ENST00000511767 NKTRP30414 1462 aaKnown RBP23.76■■□□□ 1.39
PDLIM5-216ENST00000511767 XIRP1Q702N8 1843 aaKnown RBP23.76■■□□□ 1.39
PDLIM5-216ENST00000511767 NWD1Q149M9 1564 aa23.76■■□□□ 1.39
PDLIM5-216ENST00000511767 SETBP1Q9Y6X0 1596 aa23.76■■□□□ 1.39
PDLIM5-216ENST00000511767 ADGRF5Q8IZF2 1346 aa23.76■■□□□ 1.39
PDLIM5-216ENST00000511767 NCOA3Q9Y6Q9 1424 aa23.74■■□□□ 1.39
PDLIM5-216ENST00000511767 DIP2AQ14689 1571 aa23.74■■□□□ 1.39
PDLIM5-216ENST00000511767 NRXN3Q9Y4C0 1643 aa23.73■■□□□ 1.39
PDLIM5-216ENST00000511767 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
PDLIM5-216ENST00000511767 SLAIN2Q9P270 581 aa23.72■■□□□ 1.39
PDLIM5-216ENST00000511767 MSH6P52701 1360 aa23.69■■□□□ 1.38
PDLIM5-216ENST00000511767 C14orf37Q86TY3 774 aa23.68■■□□□ 1.38
PDLIM5-216ENST00000511767 FAM135BQ49AJ0 1406 aa23.67■■□□□ 1.38
PDLIM5-216ENST00000511767 PPLO60437 1756 aa23.65■■□□□ 1.38
PDLIM5-216ENST00000511767 C14orf93Q9H972 538 aaKnown RBP23.64■■□□□ 1.37
PDLIM5-216ENST00000511767 ATF3P18847 181 aa23.63■■□□□ 1.37
PDLIM5-216ENST00000511767 CADPS2Q86UW7 1296 aa23.63■■□□□ 1.37
PDLIM5-216ENST00000511767 TMEM132EQ6IEE7 984 aa23.62■■□□□ 1.37
PDLIM5-216ENST00000511767 TRIM26Q12899 539 aaPredicted RBP23.59■■□□□ 1.37
PDLIM5-216ENST00000511767 CFAP70Q5T0N1 1121 aa23.59■■□□□ 1.37
PDLIM5-216ENST00000511767 ROBO2Q9HCK4 1378 aa23.58■■□□□ 1.37
PDLIM5-216ENST00000511767 DCAF11Q8TEB1 546 aa23.58■■□□□ 1.37
PDLIM5-216ENST00000511767 STAC3Q96MF2 364 aa23.58■■□□□ 1.37
PDLIM5-216ENST00000511767 KDM2AQ9Y2K7 1162 aa23.58■■□□□ 1.37
PDLIM5-216ENST00000511767 XRN1Q8IZH2 1706 aaKnown RBP23.58■■□□□ 1.37
PDLIM5-216ENST00000511767 STK26Q9P289 416 aa23.57■■□□□ 1.36
PDLIM5-216ENST00000511767 PIK3C2GO75747 1445 aa23.56■■□□□ 1.36
PDLIM5-216ENST00000511767 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
PDLIM5-216ENST00000511767 ABCC11Q96J66 1382 aa23.54■■□□□ 1.36
PDLIM5-216ENST00000511767 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
PDLIM5-216ENST00000511767 WAPLQ7Z5K2 1190 aa23.53■■□□□ 1.36
PDLIM5-216ENST00000511767 SIRT1Q96EB6 747 aa23.53■■□□□ 1.36
PDLIM5-216ENST00000511767 NRXN1Q9ULB1 1477 aa23.53■■□□□ 1.36
PDLIM5-216ENST00000511767 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
PDLIM5-216ENST00000511767 IFT172Q9UG01 1749 aa23.53■■□□□ 1.36
PDLIM5-216ENST00000511767 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
PDLIM5-216ENST00000511767 PRAG1Q86YV5 1406 aa23.51■■□□□ 1.35
PDLIM5-216ENST00000511767 PTCH1Q13635 1447 aa23.5■■□□□ 1.35
PDLIM5-216ENST00000511767 MYOM2P54296 1465 aa23.49■■□□□ 1.35
PDLIM5-216ENST00000511767 BRINP3Q76B58 766 aa23.49■■□□□ 1.35
PDLIM5-216ENST00000511767 DISP3Q9P2K9 1392 aa23.49■■□□□ 1.35
PDLIM5-216ENST00000511767 DCCP43146 1447 aa23.49■■□□□ 1.35
PDLIM5-216ENST00000511767 ADGRL3Q9HAR2 1447 aa23.49■■□□□ 1.35
PDLIM5-216ENST00000511767 SIN3AQ96ST3 1273 aa23.47■■□□□ 1.35
PDLIM5-216ENST00000511767 YTHDC2Q9H6S0 1430 aaKnown RBP23.46■■□□□ 1.35
PDLIM5-216ENST00000511767 ROBO1Q9Y6N7 1651 aa23.46■■□□□ 1.35
PDLIM5-216ENST00000511767 TECPR2O15040 1411 aa23.45■■□□□ 1.34
PDLIM5-216ENST00000511767 MST1RQ04912 1400 aa23.44■■□□□ 1.34
PDLIM5-216ENST00000511767 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
PDLIM5-216ENST00000511767 PLEKHH1Q9ULM0 1364 aa23.42■■□□□ 1.34
PDLIM5-216ENST00000511767 ORAI2Q96SN7 254 aa23.4■■□□□ 1.34
PDLIM5-216ENST00000511767 L3MBTL2Q969R5 705 aa23.39■■□□□ 1.33
PDLIM5-216ENST00000511767 NEUROD1Q13562 356 aa23.38■■□□□ 1.33
PDLIM5-216ENST00000511767 PRAM1Q96QH2 718 aa23.38■■□□□ 1.33
PDLIM5-216ENST00000511767 TRAK1Q9UPV9 953 aa23.38■■□□□ 1.33
PDLIM5-216ENST00000511767 C1orf167Q5SNV9 1468 aa23.37■■□□□ 1.33
PDLIM5-216ENST00000511767 ILDR2Q71H61 639 aa23.37■■□□□ 1.33
PDLIM5-216ENST00000511767 DDX17Q92841 729 aaKnown RBP23.37■■□□□ 1.33
PDLIM5-216ENST00000511767 POGKQ9P215 609 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms