RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 LRRFIP1Q32MZ4 808 aaKnown RBP7.15□□□□□ -1.26
USP38-203ENST00000511739 KIF3BO15066 747 aa7.15□□□□□ -1.26
USP38-203ENST00000511739 L3MBTL2Q969R5 705 aa7.15□□□□□ -1.26
USP38-203ENST00000511739 KIAA0586Q9BVV6 1533 aa7.15□□□□□ -1.27
USP38-203ENST00000511739 NOL8Q76FK4 1167 aaKnown RBP7.15□□□□□ -1.27
USP38-203ENST00000511739 NGEFQ8N5V2 710 aa7.15□□□□□ -1.27
USP38-203ENST00000511739 PPP1R1BQ9UD71 204 aaPredicted RBP7.15□□□□□ -1.27
USP38-203ENST00000511739 WASHC2CQ9Y4E1 1318 aa7.15□□□□□ -1.27
USP38-203ENST00000511739 NUTM2DQ5VT03 806 aaPredicted RBP7.15□□□□□ -1.27
USP38-203ENST00000511739 CHMP4CQ96CF2 233 aa7.15□□□□□ -1.27
USP38-203ENST00000511739 CCDC47Q96A33 483 aaKnown RBP7.14□□□□□ -1.27
USP38-203ENST00000511739 RTN4Q9NQC3 1192 aaKnown RBP7.14□□□□□ -1.27
USP38-203ENST00000511739 SMC4Q9NTJ3 1288 aa7.14□□□□□ -1.27
USP38-203ENST00000511739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP38-203ENST00000511739 H3BQV1 296 aa7.14□□□□□ -1.27
USP38-203ENST00000511739 TEFQ10587 303 aa7.14□□□□□ -1.27
USP38-203ENST00000511739 IFFO2Q5TF58 517 aa7.14□□□□□ -1.27
USP38-203ENST00000511739 CPLX2Q6PUV4 134 aaKnown RBP7.14□□□□□ -1.27
USP38-203ENST00000511739 PRDM2Q13029 1718 aa7.14□□□□□ -1.27
USP38-203ENST00000511739 HFM1A2PYH4 1435 aa7.14□□□□□ -1.27
USP38-203ENST00000511739 WASHC2AQ641Q2 1341 aa7.14□□□□□ -1.27
USP38-203ENST00000511739 TNNT3P45378 269 aaPredicted RBP7.14□□□□□ -1.27
USP38-203ENST00000511739 NEXNQ0ZGT2 675 aa7.14□□□□□ -1.27
USP38-203ENST00000511739 TPM1P09493 284 aa7.13□□□□□ -1.27
USP38-203ENST00000511739 RALBP1Q15311 655 aa7.13□□□□□ -1.27
USP38-203ENST00000511739 FAM184AQ8NB25 1140 aa7.13□□□□□ -1.27
USP38-203ENST00000511739 IQGAP2Q13576 1575 aa7.13□□□□□ -1.27
USP38-203ENST00000511739 KTN1Q86UP2 1357 aaKnown RBP7.13□□□□□ -1.27
USP38-203ENST00000511739 STAC3Q96MF2 364 aa7.13□□□□□ -1.27
USP38-203ENST00000511739 WWC2Q6AWC2 1192 aa7.13□□□□□ -1.27
USP38-203ENST00000511739 PCMTD1Q96MG8 357 aaPredicted RBP7.13□□□□□ -1.27
USP38-203ENST00000511739 NOP58Q9Y2X3 529 aaKnown RBP7.13□□□□□ -1.27
USP38-203ENST00000511739 APPP05067 770 aa7.12□□□□□ -1.27
USP38-203ENST00000511739 THOC2Q8NI27 1593 aaKnown RBP7.12□□□□□ -1.27
USP38-203ENST00000511739 EIF3AQ14152 1382 aaKnown RBP7.12□□□□□ -1.27
USP38-203ENST00000511739 TRIM29Q14134 588 aa7.12□□□□□ -1.27
USP38-203ENST00000511739 ODF2Q5BJF6 829 aa7.12□□□□□ -1.27
USP38-203ENST00000511739 SYNJ2O15056 1496 aa7.12□□□□□ -1.27
USP38-203ENST00000511739 PCF11O94913 1555 aaKnown RBP7.12□□□□□ -1.27
USP38-203ENST00000511739 TROQ12816 1431 aaPredicted RBP7.11□□□□□ -1.27
USP38-203ENST00000511739 CCDC70Q6NSX1 233 aa7.11□□□□□ -1.27
USP38-203ENST00000511739 HNRNPMP52272 730 aaKnown RBP eCLIP7.11□□□□□ -1.27
USP38-203ENST00000511739 CT47A1Q5JQC4 288 aaPredicted RBP7.11□□□□□ -1.27
USP38-203ENST00000511739 PMFBP1Q8TBY8 1022 aa7.11□□□□□ -1.27
USP38-203ENST00000511739 URB2Q14146 1524 aaKnown RBP7.11□□□□□ -1.27
USP38-203ENST00000511739 TMEM132AQ24JP5 1023 aa7.11□□□□□ -1.27
USP38-203ENST00000511739 MAGI1Q96QZ7 1491 aaPredicted RBP7.11□□□□□ -1.27
USP38-203ENST00000511739 TCERG1O14776 1098 aaKnown RBP7.11□□□□□ -1.27
USP38-203ENST00000511739 IPO7O95373 1038 aaKnown RBP7.11□□□□□ -1.27
USP38-203ENST00000511739 MFAP1P55081 439 aaKnown RBP7.11□□□□□ -1.27
USP38-203ENST00000511739 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.1□□□□□ -1.27
USP38-203ENST00000511739 SNAPC4Q5SXM2 1469 aa7.1□□□□□ -1.27
USP38-203ENST00000511739 PSME1Q06323 249 aa7.1□□□□□ -1.27
USP38-203ENST00000511739 ROCK1Q13464 1354 aa7.1□□□□□ -1.27
USP38-203ENST00000511739 CCDC144AA2RUR9 1427 aa7.1□□□□□ -1.27
USP38-203ENST00000511739 GZF1Q9H116 711 aaPredicted RBP7.1□□□□□ -1.27
USP38-203ENST00000511739 PATL2C9JE40 543 aaKnown RBP7.1□□□□□ -1.27
USP38-203ENST00000511739 IKQ13123 557 aaPredicted RBP7.1□□□□□ -1.27
USP38-203ENST00000511739 ARID3AQ99856 593 aa7.1□□□□□ -1.27
USP38-203ENST00000511739 PLEKHH2Q8IVE3 1493 aa7.1□□□□□ -1.27
USP38-203ENST00000511739 EPRSP07814 1512 aaKnown RBP7.09□□□□□ -1.27
USP38-203ENST00000511739 ATF3P18847 181 aa7.09□□□□□ -1.27
USP38-203ENST00000511739 ANKRD20A12PQ8NF67 263 aa7.09□□□□□ -1.27
USP38-203ENST00000511739 RILPL2Q969X0 211 aa7.09□□□□□ -1.27
USP38-203ENST00000511739 TRDNQ13061 729 aa7.09□□□□□ -1.27
USP38-203ENST00000511739 MCTP1Q6DN14 999 aa7.09□□□□□ -1.27
USP38-203ENST00000511739 CCAR2Q8N163 923 aaKnown RBP7.09□□□□□ -1.27
USP38-203ENST00000511739 COG3Q96JB2 828 aa7.09□□□□□ -1.27
USP38-203ENST00000511739 C9orf78Q9NZ63 289 aaPredicted RBP7.09□□□□□ -1.27
USP38-203ENST00000511739 ERICH2A1L162 156 aa7.09□□□□□ -1.27
USP38-203ENST00000511739 ST18O60284 1047 aa7.09□□□□□ -1.27
USP38-203ENST00000511739 EIF2S2P20042 333 aaKnown RBP7.09□□□□□ -1.28
USP38-203ENST00000511739 SLKQ9H2G2 1235 aaPredicted RBP7.09□□□□□ -1.28
USP38-203ENST00000511739 CPLX1O14810 134 aa7.08□□□□□ -1.28
USP38-203ENST00000511739 PHF14O94880 888 aa7.08□□□□□ -1.28
USP38-203ENST00000511739 ANKRD50Q9ULJ7 1429 aa7.08□□□□□ -1.28
USP38-203ENST00000511739 ZFYVE27Q5T4F4 411 aa7.08□□□□□ -1.28
USP38-203ENST00000511739 CLUAP1Q96AJ1 413 aa7.08□□□□□ -1.28
USP38-203ENST00000511739 BECN2A8MW95 431 aa7.08□□□□□ -1.28
USP38-203ENST00000511739 GOLGA6L19H0YKK7 550 aa7.08□□□□□ -1.28
USP38-203ENST00000511739 CYB5RLQ6IPT4 315 aa7.08□□□□□ -1.28
USP38-203ENST00000511739 DDX58O95786 925 aaKnown RBP7.07□□□□□ -1.28
USP38-203ENST00000511739 RRP12Q5JTH9 1297 aaKnown RBP7.07□□□□□ -1.28
USP38-203ENST00000511739 NFXL1Q6ZNB6 911 aa7.07□□□□□ -1.28
USP38-203ENST00000511739 SETQ01105 290 aaPredicted RBP7.07□□□□□ -1.28
USP38-203ENST00000511739 DIAPH3Q9NSV4 1193 aa7.07□□□□□ -1.28
USP38-203ENST00000511739 SLC4A3P48751 1232 aa7.07□□□□□ -1.28
USP38-203ENST00000511739 FOXD4L1Q9NU39 408 aa7.07□□□□□ -1.28
USP38-203ENST00000511739 KIF15Q9NS87 1388 aa7.07□□□□□ -1.28
USP38-203ENST00000511739 FOXD4L5Q5VV16 416 aaPredicted RBP7.07□□□□□ -1.28
USP38-203ENST00000511739 FOXD4L4Q8WXT5 416 aaPredicted RBP7.07□□□□□ -1.28
USP38-203ENST00000511739 TRAK1Q9UPV9 953 aa7.07□□□□□ -1.28
USP38-203ENST00000511739 CTTNBP2Q8WZ74 1663 aa7.07□□□□□ -1.28
USP38-203ENST00000511739 CCDC27Q2M243 656 aa7.06□□□□□ -1.28
USP38-203ENST00000511739 AKNAQ7Z591 1439 aa7.06□□□□□ -1.28
USP38-203ENST00000511739 FYB1O15117 783 aa7.06□□□□□ -1.28
USP38-203ENST00000511739 PDE3BQ13370 1112 aa7.06□□□□□ -1.28
USP38-203ENST00000511739 GRIN2AQ12879 1464 aa7.06□□□□□ -1.28
USP38-203ENST00000511739 ELL2O00472 640 aaPredicted RBP7.06□□□□□ -1.28
USP38-203ENST00000511739 RAPGEF4Q8WZA2 1011 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms