RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.39■□□□□ 0.37
SH3RF1-205ENST00000511421 PLEKHG1Q9ULL1 1385 aa17.39■□□□□ 0.37
SH3RF1-205ENST00000511421 UBAP1LF5GYI3 381 aa17.39■□□□□ 0.37
SH3RF1-205ENST00000511421 TRPM2O94759 1503 aa17.38■□□□□ 0.37
SH3RF1-205ENST00000511421 LRRC7Q96NW7 1537 aa17.38■□□□□ 0.37
SH3RF1-205ENST00000511421 PPP1R15AO75807 674 aaPredicted RBP17.38■□□□□ 0.37
SH3RF1-205ENST00000511421 NUTM2DQ5VT03 806 aaPredicted RBP17.37■□□□□ 0.37
SH3RF1-205ENST00000511421 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
SH3RF1-205ENST00000511421 CLTCL1P53675 1640 aa17.36■□□□□ 0.37
SH3RF1-205ENST00000511421 KCNA6P17658 529 aa17.36■□□□□ 0.37
SH3RF1-205ENST00000511421 BCANQ96GW7 911 aa17.36■□□□□ 0.37
SH3RF1-205ENST00000511421 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
SH3RF1-205ENST00000511421 MPHOSPH9Q99550 1183 aa17.35■□□□□ 0.37
SH3RF1-205ENST00000511421 FOXD1Q16676 465 aa17.34■□□□□ 0.37
SH3RF1-205ENST00000511421 TBX22Q9Y458 520 aa17.33■□□□□ 0.37
SH3RF1-205ENST00000511421 ADAMTS13Q76LX8 1427 aa17.33■□□□□ 0.36
SH3RF1-205ENST00000511421 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
SH3RF1-205ENST00000511421 TOM1O60784 492 aa17.32■□□□□ 0.36
SH3RF1-205ENST00000511421 ZNF326Q5BKZ1 582 aaKnown RBP17.32■□□□□ 0.36
SH3RF1-205ENST00000511421 RAB3GAP2Q9H2M9 1393 aa17.31■□□□□ 0.36
SH3RF1-205ENST00000511421 ALKQ9UM73 1620 aa17.3■□□□□ 0.36
SH3RF1-205ENST00000511421 NWD1Q149M9 1564 aa17.29■□□□□ 0.36
SH3RF1-205ENST00000511421 TMEM94Q12767 1356 aa17.28■□□□□ 0.36
SH3RF1-205ENST00000511421 NEXMIFQ5QGS0 1516 aa17.27■□□□□ 0.36
SH3RF1-205ENST00000511421 PROSER2Q86WR7 435 aaPredicted RBP17.27■□□□□ 0.36
SH3RF1-205ENST00000511421 NKTRP30414 1462 aaKnown RBP17.27■□□□□ 0.35
SH3RF1-205ENST00000511421 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
SH3RF1-205ENST00000511421 KIF1BO60333 1816 aa17.26■□□□□ 0.35
SH3RF1-205ENST00000511421 DIP2AQ14689 1571 aa17.26■□□□□ 0.35
SH3RF1-205ENST00000511421 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
SH3RF1-205ENST00000511421 XIRP1Q702N8 1843 aaKnown RBP17.26■□□□□ 0.35
SH3RF1-205ENST00000511421 RBM33Q96EV2 1170 aaKnown RBP17.25■□□□□ 0.35
SH3RF1-205ENST00000511421 CHD2O14647 1828 aaKnown RBP17.25■□□□□ 0.35
SH3RF1-205ENST00000511421 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
SH3RF1-205ENST00000511421 SETBP1Q9Y6X0 1596 aa17.24■□□□□ 0.35
SH3RF1-205ENST00000511421 CCDC144AA2RUR9 1427 aa17.24■□□□□ 0.35
SH3RF1-205ENST00000511421 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
SH3RF1-205ENST00000511421 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
SH3RF1-205ENST00000511421 HRCP23327 699 aa17.23■□□□□ 0.35
SH3RF1-205ENST00000511421 PTPRUQ92729 1446 aa17.22■□□□□ 0.35
SH3RF1-205ENST00000511421 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
SH3RF1-205ENST00000511421 SPATA31E1Q6ZUB1 1445 aa17.21■□□□□ 0.35
SH3RF1-205ENST00000511421 AMOTL2Q9Y2J4 779 aa17.2■□□□□ 0.34
SH3RF1-205ENST00000511421 METP08581 1390 aa17.2■□□□□ 0.34
SH3RF1-205ENST00000511421 HSPA1LP34931 641 aa17.2■□□□□ 0.34
SH3RF1-205ENST00000511421 NCOA3Q9Y6Q9 1424 aa17.18■□□□□ 0.34
SH3RF1-205ENST00000511421 RGL3Q3MIN7 710 aa17.17■□□□□ 0.34
SH3RF1-205ENST00000511421 MSH6P52701 1360 aa17.16■□□□□ 0.34
SH3RF1-205ENST00000511421 PPLO60437 1756 aa17.15■□□□□ 0.34
SH3RF1-205ENST00000511421 ANKRD30BQ9BXX2 1392 aa17.15■□□□□ 0.34
SH3RF1-205ENST00000511421 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
SH3RF1-205ENST00000511421 XRN1Q8IZH2 1706 aaKnown RBP17.14■□□□□ 0.33
SH3RF1-205ENST00000511421 FAM135BQ49AJ0 1406 aa17.14■□□□□ 0.33
SH3RF1-205ENST00000511421 C19orf44Q9H6X5 657 aa17.12■□□□□ 0.33
SH3RF1-205ENST00000511421 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
SH3RF1-205ENST00000511421 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
SH3RF1-205ENST00000511421 SLAIN2Q9P270 581 aa17.1■□□□□ 0.33
SH3RF1-205ENST00000511421 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
SH3RF1-205ENST00000511421 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
SH3RF1-205ENST00000511421 PIK3C2GO75747 1445 aa17.07■□□□□ 0.32
SH3RF1-205ENST00000511421 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
SH3RF1-205ENST00000511421 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
SH3RF1-205ENST00000511421 PTCH1Q13635 1447 aa17.06■□□□□ 0.32
SH3RF1-205ENST00000511421 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
SH3RF1-205ENST00000511421 ATF3P18847 181 aa17.06■□□□□ 0.32
SH3RF1-205ENST00000511421 ROBO1Q9Y6N7 1651 aa17.05■□□□□ 0.32
SH3RF1-205ENST00000511421 DCCP43146 1447 aa17.05■□□□□ 0.32
SH3RF1-205ENST00000511421 DISP3Q9P2K9 1392 aa17.05■□□□□ 0.32
SH3RF1-205ENST00000511421 NRXN1Q9ULB1 1477 aa17.04■□□□□ 0.32
SH3RF1-205ENST00000511421 MYOM2P54296 1465 aa17.04■□□□□ 0.32
SH3RF1-205ENST00000511421 ADGRL3Q9HAR2 1447 aa17.03■□□□□ 0.32
SH3RF1-205ENST00000511421 C14orf93Q9H972 538 aaKnown RBP17.03■□□□□ 0.32
SH3RF1-205ENST00000511421 ASXL1Q8IXJ9 1541 aa17.02■□□□□ 0.31
SH3RF1-205ENST00000511421 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
SH3RF1-205ENST00000511421 LRPPRCP42704 1394 aaKnown RBP17.01■□□□□ 0.31
SH3RF1-205ENST00000511421 MST1RQ04912 1400 aa17■□□□□ 0.31
SH3RF1-205ENST00000511421 CFAP70Q5T0N1 1121 aa17■□□□□ 0.31
SH3RF1-205ENST00000511421 ABCC11Q96J66 1382 aa17■□□□□ 0.31
SH3RF1-205ENST00000511421 TECPR2O15040 1411 aa16.99■□□□□ 0.31
SH3RF1-205ENST00000511421 STK26Q9P289 416 aa16.99■□□□□ 0.31
SH3RF1-205ENST00000511421 DHX57Q6P158 1386 aaKnown RBP16.98■□□□□ 0.31
SH3RF1-205ENST00000511421 BRINP3Q76B58 766 aa16.98■□□□□ 0.31
SH3RF1-205ENST00000511421 NALCNQ8IZF0 1738 aa16.98■□□□□ 0.31
SH3RF1-205ENST00000511421 DCAF11Q8TEB1 546 aa16.97■□□□□ 0.31
SH3RF1-205ENST00000511421 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
SH3RF1-205ENST00000511421 YTHDC2Q9H6S0 1430 aaKnown RBP16.97■□□□□ 0.31
SH3RF1-205ENST00000511421 WAPLQ7Z5K2 1190 aa16.96■□□□□ 0.31
SH3RF1-205ENST00000511421 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
SH3RF1-205ENST00000511421 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.31
SH3RF1-205ENST00000511421 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
SH3RF1-205ENST00000511421 PLEKHH1Q9ULM0 1364 aa16.94■□□□□ 0.3
SH3RF1-205ENST00000511421 AHDC1Q5TGY3 1603 aaPredicted RBP16.93■□□□□ 0.3
SH3RF1-205ENST00000511421 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
SH3RF1-205ENST00000511421 PHLPP1O60346 1717 aa16.93■□□□□ 0.3
SH3RF1-205ENST00000511421 ILDR2Q71H61 639 aa16.93■□□□□ 0.3
SH3RF1-205ENST00000511421 LAMC1P11047 1609 aa16.93■□□□□ 0.3
SH3RF1-205ENST00000511421 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
SH3RF1-205ENST00000511421 COL16A1Q07092 1604 aaPredicted RBP16.92■□□□□ 0.3
SH3RF1-205ENST00000511421 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
SH3RF1-205ENST00000511421 JCADQ9P266 1359 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms