RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 MAP3K13O43283 966 aa11.22□□□□□ -0.61
CLCN3-207ENST00000511092 ATMINO43313 823 aaPredicted RBP11.22□□□□□ -0.61
CLCN3-207ENST00000511092 PLCH2O75038 1416 aa11.22□□□□□ -0.61
CLCN3-207ENST00000511092 SPATA31A6Q5VVP1 1343 aa11.21□□□□□ -0.61
CLCN3-207ENST00000511092 RBM6P78332 1123 aaKnown RBP11.21□□□□□ -0.61
CLCN3-207ENST00000511092 DCAF8Q5TAQ9 597 aa11.2□□□□□ -0.62
CLCN3-207ENST00000511092 CTTNBP2Q8WZ74 1663 aa11.2□□□□□ -0.62
CLCN3-207ENST00000511092 PELP1Q8IZL8 1130 aaKnown RBP11.19□□□□□ -0.62
CLCN3-207ENST00000511092 MAP3K1Q13233 1512 aa11.19□□□□□ -0.62
CLCN3-207ENST00000511092 CHD4Q14839 1912 aa11.18□□□□□ -0.62
CLCN3-207ENST00000511092 TIE1P35590 1138 aa11.18□□□□□ -0.62
CLCN3-207ENST00000511092 SPOCK2Q92563 424 aa11.18□□□□□ -0.62
CLCN3-207ENST00000511092 QTRT2Q9H974 415 aaKnown RBP11.17□□□□□ -0.62
CLCN3-207ENST00000511092 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
CLCN3-207ENST00000511092 DIP2AQ14689 1571 aa11.16□□□□□ -0.62
CLCN3-207ENST00000511092 UTRNP46939 3433 aa11.15□□□□□ -0.62
CLCN3-207ENST00000511092 LRRC9Q6ZRR7 1453 aa11.15□□□□□ -0.62
CLCN3-207ENST00000511092 BMP2KQ9NSY1 1161 aaPredicted RBP11.15□□□□□ -0.62
CLCN3-207ENST00000511092 FGD6Q6ZV73 1430 aa11.15□□□□□ -0.62
CLCN3-207ENST00000511092 ZNF518AQ6AHZ1 1483 aa11.14□□□□□ -0.63
CLCN3-207ENST00000511092 C7P10643 843 aa11.14□□□□□ -0.63
CLCN3-207ENST00000511092 PCDHB13Q9Y5F0 798 aa11.14□□□□□ -0.63
CLCN3-207ENST00000511092 KIDINS220Q9ULH0 1771 aa11.13□□□□□ -0.63
CLCN3-207ENST00000511092 TRPC6Q9Y210 931 aa11.13□□□□□ -0.63
CLCN3-207ENST00000511092 SCAF11Q99590 1463 aaKnown RBP11.12□□□□□ -0.63
CLCN3-207ENST00000511092 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
CLCN3-207ENST00000511092 ATN1P54259 1190 aaPredicted RBP11.12□□□□□ -0.63
CLCN3-207ENST00000511092 GSE1Q14687 1217 aa11.12□□□□□ -0.63
CLCN3-207ENST00000511092 ANKLE2Q86XL3 938 aa11.12□□□□□ -0.63
CLCN3-207ENST00000511092 CCDC125Q86Z20 511 aa11.12□□□□□ -0.63
CLCN3-207ENST00000511092 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
CLCN3-207ENST00000511092 KIF14Q15058 1648 aa11.12□□□□□ -0.63
CLCN3-207ENST00000511092 MYO5CQ9NQX4 1742 aa11.12□□□□□ -0.63
CLCN3-207ENST00000511092 BRWD3Q6RI45 1802 aa11.12□□□□□ -0.63
CLCN3-207ENST00000511092 BLMP54132 1417 aaPredicted RBP11.11□□□□□ -0.63
CLCN3-207ENST00000511092 AFAP1Q8N556 730 aa11.11□□□□□ -0.63
CLCN3-207ENST00000511092 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
CLCN3-207ENST00000511092 KDM5DQ9BY66 1539 aa11.1□□□□□ -0.63
CLCN3-207ENST00000511092 PRELPP51888 382 aa11.1□□□□□ -0.63
CLCN3-207ENST00000511092 GOLGA3Q08378 1498 aa11.1□□□□□ -0.63
CLCN3-207ENST00000511092 RTEL1-TNFRSF6BF6WH68 1400 aa11.09□□□□□ -0.63
CLCN3-207ENST00000511092 TTLL13PA6NNM8 815 aa11.09□□□□□ -0.63
CLCN3-207ENST00000511092 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
CLCN3-207ENST00000511092 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
CLCN3-207ENST00000511092 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
CLCN3-207ENST00000511092 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
CLCN3-207ENST00000511092 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
CLCN3-207ENST00000511092 POTEB2H3BUK9 544 aa11.07□□□□□ -0.64
CLCN3-207ENST00000511092 PYGBP11216 843 aa11.07□□□□□ -0.64
CLCN3-207ENST00000511092 C8orf37Q96NL8 207 aa11.07□□□□□ -0.64
CLCN3-207ENST00000511092 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
CLCN3-207ENST00000511092 ATP7AQ04656 1500 aa11.06□□□□□ -0.64
CLCN3-207ENST00000511092 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
CLCN3-207ENST00000511092 MLH3Q9UHC1 1453 aa11.06□□□□□ -0.64
CLCN3-207ENST00000511092 R3HDM1Q15032 1099 aaKnown RBP11.05□□□□□ -0.64
CLCN3-207ENST00000511092 UGGT1Q9NYU2 1555 aa11.05□□□□□ -0.64
CLCN3-207ENST00000511092 GIGYF1O75420 1035 aaPredicted RBP11.04□□□□□ -0.64
CLCN3-207ENST00000511092 KDM5AP29375 1690 aaKnown RBP11.04□□□□□ -0.64
CLCN3-207ENST00000511092 NGLY1Q96IV0 654 aa11.03□□□□□ -0.64
CLCN3-207ENST00000511092 IER5LQ5T953 404 aa11.02□□□□□ -0.65
CLCN3-207ENST00000511092 TNRQ92752 1358 aa11.02□□□□□ -0.65
CLCN3-207ENST00000511092 CHRM1P11229 460 aaPredicted RBP11.01□□□□□ -0.65
CLCN3-207ENST00000511092 OTUD5Q96G74 571 aa11.01□□□□□ -0.65
CLCN3-207ENST00000511092 FAM135AQ9P2D6 1515 aa11□□□□□ -0.65
CLCN3-207ENST00000511092 UNC13BO14795 1591 aa11□□□□□ -0.65
CLCN3-207ENST00000511092 TRIM35Q9UPQ4 493 aa11□□□□□ -0.65
CLCN3-207ENST00000511092 FBXO31Q5XUX0 539 aaPredicted RBP10.99□□□□□ -0.65
CLCN3-207ENST00000511092 MAST1Q9Y2H9 1570 aa10.99□□□□□ -0.65
CLCN3-207ENST00000511092 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
CLCN3-207ENST00000511092 P3H3Q8IVL6 736 aa10.98□□□□□ -0.65
CLCN3-207ENST00000511092 TMEM106CQ9BVX2 250 aa10.98□□□□□ -0.65
CLCN3-207ENST00000511092 SLAIN2Q9P270 581 aa10.98□□□□□ -0.65
CLCN3-207ENST00000511092 ATRNO75882 1429 aa10.97□□□□□ -0.65
CLCN3-207ENST00000511092 PLXNC1O60486 1568 aa10.97□□□□□ -0.65
CLCN3-207ENST00000511092 SHANK3Q9BYB0 1731 aa10.97□□□□□ -0.65
CLCN3-207ENST00000511092 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
CLCN3-207ENST00000511092 TNS4Q8IZW8 715 aa10.96□□□□□ -0.65
CLCN3-207ENST00000511092 POTEJP0CG39 1038 aa10.95□□□□□ -0.66
CLCN3-207ENST00000511092 MAMSTRQ6ZN01 415 aa10.95□□□□□ -0.66
CLCN3-207ENST00000511092 SPHKAPQ2M3C7 1700 aa10.95□□□□□ -0.66
CLCN3-207ENST00000511092 NINLQ9Y2I6 1382 aa10.94□□□□□ -0.66
CLCN3-207ENST00000511092 THEMISQ8N1K5 641 aaPredicted RBP10.94□□□□□ -0.66
CLCN3-207ENST00000511092 PRDM15P57071 1507 aaPredicted RBP10.94□□□□□ -0.66
CLCN3-207ENST00000511092 ARHGAP5Q13017 1502 aa10.94□□□□□ -0.66
CLCN3-207ENST00000511092 CDC42BPBQ9Y5S2 1711 aa10.93□□□□□ -0.66
CLCN3-207ENST00000511092 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
CLCN3-207ENST00000511092 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
CLCN3-207ENST00000511092 PLEKHD1A6NEE1 506 aa10.92□□□□□ -0.66
CLCN3-207ENST00000511092 MSH6P52701 1360 aa10.91□□□□□ -0.66
CLCN3-207ENST00000511092 SF3B2Q13435 895 aaKnown RBP10.91□□□□□ -0.66
CLCN3-207ENST00000511092 EFCAB2Q5VUJ9 269 aa10.91□□□□□ -0.66
CLCN3-207ENST00000511092 COLQQ9Y215 455 aaPredicted RBP10.91□□□□□ -0.66
CLCN3-207ENST00000511092 NLRP1Q9C000 1473 aa10.91□□□□□ -0.66
CLCN3-207ENST00000511092 ADAMTS2O95450 1211 aa10.9□□□□□ -0.66
CLCN3-207ENST00000511092 SEC24BO95487 1268 aa10.9□□□□□ -0.66
CLCN3-207ENST00000511092 USP21Q9UK80 565 aa10.9□□□□□ -0.66
CLCN3-207ENST00000511092 GLI3P10071 1580 aa10.9□□□□□ -0.67
CLCN3-207ENST00000511092 PZPP20742 1482 aa10.89□□□□□ -0.67
CLCN3-207ENST00000511092 TRPC5Q9UL62 973 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-207ENST00000511092 GGT6Q6P531 493 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms