RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 RIMS2Q9UQ26 1411 aa24.23■■□□□ 1.47
SKP2-205ENST00000509692 TRPM2O94759 1503 aa24.23■■□□□ 1.47
SKP2-205ENST00000509692 STRCP1A6NGW2 1772 aa24.22■■□□□ 1.47
SKP2-205ENST00000509692 CLTCL1P53675 1640 aa24.21■■□□□ 1.47
SKP2-205ENST00000509692 IQSEC2Q5JU85 1478 aa24.21■■□□□ 1.47
SKP2-205ENST00000509692 MPHOSPH9Q99550 1183 aa24.21■■□□□ 1.47
SKP2-205ENST00000509692 FOXD1Q16676 465 aa24.2■■□□□ 1.46
SKP2-205ENST00000509692 CPS1P31327 1500 aa24.19■■□□□ 1.46
SKP2-205ENST00000509692 NUTM2DQ5VT03 806 aaPredicted RBP24.18■■□□□ 1.46
SKP2-205ENST00000509692 SENP3Q9H4L4 574 aaPredicted RBP24.18■■□□□ 1.46
SKP2-205ENST00000509692 SLC26A8Q96RN1 970 aa24.17■■□□□ 1.46
SKP2-205ENST00000509692 HDGFP51858 240 aaKnown RBP24.17■■□□□ 1.46
SKP2-205ENST00000509692 PPP1R15AO75807 674 aaPredicted RBP24.15■■□□□ 1.46
SKP2-205ENST00000509692 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
SKP2-205ENST00000509692 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.14■■□□□ 1.46
SKP2-205ENST00000509692 KIF1BO60333 1816 aa24.14■■□□□ 1.45
SKP2-205ENST00000509692 BCANQ96GW7 911 aa24.13■■□□□ 1.45
SKP2-205ENST00000509692 ZNF326Q5BKZ1 582 aaKnown RBP24.1■■□□□ 1.45
SKP2-205ENST00000509692 LRRC7Q96NW7 1537 aa24.1■■□□□ 1.45
SKP2-205ENST00000509692 ADAMTS13Q76LX8 1427 aa24.07■■□□□ 1.44
SKP2-205ENST00000509692 UBAP1LF5GYI3 381 aa24.06■■□□□ 1.44
SKP2-205ENST00000509692 KCNA6P17658 529 aa24.06■■□□□ 1.44
SKP2-205ENST00000509692 NEXMIFQ5QGS0 1516 aa24.06■■□□□ 1.44
SKP2-205ENST00000509692 TBX22Q9Y458 520 aa24.05■■□□□ 1.44
SKP2-205ENST00000509692 CCDC144AA2RUR9 1427 aa24.03■■□□□ 1.44
SKP2-205ENST00000509692 CHD2O14647 1828 aaKnown RBP24.03■■□□□ 1.44
SKP2-205ENST00000509692 XIRP1Q702N8 1843 aaKnown RBP24.03■■□□□ 1.44
SKP2-205ENST00000509692 DHX57Q6P158 1386 aaKnown RBP24.02■■□□□ 1.44
SKP2-205ENST00000509692 NWD1Q149M9 1564 aa24.02■■□□□ 1.44
SKP2-205ENST00000509692 NRXN3Q9Y4C0 1643 aa24.02■■□□□ 1.44
SKP2-205ENST00000509692 DIP2AQ14689 1571 aa23.99■■□□□ 1.43
SKP2-205ENST00000509692 SETBP1Q9Y6X0 1596 aa23.99■■□□□ 1.43
SKP2-205ENST00000509692 ALKQ9UM73 1620 aa23.98■■□□□ 1.43
SKP2-205ENST00000509692 RBM33Q96EV2 1170 aaKnown RBP23.97■■□□□ 1.43
SKP2-205ENST00000509692 SPATA31E1Q6ZUB1 1445 aa23.97■■□□□ 1.43
SKP2-205ENST00000509692 TMEM94Q12767 1356 aa23.97■■□□□ 1.43
SKP2-205ENST00000509692 ANKRD30BQ9BXX2 1392 aa23.97■■□□□ 1.43
SKP2-205ENST00000509692 PPLO60437 1756 aa23.96■■□□□ 1.43
SKP2-205ENST00000509692 RPGRIP1LQ68CZ1 1315 aa23.96■■□□□ 1.43
SKP2-205ENST00000509692 NKTRP30414 1462 aaKnown RBP23.96■■□□□ 1.43
SKP2-205ENST00000509692 TOM1O60784 492 aa23.95■■□□□ 1.43
SKP2-205ENST00000509692 PROSER2Q86WR7 435 aaPredicted RBP23.95■■□□□ 1.43
SKP2-205ENST00000509692 RGL3Q3MIN7 710 aa23.95■■□□□ 1.42
SKP2-205ENST00000509692 VGFO15240 615 aaPredicted RBP23.94■■□□□ 1.42
SKP2-205ENST00000509692 PIK3R4Q99570 1358 aa23.94■■□□□ 1.42
SKP2-205ENST00000509692 PTPRUQ92729 1446 aa23.93■■□□□ 1.42
SKP2-205ENST00000509692 PIP4K2BP78356 416 aa23.92■■□□□ 1.42
SKP2-205ENST00000509692 METP08581 1390 aa23.91■■□□□ 1.42
SKP2-205ENST00000509692 AMOTL2Q9Y2J4 779 aa23.9■■□□□ 1.42
SKP2-205ENST00000509692 SCAF1Q9H7N4 1312 aaKnown RBP23.89■■□□□ 1.41
SKP2-205ENST00000509692 IFT172Q9UG01 1749 aa23.89■■□□□ 1.41
SKP2-205ENST00000509692 ADGRF5Q8IZF2 1346 aa23.87■■□□□ 1.41
SKP2-205ENST00000509692 SETD1AO15047 1707 aaKnown RBP23.86■■□□□ 1.41
SKP2-205ENST00000509692 XRN1Q8IZH2 1706 aaKnown RBP23.85■■□□□ 1.41
SKP2-205ENST00000509692 NCOA3Q9Y6Q9 1424 aa23.8■■□□□ 1.4
SKP2-205ENST00000509692 MSH6P52701 1360 aa23.8■■□□□ 1.4
SKP2-205ENST00000509692 CCER1Q8TC90 406 aaPredicted RBP23.8■■□□□ 1.4
SKP2-205ENST00000509692 HSPA1LP34931 641 aa23.79■■□□□ 1.4
SKP2-205ENST00000509692 SIN3AQ96ST3 1273 aa23.79■■□□□ 1.4
SKP2-205ENST00000509692 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
SKP2-205ENST00000509692 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
SKP2-205ENST00000509692 NEUROD1Q13562 356 aa23.75■■□□□ 1.39
SKP2-205ENST00000509692 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.75■■□□□ 1.39
SKP2-205ENST00000509692 CLSPNQ9HAW4 1339 aa23.75■■□□□ 1.39
SKP2-205ENST00000509692 C19orf44Q9H6X5 657 aa23.74■■□□□ 1.39
SKP2-205ENST00000509692 MYOM2P54296 1465 aa23.73■■□□□ 1.39
SKP2-205ENST00000509692 NRXN1Q9ULB1 1477 aa23.73■■□□□ 1.39
SKP2-205ENST00000509692 SLAIN2Q9P270 581 aa23.72■■□□□ 1.39
SKP2-205ENST00000509692 ROBO2Q9HCK4 1378 aa23.72■■□□□ 1.39
SKP2-205ENST00000509692 FAM135BQ49AJ0 1406 aa23.71■■□□□ 1.39
SKP2-205ENST00000509692 ASXL1Q8IXJ9 1541 aa23.7■■□□□ 1.38
SKP2-205ENST00000509692 PTCH1Q13635 1447 aa23.7■■□□□ 1.38
SKP2-205ENST00000509692 ROBO1Q9Y6N7 1651 aa23.7■■□□□ 1.38
SKP2-205ENST00000509692 TMEM132EQ6IEE7 984 aa23.7■■□□□ 1.38
SKP2-205ENST00000509692 PRAG1Q86YV5 1406 aa23.69■■□□□ 1.38
SKP2-205ENST00000509692 C14orf93Q9H972 538 aaKnown RBP23.69■■□□□ 1.38
SKP2-205ENST00000509692 ATF3P18847 181 aa23.67■■□□□ 1.38
SKP2-205ENST00000509692 CFAP70Q5T0N1 1121 aa23.67■■□□□ 1.38
SKP2-205ENST00000509692 CADPS2Q86UW7 1296 aa23.67■■□□□ 1.38
SKP2-205ENST00000509692 DCAF11Q8TEB1 546 aa23.67■■□□□ 1.38
SKP2-205ENST00000509692 NALCNQ8IZF0 1738 aa23.67■■□□□ 1.38
SKP2-205ENST00000509692 KDM2AQ9Y2K7 1162 aa23.66■■□□□ 1.38
SKP2-205ENST00000509692 STK26Q9P289 416 aa23.66■■□□□ 1.38
SKP2-205ENST00000509692 ADGRL3Q9HAR2 1447 aa23.65■■□□□ 1.38
SKP2-205ENST00000509692 DCCP43146 1447 aa23.64■■□□□ 1.38
SKP2-205ENST00000509692 LRPPRCP42704 1394 aaKnown RBP23.64■■□□□ 1.37
SKP2-205ENST00000509692 LAMC1P11047 1609 aa23.63■■□□□ 1.37
SKP2-205ENST00000509692 TECPR2O15040 1411 aa23.62■■□□□ 1.37
SKP2-205ENST00000509692 ABCC11Q96J66 1382 aa23.62■■□□□ 1.37
SKP2-205ENST00000509692 YTHDC2Q9H6S0 1430 aaKnown RBP23.62■■□□□ 1.37
SKP2-205ENST00000509692 L3MBTL2Q969R5 705 aa23.61■■□□□ 1.37
SKP2-205ENST00000509692 TONSLQ96HA7 1378 aa23.61■■□□□ 1.37
SKP2-205ENST00000509692 KNDC1Q76NI1 1749 aa23.6■■□□□ 1.37
SKP2-205ENST00000509692 WAPLQ7Z5K2 1190 aa23.59■■□□□ 1.37
SKP2-205ENST00000509692 STAC3Q96MF2 364 aa23.59■■□□□ 1.37
SKP2-205ENST00000509692 MST1RQ04912 1400 aa23.59■■□□□ 1.37
SKP2-205ENST00000509692 PLEKHH1Q9ULM0 1364 aa23.57■■□□□ 1.36
SKP2-205ENST00000509692 ADGRB1O14514 1584 aa23.56■■□□□ 1.36
SKP2-205ENST00000509692 BRINP3Q76B58 766 aa23.55■■□□□ 1.36
SKP2-205ENST00000509692 PHLPP1O60346 1717 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms