RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 PPP1R15AO75807 674 aaPredicted RBP29.06■■■□□ 2.24
FGFR4-211ENST00000509511 HDGFP51858 240 aaKnown RBP29.06■■■□□ 2.24
FGFR4-211ENST00000509511 LTBP4Q8N2S1 1624 aa29.05■■■□□ 2.24
FGFR4-211ENST00000509511 TRIM26Q12899 539 aaPredicted RBP29.04■■■□□ 2.24
FGFR4-211ENST00000509511 ZNF335Q9H4Z2 1342 aaPredicted RBP29.04■■■□□ 2.24
FGFR4-211ENST00000509511 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.03■■■□□ 2.24
FGFR4-211ENST00000509511 PLEKHG1Q9ULL1 1385 aa29.02■■■□□ 2.24
FGFR4-211ENST00000509511 ZNF326Q5BKZ1 582 aaKnown RBP29.01■■■□□ 2.23
FGFR4-211ENST00000509511 NEXMIFQ5QGS0 1516 aa28.99■■■□□ 2.23
FGFR4-211ENST00000509511 CPS1P31327 1500 aa28.98■■■□□ 2.23
FGFR4-211ENST00000509511 DIP2AQ14689 1571 aa28.95■■■□□ 2.23
FGFR4-211ENST00000509511 BCANQ96GW7 911 aa28.95■■■□□ 2.23
FGFR4-211ENST00000509511 CERKQ8TCT0 537 aa28.94■■■□□ 2.22
FGFR4-211ENST00000509511 NUTM2DQ5VT03 806 aaPredicted RBP28.93■■■□□ 2.22
FGFR4-211ENST00000509511 IQSEC2Q5JU85 1478 aa28.92■■■□□ 2.22
FGFR4-211ENST00000509511 SPATA31E1Q6ZUB1 1445 aa28.92■■■□□ 2.22
FGFR4-211ENST00000509511 SETBP1Q9Y6X0 1596 aa28.91■■■□□ 2.22
FGFR4-211ENST00000509511 ANKRD30BQ9BXX2 1392 aa28.9■■■□□ 2.22
FGFR4-211ENST00000509511 PPLO60437 1756 aa28.9■■■□□ 2.22
FGFR4-211ENST00000509511 SLC26A8Q96RN1 970 aa28.89■■■□□ 2.21
FGFR4-211ENST00000509511 RPGRIP1LQ68CZ1 1315 aa28.88■■■□□ 2.21
FGFR4-211ENST00000509511 STRCP1A6NGW2 1772 aa28.88■■■□□ 2.21
FGFR4-211ENST00000509511 NWD1Q149M9 1564 aa28.87■■■□□ 2.21
FGFR4-211ENST00000509511 ADAMTS13Q76LX8 1427 aa28.87■■■□□ 2.21
FGFR4-211ENST00000509511 NRXN3Q9Y4C0 1643 aa28.86■■■□□ 2.21
FGFR4-211ENST00000509511 SENP3Q9H4L4 574 aaPredicted RBP28.86■■■□□ 2.21
FGFR4-211ENST00000509511 IFT172Q9UG01 1749 aa28.85■■■□□ 2.21
FGFR4-211ENST00000509511 NKTRP30414 1462 aaKnown RBP28.82■■■□□ 2.2
FGFR4-211ENST00000509511 VGFO15240 615 aaPredicted RBP28.81■■■□□ 2.2
FGFR4-211ENST00000509511 TBX22Q9Y458 520 aa28.8■■■□□ 2.2
FGFR4-211ENST00000509511 RGL3Q3MIN7 710 aa28.79■■■□□ 2.2
FGFR4-211ENST00000509511 LRRC7Q96NW7 1537 aa28.79■■■□□ 2.2
FGFR4-211ENST00000509511 PIK3R4Q99570 1358 aa28.79■■■□□ 2.2
FGFR4-211ENST00000509511 KCNA6P17658 529 aa28.76■■■□□ 2.19
FGFR4-211ENST00000509511 FBXO41Q8TF61 875 aa28.76■■■□□ 2.19
FGFR4-211ENST00000509511 CHD2O14647 1828 aaKnown RBP28.76■■■□□ 2.19
FGFR4-211ENST00000509511 MYOM2P54296 1465 aa28.74■■■□□ 2.19
FGFR4-211ENST00000509511 ILDR1Q86SU0 546 aaPredicted RBP28.72■■■□□ 2.19
FGFR4-211ENST00000509511 SETD1AO15047 1707 aaKnown RBP28.72■■■□□ 2.19
FGFR4-211ENST00000509511 XRN1Q8IZH2 1706 aaKnown RBP28.71■■■□□ 2.19
FGFR4-211ENST00000509511 DHX57Q6P158 1386 aaKnown RBP28.7■■■□□ 2.19
FGFR4-211ENST00000509511 ALKQ9UM73 1620 aa28.7■■■□□ 2.18
FGFR4-211ENST00000509511 PIK3C2GO75747 1445 aa28.69■■■□□ 2.18
FGFR4-211ENST00000509511 METP08581 1390 aa28.67■■■□□ 2.18
FGFR4-211ENST00000509511 ADGRF5Q8IZF2 1346 aa28.67■■■□□ 2.18
FGFR4-211ENST00000509511 TMEM94Q12767 1356 aa28.66■■■□□ 2.18
FGFR4-211ENST00000509511 XIRP1Q702N8 1843 aaKnown RBP28.66■■■□□ 2.18
FGFR4-211ENST00000509511 NRXN1Q9ULB1 1477 aa28.66■■■□□ 2.18
FGFR4-211ENST00000509511 LAMC1P11047 1609 aa28.65■■■□□ 2.18
FGFR4-211ENST00000509511 PTPRUQ92729 1446 aa28.64■■■□□ 2.18
FGFR4-211ENST00000509511 PROSER2Q86WR7 435 aaPredicted RBP28.63■■■□□ 2.17
FGFR4-211ENST00000509511 UBAP1LF5GYI3 381 aa28.61■■■□□ 2.17
FGFR4-211ENST00000509511 AMOTL2Q9Y2J4 779 aa28.6■■■□□ 2.17
FGFR4-211ENST00000509511 PCGF6Q9BYE7 350 aa28.59■■■□□ 2.17
FGFR4-211ENST00000509511 PTCH1Q13635 1447 aa28.58■■■□□ 2.17
FGFR4-211ENST00000509511 PRAG1Q86YV5 1406 aa28.58■■■□□ 2.17
FGFR4-211ENST00000509511 ASXL1Q8IXJ9 1541 aa28.56■■■□□ 2.16
FGFR4-211ENST00000509511 NCOA3Q9Y6Q9 1424 aa28.56■■■□□ 2.16
FGFR4-211ENST00000509511 TOM1O60784 492 aa28.55■■■□□ 2.16
FGFR4-211ENST00000509511 DCAF11Q8TEB1 546 aa28.55■■■□□ 2.16
FGFR4-211ENST00000509511 STAC3Q96MF2 364 aa28.55■■■□□ 2.16
FGFR4-211ENST00000509511 MSH6P52701 1360 aa28.54■■■□□ 2.16
FGFR4-211ENST00000509511 RBM33Q96EV2 1170 aaKnown RBP28.53■■■□□ 2.16
FGFR4-211ENST00000509511 C14orf37Q86TY3 774 aa28.51■■■□□ 2.15
FGFR4-211ENST00000509511 KNDC1Q76NI1 1749 aa28.51■■■□□ 2.15
FGFR4-211ENST00000509511 KDM2AQ9Y2K7 1162 aa28.49■■■□□ 2.15
FGFR4-211ENST00000509511 C14orf93Q9H972 538 aaKnown RBP28.48■■■□□ 2.15
FGFR4-211ENST00000509511 TECPR2O15040 1411 aa28.48■■■□□ 2.15
FGFR4-211ENST00000509511 LRPPRCP42704 1394 aaKnown RBP28.47■■■□□ 2.15
FGFR4-211ENST00000509511 SIN3AQ96ST3 1273 aa28.46■■■□□ 2.15
FGFR4-211ENST00000509511 SCAF1Q9H7N4 1312 aaKnown RBP28.46■■■□□ 2.15
FGFR4-211ENST00000509511 YTHDC2Q9H6S0 1430 aaKnown RBP28.46■■■□□ 2.15
FGFR4-211ENST00000509511 ROBO2Q9HCK4 1378 aa28.45■■■□□ 2.15
FGFR4-211ENST00000509511 NALCNQ8IZF0 1738 aa28.45■■■□□ 2.14
FGFR4-211ENST00000509511 DCCP43146 1447 aa28.45■■■□□ 2.14
FGFR4-211ENST00000509511 ADGRL3Q9HAR2 1447 aa28.45■■■□□ 2.14
FGFR4-211ENST00000509511 CFAP70Q5T0N1 1121 aa28.44■■■□□ 2.14
FGFR4-211ENST00000509511 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.44■■■□□ 2.14
FGFR4-211ENST00000509511 PIP4K2BP78356 416 aa28.43■■■□□ 2.14
FGFR4-211ENST00000509511 NEUROD1Q13562 356 aa28.43■■■□□ 2.14
FGFR4-211ENST00000509511 ADGRB1O14514 1584 aa28.43■■■□□ 2.14
FGFR4-211ENST00000509511 TMEM132EQ6IEE7 984 aa28.42■■■□□ 2.14
FGFR4-211ENST00000509511 ABCC11Q96J66 1382 aa28.41■■■□□ 2.14
FGFR4-211ENST00000509511 KIAA1210Q9ULL0 1709 aa28.41■■■□□ 2.14
FGFR4-211ENST00000509511 C19orf44Q9H6X5 657 aa28.4■■■□□ 2.14
FGFR4-211ENST00000509511 STK26Q9P289 416 aa28.39■■■□□ 2.13
FGFR4-211ENST00000509511 ATF3P18847 181 aa28.37■■■□□ 2.13
FGFR4-211ENST00000509511 CADPS2Q86UW7 1296 aa28.37■■■□□ 2.13
FGFR4-211ENST00000509511 L3MBTL2Q969R5 705 aa28.37■■■□□ 2.13
FGFR4-211ENST00000509511 TONSLQ96HA7 1378 aa28.36■■■□□ 2.13
FGFR4-211ENST00000509511 FAM135BQ49AJ0 1406 aa28.35■■■□□ 2.13
FGFR4-211ENST00000509511 DLC1Q96QB1 1528 aa28.35■■■□□ 2.13
FGFR4-211ENST00000509511 ROBO1Q9Y6N7 1651 aa28.34■■■□□ 2.13
FGFR4-211ENST00000509511 CDC42BPGQ6DT37 1551 aa28.32■■■□□ 2.12
FGFR4-211ENST00000509511 SLAIN2Q9P270 581 aa28.29■■■□□ 2.12
FGFR4-211ENST00000509511 CLSPNQ9HAW4 1339 aa28.28■■■□□ 2.12
FGFR4-211ENST00000509511 PLEKHH1Q9ULM0 1364 aa28.28■■■□□ 2.12
FGFR4-211ENST00000509511 MST1RQ04912 1400 aa28.27■■■□□ 2.12
FGFR4-211ENST00000509511 TRPM1Q7Z4N2 1603 aa28.27■■■□□ 2.12
FGFR4-211ENST00000509511 SIRT1Q96EB6 747 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms