RNA–Protein interactions for RNA: ENST00000509208.1

COPG1-204, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 472 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-204ENST00000509208 PPLO60437 1756 aa15.38■□□□□ 0.05
COPG1-204ENST00000509208 NPHP4O75161 1426 aaPredicted RBP15.36■□□□□ 0.05
COPG1-204ENST00000509208 CHGAP10645 457 aaKnown RBP15.36■□□□□ 0.05
COPG1-204ENST00000509208 LTKP29376 864 aa15.36■□□□□ 0.05
COPG1-204ENST00000509208 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
COPG1-204ENST00000509208 NRXN3Q9Y4C0 1643 aa15.34■□□□□ 0.05
COPG1-204ENST00000509208 TXNDC2Q86VQ3 553 aa15.32■□□□□ 0.04
COPG1-204ENST00000509208 EID1Q9Y6B2 187 aa15.31■□□□□ 0.04
COPG1-204ENST00000509208 PLEKHG1Q9ULL1 1385 aa15.31■□□□□ 0.04
COPG1-204ENST00000509208 SETBP1Q9Y6X0 1596 aa15.31■□□□□ 0.04
COPG1-204ENST00000509208 SETD1AO15047 1707 aaKnown RBP15.29■□□□□ 0.04
COPG1-204ENST00000509208 ZNF326Q5BKZ1 582 aaKnown RBP15.29■□□□□ 0.04
COPG1-204ENST00000509208 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
COPG1-204ENST00000509208 STRCP1A6NGW2 1772 aa15.29■□□□□ 0.04
COPG1-204ENST00000509208 DIP2AQ14689 1571 aa15.28■□□□□ 0.04
COPG1-204ENST00000509208 NUTM2DQ5VT03 806 aaPredicted RBP15.28■□□□□ 0.04
COPG1-204ENST00000509208 ADAMTS13Q76LX8 1427 aa15.27■□□□□ 0.04
COPG1-204ENST00000509208 PPP1R15AO75807 674 aaPredicted RBP15.27■□□□□ 0.04
COPG1-204ENST00000509208 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.27■□□□□ 0.04
COPG1-204ENST00000509208 LTBP4Q8N2S1 1624 aa15.27■□□□□ 0.03
COPG1-204ENST00000509208 MYOM2P54296 1465 aa15.27■□□□□ 0.03
COPG1-204ENST00000509208 RPGRIP1LQ68CZ1 1315 aa15.25■□□□□ 0.03
COPG1-204ENST00000509208 NWD1Q149M9 1564 aa15.25■□□□□ 0.03
COPG1-204ENST00000509208 RGL3Q3MIN7 710 aa15.25■□□□□ 0.03
COPG1-204ENST00000509208 NRXN1Q9ULB1 1477 aa15.25■□□□□ 0.03
COPG1-204ENST00000509208 ZNF335Q9H4Z2 1342 aaPredicted RBP15.23■□□□□ 0.03
COPG1-204ENST00000509208 HDGFP51858 240 aaKnown RBP15.23■□□□□ 0.03
COPG1-204ENST00000509208 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
COPG1-204ENST00000509208 PIK3C2GO75747 1445 aa15.23■□□□□ 0.03
COPG1-204ENST00000509208 CHD2O14647 1828 aaKnown RBP15.22■□□□□ 0.03
COPG1-204ENST00000509208 ALKQ9UM73 1620 aa15.21■□□□□ 0.03
COPG1-204ENST00000509208 XRN1Q8IZH2 1706 aaKnown RBP15.21■□□□□ 0.03
COPG1-204ENST00000509208 SLC26A8Q96RN1 970 aa15.21■□□□□ 0.03
COPG1-204ENST00000509208 ASXL1Q8IXJ9 1541 aa15.21■□□□□ 0.03
COPG1-204ENST00000509208 LAMC1P11047 1609 aa15.21■□□□□ 0.02
COPG1-204ENST00000509208 ADGRF5Q8IZF2 1346 aa15.2■□□□□ 0.02
COPG1-204ENST00000509208 SIN3AQ96ST3 1273 aa15.2■□□□□ 0.02
COPG1-204ENST00000509208 CPS1P31327 1500 aa15.19■□□□□ 0.02
COPG1-204ENST00000509208 VGFO15240 615 aaPredicted RBP15.19■□□□□ 0.02
COPG1-204ENST00000509208 XIRP1Q702N8 1843 aaKnown RBP15.18■□□□□ 0.02
COPG1-204ENST00000509208 NKTRP30414 1462 aaKnown RBP15.18■□□□□ 0.02
COPG1-204ENST00000509208 METP08581 1390 aa15.17■□□□□ 0.02
COPG1-204ENST00000509208 BCANQ96GW7 911 aa15.17■□□□□ 0.02
COPG1-204ENST00000509208 TBX22Q9Y458 520 aa15.17■□□□□ 0.02
COPG1-204ENST00000509208 PTPRUQ92729 1446 aa15.17■□□□□ 0.02
COPG1-204ENST00000509208 PIK3R4Q99570 1358 aa15.15■□□□□ 0.02
COPG1-204ENST00000509208 LRRC7Q96NW7 1537 aa15.14■□□□□ 0.01
COPG1-204ENST00000509208 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
COPG1-204ENST00000509208 PRAG1Q86YV5 1406 aa15.14■□□□□ 0.01
COPG1-204ENST00000509208 KNDC1Q76NI1 1749 aa15.14■□□□□ 0.01
COPG1-204ENST00000509208 ADGRB1O14514 1584 aa15.13■□□□□ 0.01
COPG1-204ENST00000509208 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
COPG1-204ENST00000509208 KIAA1210Q9ULL0 1709 aa15.13■□□□□ 0.01
COPG1-204ENST00000509208 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
COPG1-204ENST00000509208 KCNA6P17658 529 aa15.12■□□□□ 0.01
COPG1-204ENST00000509208 L3MBTL2Q969R5 705 aa15.12■□□□□ 0.01
COPG1-204ENST00000509208 KDM2AQ9Y2K7 1162 aa15.11■□□□□ 0.01
COPG1-204ENST00000509208 IQSEC2Q5JU85 1478 aa15.11■□□□□ 0.01
COPG1-204ENST00000509208 PTCH1Q13635 1447 aa15.1■□□□□ 0.01
COPG1-204ENST00000509208 TRPM1Q7Z4N2 1603 aa15.1■□□□□ 0.01
COPG1-204ENST00000509208 STAC3Q96MF2 364 aa15.09■□□□□ 0.01
COPG1-204ENST00000509208 C14orf93Q9H972 538 aaKnown RBP15.09■□□□□ 0.01
COPG1-204ENST00000509208 TONSLQ96HA7 1378 aa15.09■□□□□ 0.01
COPG1-204ENST00000509208 TECPR2O15040 1411 aa15.09■□□□□ 0.01
COPG1-204ENST00000509208 CFAP70Q5T0N1 1121 aa15.08■□□□□ 0
COPG1-204ENST00000509208 CERKQ8TCT0 537 aa15.08■□□□□ 0
COPG1-204ENST00000509208 NALCNQ8IZF0 1738 aa15.07■□□□□ 0
COPG1-204ENST00000509208 CCER1Q8TC90 406 aaPredicted RBP15.07■□□□□ 0
COPG1-204ENST00000509208 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
COPG1-204ENST00000509208 TMEM94Q12767 1356 aa15.07■□□□□ 0
COPG1-204ENST00000509208 YTHDC2Q9H6S0 1430 aaKnown RBP15.07■□□□□ 0
COPG1-204ENST00000509208 AMOTL2Q9Y2J4 779 aa15.06■□□□□ 0
COPG1-204ENST00000509208 ROBO2Q9HCK4 1378 aa15.06■□□□□ 0
COPG1-204ENST00000509208 ARHGEF28Q8N1W1 1705 aaKnown RBP15.06■□□□□ 0
COPG1-204ENST00000509208 TMEM132EQ6IEE7 984 aa15.05■□□□□ -0
COPG1-204ENST00000509208 DLC1Q96QB1 1528 aa15.03■□□□□ -0
COPG1-204ENST00000509208 ABCC11Q96J66 1382 aa15.03■□□□□ -0
COPG1-204ENST00000509208 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
COPG1-204ENST00000509208 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.03■□□□□ -0
COPG1-204ENST00000509208 PROSER2Q86WR7 435 aaPredicted RBP15.02■□□□□ -0
COPG1-204ENST00000509208 RALGAPBQ86X10 1494 aa15.01□□□□□ -0.01
COPG1-204ENST00000509208 ADGRL3Q9HAR2 1447 aa15.01□□□□□ -0.01
COPG1-204ENST00000509208 NBPF8Q3BBV2 869 aa15.01□□□□□ -0.01
COPG1-204ENST00000509208 NCOA3Q9Y6Q9 1424 aa15□□□□□ -0.01
COPG1-204ENST00000509208 FAM135BQ49AJ0 1406 aa15□□□□□ -0.01
COPG1-204ENST00000509208 PLEKHH1Q9ULM0 1364 aa14.99□□□□□ -0.01
COPG1-204ENST00000509208 STK26Q9P289 416 aa14.99□□□□□ -0.01
COPG1-204ENST00000509208 NBPF1Q3BBV0 1214 aa14.98□□□□□ -0.01
COPG1-204ENST00000509208 CDC42BPGQ6DT37 1551 aa14.98□□□□□ -0.01
COPG1-204ENST00000509208 GPRASP1Q5JY77 1395 aa14.98□□□□□ -0.01
COPG1-204ENST00000509208 DCCP43146 1447 aa14.97□□□□□ -0.01
COPG1-204ENST00000509208 ADGRB2O60241 1585 aa14.97□□□□□ -0.01
COPG1-204ENST00000509208 ROCK2O75116 1388 aaKnown RBP14.97□□□□□ -0.01
COPG1-204ENST00000509208 MSH6P52701 1360 aa14.97□□□□□ -0.01
COPG1-204ENST00000509208 QRICH2Q9H0J4 1663 aa14.94□□□□□ -0.02
COPG1-204ENST00000509208 WAPLQ7Z5K2 1190 aa14.94□□□□□ -0.02
COPG1-204ENST00000509208 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
COPG1-204ENST00000509208 FMN2Q9NZ56 1722 aa14.93□□□□□ -0.02
COPG1-204ENST00000509208 UBAP1LF5GYI3 381 aa14.93□□□□□ -0.02
COPG1-204ENST00000509208 C14orf37Q86TY3 774 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms