RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 PLB1Q6P1J6 1458 aa18.41■□□□□ 0.54
ATP2C1-214ENST00000508532 EFCAB2Q5VUJ9 269 aa18.41■□□□□ 0.54
ATP2C1-214ENST00000508532 DZIP1LQ8IYY4 767 aaKnown RBP18.41■□□□□ 0.54
ATP2C1-214ENST00000508532 PLEKHH1Q9ULM0 1364 aa18.41■□□□□ 0.54
ATP2C1-214ENST00000508532 PTMAP06454 111 aaKnown RBP18.41■□□□□ 0.54
ATP2C1-214ENST00000508532 APBB1O00213 710 aa18.41■□□□□ 0.54
ATP2C1-214ENST00000508532 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
ATP2C1-214ENST00000508532 NUTM2DQ5VT03 806 aaPredicted RBP18.4■□□□□ 0.54
ATP2C1-214ENST00000508532 MCM4P33991 863 aa18.39■□□□□ 0.54
ATP2C1-214ENST00000508532 RUNDC1Q96C34 613 aa18.39■□□□□ 0.54
ATP2C1-214ENST00000508532 CFAP70Q5T0N1 1121 aa18.39■□□□□ 0.53
ATP2C1-214ENST00000508532 SRPK2P78362 688 aaKnown RBP18.39■□□□□ 0.53
ATP2C1-214ENST00000508532 LNPKQ9C0E8 428 aa18.39■□□□□ 0.53
ATP2C1-214ENST00000508532 IPO8O15397 1037 aaKnown RBP18.38■□□□□ 0.53
ATP2C1-214ENST00000508532 TBC1D2Q9BYX2 928 aa18.38■□□□□ 0.53
ATP2C1-214ENST00000508532 KDM2BQ8NHM5 1336 aa18.38■□□□□ 0.53
ATP2C1-214ENST00000508532 STK26Q9P289 416 aa18.38■□□□□ 0.53
ATP2C1-214ENST00000508532 DNTTIP2Q5QJE6 756 aaKnown RBP18.38■□□□□ 0.53
ATP2C1-214ENST00000508532 KANK1Q14678 1352 aa18.37■□□□□ 0.53
ATP2C1-214ENST00000508532 TESK2Q96S53 571 aa18.37■□□□□ 0.53
ATP2C1-214ENST00000508532 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
ATP2C1-214ENST00000508532 WWC1Q8IX03 1113 aa18.37■□□□□ 0.53
ATP2C1-214ENST00000508532 SPAG9O60271 1321 aaKnown RBP18.37■□□□□ 0.53
ATP2C1-214ENST00000508532 MRE11P49959 708 aa18.37■□□□□ 0.53
ATP2C1-214ENST00000508532 GPATCH8Q9UKJ3 1502 aaKnown RBP18.36■□□□□ 0.53
ATP2C1-214ENST00000508532 STAG3Q9UJ98 1225 aa18.36■□□□□ 0.53
ATP2C1-214ENST00000508532 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
ATP2C1-214ENST00000508532 ANKRD45Q5TZF3 282 aa18.36■□□□□ 0.53
ATP2C1-214ENST00000508532 GCC2Q8IWJ2 1684 aa18.36■□□□□ 0.53
ATP2C1-214ENST00000508532 DDX49Q9Y6V7 483 aaKnown RBP18.35■□□□□ 0.53
ATP2C1-214ENST00000508532 ARHGEF11O15085 1522 aa18.35■□□□□ 0.53
ATP2C1-214ENST00000508532 MTHFSP49914 203 aa18.35■□□□□ 0.53
ATP2C1-214ENST00000508532 PTPRGP23470 1445 aa18.35■□□□□ 0.53
ATP2C1-214ENST00000508532 ELL2O00472 640 aaPredicted RBP18.35■□□□□ 0.53
ATP2C1-214ENST00000508532 UBE2Q2Q8WVN8 375 aa18.35■□□□□ 0.53
ATP2C1-214ENST00000508532 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
ATP2C1-214ENST00000508532 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
ATP2C1-214ENST00000508532 TSR2Q969E8 191 aaKnown RBP18.34■□□□□ 0.53
ATP2C1-214ENST00000508532 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.52
ATP2C1-214ENST00000508532 NUP153P49790 1475 aaKnown RBP18.33■□□□□ 0.52
ATP2C1-214ENST00000508532 GGT6Q6P531 493 aa18.33■□□□□ 0.52
ATP2C1-214ENST00000508532 PANK2Q9BZ23 570 aa18.33■□□□□ 0.52
ATP2C1-214ENST00000508532 KIAA0586Q9BVV6 1533 aa18.32■□□□□ 0.52
ATP2C1-214ENST00000508532 DDX19BQ9UMR2 479 aa18.31■□□□□ 0.52
ATP2C1-214ENST00000508532 SAMD9Q5K651 1589 aa18.31■□□□□ 0.52
ATP2C1-214ENST00000508532 AMER1Q5JTC6 1135 aaPredicted RBP18.31■□□□□ 0.52
ATP2C1-214ENST00000508532 SLC12A5Q9H2X9 1139 aa18.31■□□□□ 0.52
ATP2C1-214ENST00000508532 CALD1Q05682 793 aaKnown RBP18.31■□□□□ 0.52
ATP2C1-214ENST00000508532 FOXD4L5Q5VV16 416 aaPredicted RBP18.3■□□□□ 0.52
ATP2C1-214ENST00000508532 FOXD4L4Q8WXT5 416 aaPredicted RBP18.3■□□□□ 0.52
ATP2C1-214ENST00000508532 RARSP54136 660 aaKnown RBP18.3■□□□□ 0.52
ATP2C1-214ENST00000508532 TNNQ9UQP3 1299 aa18.3■□□□□ 0.52
ATP2C1-214ENST00000508532 PLCB2Q00722 1185 aa18.3■□□□□ 0.52
ATP2C1-214ENST00000508532 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
ATP2C1-214ENST00000508532 PCDHB15Q9Y5E8 787 aa18.3■□□□□ 0.52
ATP2C1-214ENST00000508532 GRPEL1Q9HAV7 217 aa18.29■□□□□ 0.52
ATP2C1-214ENST00000508532 PRAG1Q86YV5 1406 aa18.29■□□□□ 0.52
ATP2C1-214ENST00000508532 XRCC6P12956 609 aaKnown RBP eCLIP18.29■□□□□ 0.52
ATP2C1-214ENST00000508532 EXOSC9Q06265 439 aaKnown RBP18.28■□□□□ 0.52
ATP2C1-214ENST00000508532 RRAGDQ9NQL2 400 aaPredicted RBP18.28■□□□□ 0.52
ATP2C1-214ENST00000508532 DNMT1P26358 1616 aaKnown RBP18.28■□□□□ 0.52
ATP2C1-214ENST00000508532 UHRF1BP1Q6BDS2 1440 aa18.28■□□□□ 0.52
ATP2C1-214ENST00000508532 WDR62O43379 1518 aa18.27■□□□□ 0.52
ATP2C1-214ENST00000508532 TBC1D32Q96NH3 1257 aa18.27■□□□□ 0.52
ATP2C1-214ENST00000508532 CHMP4BQ9H444 224 aaKnown RBP18.27■□□□□ 0.52
ATP2C1-214ENST00000508532 TMEM132EQ6IEE7 984 aa18.27■□□□□ 0.51
ATP2C1-214ENST00000508532 ESPNB1AK53 854 aa18.27■□□□□ 0.51
ATP2C1-214ENST00000508532 AFAP1Q8N556 730 aa18.27■□□□□ 0.51
ATP2C1-214ENST00000508532 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.51
ATP2C1-214ENST00000508532 MVPQ14764 893 aaKnown RBP18.26■□□□□ 0.51
ATP2C1-214ENST00000508532 PTMSP20962 102 aa18.25■□□□□ 0.51
ATP2C1-214ENST00000508532 SKOR2Q2VWA4 1001 aaPredicted RBP18.25■□□□□ 0.51
ATP2C1-214ENST00000508532 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
ATP2C1-214ENST00000508532 KIF14Q15058 1648 aa18.25■□□□□ 0.51
ATP2C1-214ENST00000508532 AAMPQ13685 434 aa18.25■□□□□ 0.51
ATP2C1-214ENST00000508532 RIPK4P57078 832 aa18.24■□□□□ 0.51
ATP2C1-214ENST00000508532 PKNOX2Q96KN3 472 aa18.23■□□□□ 0.51
ATP2C1-214ENST00000508532 RLBP1P12271 317 aa18.23■□□□□ 0.51
ATP2C1-214ENST00000508532 KDM5CP41229 1560 aa18.22■□□□□ 0.51
ATP2C1-214ENST00000508532 MAGI1Q96QZ7 1491 aaPredicted RBP18.22■□□□□ 0.51
ATP2C1-214ENST00000508532 NOL8Q76FK4 1167 aaKnown RBP18.22■□□□□ 0.51
ATP2C1-214ENST00000508532 FAM13BQ9NYF5 915 aa18.22■□□□□ 0.51
ATP2C1-214ENST00000508532 ARHGAP5Q13017 1502 aa18.22■□□□□ 0.51
ATP2C1-214ENST00000508532 NASPP49321 788 aaPredicted RBP18.22■□□□□ 0.51
ATP2C1-214ENST00000508532 C1orf115Q9H7X2 142 aa18.21■□□□□ 0.51
ATP2C1-214ENST00000508532 ZNF608Q9ULD9 1512 aaPredicted RBP18.21■□□□□ 0.51
ATP2C1-214ENST00000508532 GGNBP2Q9H3C7 697 aa18.21■□□□□ 0.51
ATP2C1-214ENST00000508532 NOB1Q9ULX3 412 aaKnown RBP18.21■□□□□ 0.51
ATP2C1-214ENST00000508532 NINLQ9Y2I6 1382 aa18.21■□□□□ 0.51
ATP2C1-214ENST00000508532 FOXD4L6Q3SYB3 417 aaPredicted RBP18.2■□□□□ 0.5
ATP2C1-214ENST00000508532 FOXD4L3Q6VB84 417 aaPredicted RBP18.2■□□□□ 0.5
ATP2C1-214ENST00000508532 BLMP54132 1417 aaPredicted RBP18.2■□□□□ 0.5
ATP2C1-214ENST00000508532 MCTP1Q6DN14 999 aa18.2■□□□□ 0.5
ATP2C1-214ENST00000508532 ARHGEF12Q9NZN5 1544 aa18.2■□□□□ 0.5
ATP2C1-214ENST00000508532 WDR63Q8IWG1 891 aa18.19■□□□□ 0.5
ATP2C1-214ENST00000508532 NPM1P06748 294 aaKnown RBP eCLIP18.19■□□□□ 0.5
ATP2C1-214ENST00000508532 CCDC141Q6ZP82 1450 aa18.19■□□□□ 0.5
ATP2C1-214ENST00000508532 ZMYM4Q5VZL5 1548 aa18.18■□□□□ 0.5
ATP2C1-214ENST00000508532 MRC2Q9UBG0 1479 aa18.18■□□□□ 0.5
ATP2C1-214ENST00000508532 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms