RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SLC26A8Q96RN1 970 aa3.94□□□□□ -1.78
NEDD4-208ENST00000508342 ZMYM3Q14202 1370 aa3.94□□□□□ -1.78
NEDD4-208ENST00000508342 CDC42BPAQ5VT25 1732 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 XPCQ01831 940 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-208ENST00000508342 NUTM2GQ5VZR2 741 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEDD4-208ENST00000508342 SAMD9Q5K651 1589 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 BCORL1Q5H9F3 1711 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 CAMSAP1Q5T5Y3 1602 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 AMPHP49418 695 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEDD4-208ENST00000508342 DUOX2Q9NRD8 1548 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.93□□□□□ -1.782e-6■■■□□ 17.5
NEDD4-208ENST00000508342 KDM5DQ9BY66 1539 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 CDCA8Q53HL2 280 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 GCC2Q8IWJ2 1684 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 DISP1Q96F81 1524 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 NBPF8Q3BBV2 869 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 NBPF14Q5TI25 921 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 CCDC144AA2RUR9 1427 aa3.93□□□□□ -1.78
NEDD4-208ENST00000508342 TNNT2P45379 298 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-208ENST00000508342 ZNF644Q9H582 1327 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-208ENST00000508342 ROCK2O75116 1388 aaKnown RBP3.92□□□□□ -1.78
NEDD4-208ENST00000508342 ABCA9Q8IUA7 1624 aa3.92□□□□□ -1.78
NEDD4-208ENST00000508342 KDM5CP41229 1560 aa3.92□□□□□ -1.78
NEDD4-208ENST00000508342 UGGT1Q9NYU2 1555 aa3.92□□□□□ -1.78
NEDD4-208ENST00000508342 FBXO31Q5XUX0 539 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-208ENST00000508342 DHX57Q6P158 1386 aaKnown RBP3.92□□□□□ -1.78
NEDD4-208ENST00000508342 TRAK1Q9UPV9 953 aa3.92□□□□□ -1.78
NEDD4-208ENST00000508342 ERBINQ96RT1 1412 aa3.92□□□□□ -1.78
NEDD4-208ENST00000508342 KDM5BQ9UGL1 1544 aa3.92□□□□□ -1.78
NEDD4-208ENST00000508342 MINK1Q8N4C8 1332 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-208ENST00000508342 SMG6Q86US8 1419 aaKnown RBP3.92□□□□□ -1.78
NEDD4-208ENST00000508342 POLR1AO95602 1720 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-208ENST00000508342 CARD11Q9BXL7 1154 aa3.92□□□□□ -1.78
NEDD4-208ENST00000508342 PHLPP1O60346 1717 aa3.92□□□□□ -1.78
NEDD4-208ENST00000508342 CDC42BPBQ9Y5S2 1711 aa3.92□□□□□ -1.78
NEDD4-208ENST00000508342 RRBP1Q9P2E9 1410 aaKnown RBP3.91□□□□□ -1.78
NEDD4-208ENST00000508342 SLC4A2P04920 1241 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 TIAM1Q13009 1591 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 VPS8Q8N3P4 1428 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 HSP90B1P14625 803 aaKnown RBP3.91□□□□□ -1.78
NEDD4-208ENST00000508342 TOM1L2Q6ZVM7 507 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 ARHGEF40Q8TER5 1519 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 USP21Q9UK80 565 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 C1orf141Q5JVX7 400 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 ABTB2Q8N961 1025 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 BBXQ8WY36 941 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-208ENST00000508342 MAGI3Q5TCQ9 1506 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 PMFBP1Q8TBY8 1022 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 PTPRMP28827 1452 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 LRRC9Q6ZRR7 1453 aa3.91□□□□□ -1.78
NEDD4-208ENST00000508342 TRAPPC8Q9Y2L5 1435 aa3.9□□□□□ -1.78
NEDD4-208ENST00000508342 C3P01024 1663 aa3.9□□□□□ -1.78
NEDD4-208ENST00000508342 KDM4FA0A1W2PPD8 638 aa3.9□□□□□ -1.78
NEDD4-208ENST00000508342 LAS1LQ9Y4W2 734 aaKnown RBP3.9□□□□□ -1.78
NEDD4-208ENST00000508342 HIRIP3Q9BW71 556 aaPredicted RBP3.9□□□□□ -1.78
NEDD4-208ENST00000508342 ECM2O94769 699 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-208ENST00000508342 CFAP53Q96M91 514 aa3.9□□□□□ -1.79
NEDD4-208ENST00000508342 GOLGA2Q08379 1002 aa3.9□□□□□ -1.79
NEDD4-208ENST00000508342 WDR43Q15061 677 aaKnown RBP eCLIP3.9□□□□□ -1.79
NEDD4-208ENST00000508342 RTF1Q92541 710 aaKnown RBP3.9□□□□□ -1.79
NEDD4-208ENST00000508342 IQGAP1P46940 1657 aa3.9□□□□□ -1.79
NEDD4-208ENST00000508342 NPHP4O75161 1426 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-208ENST00000508342 NUP153P49790 1475 aaKnown RBP3.9□□□□□ -1.79
NEDD4-208ENST00000508342 SAMD9LQ8IVG5 1584 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 ZC3H13Q5T200 1668 aaKnown RBP3.89□□□□□ -1.79
NEDD4-208ENST00000508342 KANK4Q5T7N3 995 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-208ENST00000508342 CADPS2Q86UW7 1296 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 BCL11BQ9C0K0 894 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-208ENST00000508342 ATXN8OSP0DMR3 200 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 SPATA31D1Q6ZQQ2 1576 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 HMGB2P26583 209 aaKnown RBP3.89□□□□□ -1.79
NEDD4-208ENST00000508342 FBXW7Q969H0 707 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 DAPK1P53355 1430 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 WASHC2AQ641Q2 1341 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 POLD1P28340 1107 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 QTRT2Q9H974 415 aaKnown RBP3.89□□□□□ -1.79
NEDD4-208ENST00000508342 MAGI2Q86UL8 1455 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 TMF1P82094 1093 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 TERF2IPQ9NYB0 399 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 AMOTL2Q9Y2J4 779 aa3.89□□□□□ -1.79
NEDD4-208ENST00000508342 MAST1Q9Y2H9 1570 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 RIMS2Q9UQ26 1411 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 PNNQ9H307 717 aaKnown RBP3.88□□□□□ -1.79
NEDD4-208ENST00000508342 GTF2E1P29083 439 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-208ENST00000508342 LRRC59Q96AG4 307 aaKnown RBP3.88□□□□□ -1.79
NEDD4-208ENST00000508342 ATF5Q9Y2D1 282 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-208ENST00000508342 KNSTRNQ9Y448 316 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 EVC2Q86UK5 1308 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 SLC52A1Q9NWF4 448 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 PRXQ9BXM0 1461 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 RICTORQ6R327 1708 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 KRT28Q7Z3Y7 464 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 COG3Q96JB2 828 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 YEATS2Q9ULM3 1422 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 TRPM2O94759 1503 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 MPHOSPH9Q99550 1183 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 CROCC2H7BZ55 1655 aa3.88□□□□□ -1.79
NEDD4-208ENST00000508342 U2SURPO15042 1029 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms