RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 DCAF11Q8TEB1 546 aa30.03■■■□□ 2.4
HOXC9-203ENST00000508190 ARHGAP23Q9P227 1491 aa30.03■■■□□ 2.4
HOXC9-203ENST00000508190 NUTM2DQ5VT03 806 aaPredicted RBP30.02■■■□□ 2.4
HOXC9-203ENST00000508190 THEMISQ8N1K5 641 aaPredicted RBP30.02■■■□□ 2.4
HOXC9-203ENST00000508190 KDM2AQ9Y2K7 1162 aa30.01■■■□□ 2.39
HOXC9-203ENST00000508190 RPGRIP1LQ68CZ1 1315 aa30■■■□□ 2.39
HOXC9-203ENST00000508190 POLR1AO95602 1720 aaPredicted RBP30■■■□□ 2.39
HOXC9-203ENST00000508190 MYOM2P54296 1465 aa29.98■■■□□ 2.39
HOXC9-203ENST00000508190 TIMELESSQ9UNS1 1208 aa29.98■■■□□ 2.39
HOXC9-203ENST00000508190 HSPA2P54652 639 aa29.95■■■□□ 2.38
HOXC9-203ENST00000508190 ADGRF5Q8IZF2 1346 aa29.94■■■□□ 2.38
HOXC9-203ENST00000508190 LTKP29376 864 aa29.92■■■□□ 2.38
HOXC9-203ENST00000508190 IQGAP1P46940 1657 aa29.92■■■□□ 2.38
HOXC9-203ENST00000508190 SCAF11Q99590 1463 aaKnown RBP29.91■■■□□ 2.38
HOXC9-203ENST00000508190 NRXN1Q9ULB1 1477 aa29.91■■■□□ 2.38
HOXC9-203ENST00000508190 TXNDC2Q86VQ3 553 aa29.91■■■□□ 2.38
HOXC9-203ENST00000508190 SENP3Q9H4L4 574 aaPredicted RBP29.91■■■□□ 2.38
HOXC9-203ENST00000508190 PRAG1Q86YV5 1406 aa29.89■■■□□ 2.38
HOXC9-203ENST00000508190 STRCQ7RTU9 1775 aa29.89■■■□□ 2.38
HOXC9-203ENST00000508190 VGFO15240 615 aaPredicted RBP29.89■■■□□ 2.38
HOXC9-203ENST00000508190 PPP1R15AO75807 674 aaPredicted RBP29.89■■■□□ 2.38
HOXC9-203ENST00000508190 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.89■■■□□ 2.38
HOXC9-203ENST00000508190 NRXN3Q9Y4C0 1643 aa29.89■■■□□ 2.37
HOXC9-203ENST00000508190 EID1Q9Y6B2 187 aa29.88■■■□□ 2.37
HOXC9-203ENST00000508190 HDGFP51858 240 aaKnown RBP29.86■■■□□ 2.37
HOXC9-203ENST00000508190 NBPF8Q3BBV2 869 aa29.86■■■□□ 2.37
HOXC9-203ENST00000508190 PIK3C2GO75747 1445 aa29.86■■■□□ 2.37
HOXC9-203ENST00000508190 TRPM1Q7Z4N2 1603 aa29.86■■■□□ 2.37
HOXC9-203ENST00000508190 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
HOXC9-203ENST00000508190 ZEB1P37275 1124 aaPredicted RBP29.85■■■□□ 2.37
HOXC9-203ENST00000508190 ANKLE2Q86XL3 938 aa29.85■■■□□ 2.37
HOXC9-203ENST00000508190 STAC3Q96MF2 364 aa29.85■■■□□ 2.37
HOXC9-203ENST00000508190 SETD1AO15047 1707 aaKnown RBP29.84■■■□□ 2.37
HOXC9-203ENST00000508190 SETBP1Q9Y6X0 1596 aa29.83■■■□□ 2.37
HOXC9-203ENST00000508190 NCKAP5LQ9HCH0 1330 aa29.83■■■□□ 2.37
HOXC9-203ENST00000508190 KIAA1210Q9ULL0 1709 aa29.83■■■□□ 2.37
HOXC9-203ENST00000508190 PLEKHG1Q9ULL1 1385 aa29.82■■■□□ 2.36
HOXC9-203ENST00000508190 LAMC1P11047 1609 aa29.81■■■□□ 2.36
HOXC9-203ENST00000508190 ALKQ9UM73 1620 aa29.8■■■□□ 2.36
HOXC9-203ENST00000508190 MED14O60244 1454 aa29.78■■■□□ 2.36
HOXC9-203ENST00000508190 NPHP4O75161 1426 aaPredicted RBP29.77■■■□□ 2.36
HOXC9-203ENST00000508190 BCANQ96GW7 911 aa29.76■■■□□ 2.35
HOXC9-203ENST00000508190 ADAMTS13Q76LX8 1427 aa29.75■■■□□ 2.35
HOXC9-203ENST00000508190 CFAP70Q5T0N1 1121 aa29.75■■■□□ 2.35
HOXC9-203ENST00000508190 RALGAPBQ86X10 1494 aa29.75■■■□□ 2.35
HOXC9-203ENST00000508190 ASXL1Q8IXJ9 1541 aa29.72■■■□□ 2.35
HOXC9-203ENST00000508190 C14orf93Q9H972 538 aaKnown RBP29.71■■■□□ 2.35
HOXC9-203ENST00000508190 DIP2AQ14689 1571 aa29.71■■■□□ 2.35
HOXC9-203ENST00000508190 SLC26A8Q96RN1 970 aa29.7■■■□□ 2.34
HOXC9-203ENST00000508190 NBPF1Q3BBV0 1214 aa29.69■■■□□ 2.34
HOXC9-203ENST00000508190 ADGRB1O14514 1584 aa29.69■■■□□ 2.34
HOXC9-203ENST00000508190 ROCK2O75116 1388 aaKnown RBP29.66■■■□□ 2.34
HOXC9-203ENST00000508190 TMEM132EQ6IEE7 984 aa29.64■■■□□ 2.34
HOXC9-203ENST00000508190 METP08581 1390 aa29.64■■■□□ 2.34
HOXC9-203ENST00000508190 CHD2O14647 1828 aaKnown RBP29.63■■■□□ 2.33
HOXC9-203ENST00000508190 GPRASP1Q5JY77 1395 aa29.61■■■□□ 2.33
HOXC9-203ENST00000508190 TBX22Q9Y458 520 aa29.61■■■□□ 2.33
HOXC9-203ENST00000508190 KNDC1Q76NI1 1749 aa29.58■■■□□ 2.33
HOXC9-203ENST00000508190 CARD11Q9BXL7 1154 aa29.57■■■□□ 2.32
HOXC9-203ENST00000508190 ARHGEF28Q8N1W1 1705 aaKnown RBP29.56■■■□□ 2.32
HOXC9-203ENST00000508190 PTPRUQ92729 1446 aa29.56■■■□□ 2.32
HOXC9-203ENST00000508190 XRN1Q8IZH2 1706 aaKnown RBP29.56■■■□□ 2.32
HOXC9-203ENST00000508190 YTHDC2Q9H6S0 1430 aaKnown RBP29.56■■■□□ 2.32
HOXC9-203ENST00000508190 STRCP1A6NGW2 1772 aa29.55■■■□□ 2.32
HOXC9-203ENST00000508190 STK26Q9P289 416 aa29.52■■■□□ 2.32
HOXC9-203ENST00000508190 LRPPRCP42704 1394 aaKnown RBP29.51■■■□□ 2.31
HOXC9-203ENST00000508190 PIK3R4Q99570 1358 aa29.51■■■□□ 2.31
HOXC9-203ENST00000508190 NWD1Q149M9 1564 aa29.5■■■□□ 2.31
HOXC9-203ENST00000508190 CPS1P31327 1500 aa29.48■■■□□ 2.31
HOXC9-203ENST00000508190 TRAK1Q9UPV9 953 aa29.48■■■□□ 2.31
HOXC9-203ENST00000508190 DMRT2Q9Y5R5 561 aa29.48■■■□□ 2.31
HOXC9-203ENST00000508190 USP47Q96K76 1375 aa29.47■■■□□ 2.31
HOXC9-203ENST00000508190 AMOTL2Q9Y2J4 779 aa29.45■■■□□ 2.31
HOXC9-203ENST00000508190 DLC1Q96QB1 1528 aa29.45■■■□□ 2.3
HOXC9-203ENST00000508190 ABCC11Q96J66 1382 aa29.44■■■□□ 2.3
HOXC9-203ENST00000508190 TECPR2O15040 1411 aa29.44■■■□□ 2.3
HOXC9-203ENST00000508190 QRICH2Q9H0J4 1663 aa29.43■■■□□ 2.3
HOXC9-203ENST00000508190 KCNA6P17658 529 aa29.41■■■□□ 2.3
HOXC9-203ENST00000508190 ROBO2Q9HCK4 1378 aa29.41■■■□□ 2.3
HOXC9-203ENST00000508190 PTCH1Q13635 1447 aa29.39■■■□□ 2.3
HOXC9-203ENST00000508190 ZNF335Q9H4Z2 1342 aaPredicted RBP29.39■■■□□ 2.3
HOXC9-203ENST00000508190 EIF3AQ14152 1382 aaKnown RBP29.38■■■□□ 2.29
HOXC9-203ENST00000508190 HSPA5P11021 654 aaKnown RBP29.38■■■□□ 2.29
HOXC9-203ENST00000508190 EIF4G2P78344 907 aaKnown RBP eCLIP29.38■■■□□ 2.29
HOXC9-203ENST00000508190 PLEKHH1Q9ULM0 1364 aa29.37■■■□□ 2.29
HOXC9-203ENST00000508190 NKTRP30414 1462 aaKnown RBP29.36■■■□□ 2.29
HOXC9-203ENST00000508190 HIRIP3Q9BW71 556 aaPredicted RBP29.36■■■□□ 2.29
HOXC9-203ENST00000508190 WAPLQ7Z5K2 1190 aa29.35■■■□□ 2.29
HOXC9-203ENST00000508190 PRAM1Q96QH2 718 aa29.35■■■□□ 2.29
HOXC9-203ENST00000508190 ST20-MTHFSA0A0A6YYL1 179 aa29.35■■■□□ 2.29
HOXC9-203ENST00000508190 XIRP1Q702N8 1843 aaKnown RBP29.35■■■□□ 2.29
HOXC9-203ENST00000508190 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.34■■■□□ 2.29
HOXC9-203ENST00000508190 FAM135BQ49AJ0 1406 aa29.34■■■□□ 2.29
HOXC9-203ENST00000508190 SAFB2Q14151 953 aaKnown RBP eCLIP29.33■■■□□ 2.29
HOXC9-203ENST00000508190 CENPJQ9HC77 1338 aaPredicted RBP29.32■■■□□ 2.28
HOXC9-203ENST00000508190 POGKQ9P215 609 aa29.31■■■□□ 2.28
HOXC9-203ENST00000508190 NALCNQ8IZF0 1738 aa29.31■■■□□ 2.28
HOXC9-203ENST00000508190 SIRT1Q96EB6 747 aa29.3■■■□□ 2.28
HOXC9-203ENST00000508190 RBM33Q96EV2 1170 aaKnown RBP29.29■■■□□ 2.28
HOXC9-203ENST00000508190 LTBP4Q8N2S1 1624 aa29.26■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms