RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MAGI3Q5TCQ9 1506 aa6.66□□□□□ -1.34
HMGB3P16-201ENST00000508037 DEKP35659 375 aaKnown RBP6.65□□□□□ -1.34
HMGB3P16-201ENST00000508037 B4GALNT3Q6L9W6 998 aa6.65□□□□□ -1.34
HMGB3P16-201ENST00000508037 IPO9Q96P70 1041 aaKnown RBP6.65□□□□□ -1.34
HMGB3P16-201ENST00000508037 NKX1-1Q15270 411 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P16-201ENST00000508037 KIAA1107Q9UPP5 1409 aa6.64□□□□□ -1.35
HMGB3P16-201ENST00000508037 ABCC5O15440 1437 aa6.63□□□□□ -1.35
HMGB3P16-201ENST00000508037 ST18O60284 1047 aa6.63□□□□□ -1.35
HMGB3P16-201ENST00000508037 BRD4O60885 1362 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P16-201ENST00000508037 PPP1R37O75864 691 aa6.63□□□□□ -1.35
HMGB3P16-201ENST00000508037 PDE3BQ13370 1112 aa6.63□□□□□ -1.35
HMGB3P16-201ENST00000508037 KIF14Q15058 1648 aa6.63□□□□□ -1.35
HMGB3P16-201ENST00000508037 RALBP1Q15311 655 aa6.63□□□□□ -1.35
HMGB3P16-201ENST00000508037 USP47Q96K76 1375 aa6.63□□□□□ -1.35
HMGB3P16-201ENST00000508037 KIF15Q9NS87 1388 aa6.63□□□□□ -1.35
HMGB3P16-201ENST00000508037 MBD5Q9P267 1494 aa6.63□□□□□ -1.35
HMGB3P16-201ENST00000508037 KDM6BO15054 1643 aa6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 ADAMTS12P58397 1594 aa6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 ARHGEF12Q9NZN5 1544 aa6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 ADGRL2O95490 1459 aa6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 DHX29Q7Z478 1369 aaKnown RBP6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 POTEMA6NI47 508 aa6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 C11orf95C9JLR9 678 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 TCERG1O14776 1098 aaKnown RBP6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 NBPF8Q3BBV2 869 aa6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 CCDC184Q52MB2 194 aa6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 TMC1Q8TDI8 760 aa6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 USP35Q9P2H5 1018 aa6.62□□□□□ -1.35
HMGB3P16-201ENST00000508037 ADGBQ8N7X0 1667 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 ITSN2Q9NZM3 1697 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 TARBP1Q13395 1621 aaKnown RBP6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 UHRF1BP1Q6BDS2 1440 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 INSRP06213 1382 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 ANKRD30AQ9BXX3 1397 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 MS4A1P11836 297 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 DOK7Q18PE1 504 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 POTEGQ6S5H5 508 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 TMEM92Q6UXU6 159 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 TMC2Q8TDI7 906 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 PBRM1Q86U86 1689 aa6.61□□□□□ -1.35
HMGB3P16-201ENST00000508037 CDK13Q14004 1512 aaKnown RBP6.6□□□□□ -1.35
HMGB3P16-201ENST00000508037 RALGAPBQ86X10 1494 aa6.6□□□□□ -1.35
HMGB3P16-201ENST00000508037 MYBBP1AQ9BQG0 1328 aaKnown RBP6.6□□□□□ -1.35
HMGB3P16-201ENST00000508037 LCE2DQ5TA82 110 aaPredicted RBP6.6□□□□□ -1.35
HMGB3P16-201ENST00000508037 ZNF710Q8N1W2 664 aa6.6□□□□□ -1.35
HMGB3P16-201ENST00000508037 ZMYM4Q5VZL5 1548 aa6.6□□□□□ -1.35
HMGB3P16-201ENST00000508037 KIAA0586Q9BVV6 1533 aa6.6□□□□□ -1.35
HMGB3P16-201ENST00000508037 PZPP20742 1482 aa6.6□□□□□ -1.35
HMGB3P16-201ENST00000508037 TROQ12816 1431 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P16-201ENST00000508037 RAPGEF6Q8TEU7 1601 aa6.59□□□□□ -1.35
HMGB3P16-201ENST00000508037 RIMBP2O15034 1052 aa6.59□□□□□ -1.35
HMGB3P16-201ENST00000508037 PPM1GO15355 546 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P16-201ENST00000508037 GTPBP6O43824 516 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P16-201ENST00000508037 PNISRQ8TF01 805 aaKnown RBP6.59□□□□□ -1.35
HMGB3P16-201ENST00000508037 BBXQ8WY36 941 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P16-201ENST00000508037 DDRGK1Q96HY6 314 aa6.59□□□□□ -1.35
HMGB3P16-201ENST00000508037 KDM5CP41229 1560 aa6.59□□□□□ -1.35
HMGB3P16-201ENST00000508037 CAMSAP2Q08AD1 1489 aa6.59□□□□□ -1.36
HMGB3P16-201ENST00000508037 SHANK2Q9UPX8 1470 aa6.59□□□□□ -1.36
HMGB3P16-201ENST00000508037 LRPPRCP42704 1394 aaKnown RBP6.58□□□□□ -1.36
HMGB3P16-201ENST00000508037 KIAA0556O60303 1618 aa6.58□□□□□ -1.36
HMGB3P16-201ENST00000508037 WASHC2CQ9Y4E1 1318 aa6.58□□□□□ -1.36
HMGB3P16-201ENST00000508037 C2orf72A6NCS6 295 aa6.58□□□□□ -1.36
HMGB3P16-201ENST00000508037 CFDP1Q9UEE9 299 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P16-201ENST00000508037 HOXB3P14651 431 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P16-201ENST00000508037 RRP1P56182 461 aaKnown RBP6.57□□□□□ -1.36
HMGB3P16-201ENST00000508037 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
HMGB3P16-201ENST00000508037 CARD11Q9BXL7 1154 aa6.57□□□□□ -1.36
HMGB3P16-201ENST00000508037 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P16-201ENST00000508037 NUP153P49790 1475 aaKnown RBP6.57□□□□□ -1.36
HMGB3P16-201ENST00000508037 PLEKHH2Q8IVE3 1493 aa6.57□□□□□ -1.36
HMGB3P16-201ENST00000508037 IFT140Q96RY7 1462 aa6.57□□□□□ -1.36
HMGB3P16-201ENST00000508037 ADCY10Q96PN6 1610 aa6.57□□□□□ -1.36
HMGB3P16-201ENST00000508037 KDM5DQ9BY66 1539 aa6.56□□□□□ -1.36
HMGB3P16-201ENST00000508037 CROCC2H7BZ55 1655 aa6.56□□□□□ -1.36
HMGB3P16-201ENST00000508037 MRC2Q9UBG0 1479 aa6.56□□□□□ -1.36
HMGB3P16-201ENST00000508037 KIF3CO14782 793 aa6.56□□□□□ -1.36
HMGB3P16-201ENST00000508037 NBR1Q14596 966 aa6.56□□□□□ -1.36
HMGB3P16-201ENST00000508037 RCAN3Q9UKA8 241 aa6.56□□□□□ -1.36
HMGB3P16-201ENST00000508037 ANKRD50Q9ULJ7 1429 aa6.56□□□□□ -1.36
HMGB3P16-201ENST00000508037 POLR3GLQ9BT43 218 aa6.55□□□□□ -1.36
HMGB3P16-201ENST00000508037 DISP1Q96F81 1524 aa6.55□□□□□ -1.36
HMGB3P16-201ENST00000508037 GPATCH8Q9UKJ3 1502 aaKnown RBP6.55□□□□□ -1.36
HMGB3P16-201ENST00000508037 BCORL1Q5H9F3 1711 aa6.54□□□□□ -1.36
HMGB3P16-201ENST00000508037 CARMIL2Q6F5E8 1435 aa6.54□□□□□ -1.36
HMGB3P16-201ENST00000508037 EMP3P54852 163 aa6.54□□□□□ -1.36
HMGB3P16-201ENST00000508037 ZNF326Q5BKZ1 582 aaKnown RBP6.54□□□□□ -1.36
HMGB3P16-201ENST00000508037 MARVELD3Q96A59 401 aa6.54□□□□□ -1.36
HMGB3P16-201ENST00000508037 ZSWIM6Q9HCJ5 1215 aa6.54□□□□□ -1.36
HMGB3P16-201ENST00000508037 PCDH10Q9P2E7 1040 aa6.54□□□□□ -1.36
HMGB3P16-201ENST00000508037 NUP155O75694 1391 aa6.54□□□□□ -1.36
HMGB3P16-201ENST00000508037 TSPY4P0CV99 314 aa6.53□□□□□ -1.36
HMGB3P16-201ENST00000508037 TSPY10P0CW01 314 aa6.53□□□□□ -1.36
HMGB3P16-201ENST00000508037 HOXB1P14653 301 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P16-201ENST00000508037 PDE4AP27815 886 aa6.53□□□□□ -1.36
HMGB3P16-201ENST00000508037 RSPH4AQ5TD94 716 aa6.53□□□□□ -1.36
HMGB3P16-201ENST00000508037 GPHNQ9NQX3 736 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P16-201ENST00000508037 DAXXQ9UER7 740 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P16-201ENST00000508037 PARD3Q8TEW0 1356 aa6.53□□□□□ -1.36
HMGB3P16-201ENST00000508037 CEP170Q5SW79 1584 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms