RNA–Protein interactions for RNA: ENST00000507892.1

CCHCR1-225, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-225ENST00000507892 ZNF335Q9H4Z2 1342 aaPredicted RBP34.49■■■■□ 3.11
CCHCR1-225ENST00000507892 LTBP4Q8N2S1 1624 aa34.46■■■■□ 3.11
CCHCR1-225ENST00000507892 HDGFP51858 240 aaKnown RBP34.45■■■■□ 3.11
CCHCR1-225ENST00000507892 NUTM2DQ5VT03 806 aaPredicted RBP34.45■■■■□ 3.11
CCHCR1-225ENST00000507892 ZNF326Q5BKZ1 582 aaKnown RBP34.44■■■■□ 3.1
CCHCR1-225ENST00000507892 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.43■■■■□ 3.1
CCHCR1-225ENST00000507892 CCDC144AA2RUR9 1427 aa34.43■■■■□ 3.1
CCHCR1-225ENST00000507892 PPP1R15AO75807 674 aaPredicted RBP34.42■■■■□ 3.1
CCHCR1-225ENST00000507892 SENP3Q9H4L4 574 aaPredicted RBP34.41■■■■□ 3.1
CCHCR1-225ENST00000507892 CERKQ8TCT0 537 aa34.39■■■■□ 3.1
CCHCR1-225ENST00000507892 PLEKHG1Q9ULL1 1385 aa34.38■■■■□ 3.09
CCHCR1-225ENST00000507892 BCANQ96GW7 911 aa34.37■■■■□ 3.09
CCHCR1-225ENST00000507892 SLC26A8Q96RN1 970 aa34.36■■■■□ 3.09
CCHCR1-225ENST00000507892 NEXMIFQ5QGS0 1516 aa34.35■■■■□ 3.09
CCHCR1-225ENST00000507892 ANKRD30BQ9BXX2 1392 aa34.34■■■■□ 3.09
CCHCR1-225ENST00000507892 STRCP1A6NGW2 1772 aa34.31■■■■□ 3.08
CCHCR1-225ENST00000507892 SPATA31E1Q6ZUB1 1445 aa34.3■■■■□ 3.08
CCHCR1-225ENST00000507892 RGL3Q3MIN7 710 aa34.27■■■■□ 3.08
CCHCR1-225ENST00000507892 RPGRIP1LQ68CZ1 1315 aa34.26■■■■□ 3.07
CCHCR1-225ENST00000507892 PPLO60437 1756 aa34.26■■■■□ 3.07
CCHCR1-225ENST00000507892 CPS1P31327 1500 aa34.25■■■■□ 3.07
CCHCR1-225ENST00000507892 ADAMTS13Q76LX8 1427 aa34.25■■■■□ 3.07
CCHCR1-225ENST00000507892 NRXN3Q9Y4C0 1643 aa34.22■■■■□ 3.07
CCHCR1-225ENST00000507892 TBX22Q9Y458 520 aa34.22■■■■□ 3.07
CCHCR1-225ENST00000507892 SETBP1Q9Y6X0 1596 aa34.21■■■■□ 3.07
CCHCR1-225ENST00000507892 VGFO15240 615 aaPredicted RBP34.19■■■■□ 3.06
CCHCR1-225ENST00000507892 DIP2AQ14689 1571 aa34.19■■■■□ 3.06
CCHCR1-225ENST00000507892 IFT172Q9UG01 1749 aa34.18■■■■□ 3.06
CCHCR1-225ENST00000507892 KCNA6P17658 529 aa34.17■■■■□ 3.06
CCHCR1-225ENST00000507892 IQSEC2Q5JU85 1478 aa34.17■■■■□ 3.06
CCHCR1-225ENST00000507892 CHD2O14647 1828 aaKnown RBP34.15■■■■□ 3.06
CCHCR1-225ENST00000507892 LRRC7Q96NW7 1537 aa34.14■■■■□ 3.06
CCHCR1-225ENST00000507892 NWD1Q149M9 1564 aa34.13■■■■□ 3.05
CCHCR1-225ENST00000507892 FBXO41Q8TF61 875 aa34.12■■■■□ 3.05
CCHCR1-225ENST00000507892 ADGRF5Q8IZF2 1346 aa34.1■■■■□ 3.05
CCHCR1-225ENST00000507892 DHX57Q6P158 1386 aaKnown RBP34.09■■■■□ 3.05
CCHCR1-225ENST00000507892 ILDR1Q86SU0 546 aaPredicted RBP34.08■■■■□ 3.05
CCHCR1-225ENST00000507892 PIK3R4Q99570 1358 aa34.08■■■■□ 3.05
CCHCR1-225ENST00000507892 METP08581 1390 aa34.06■■■■□ 3.04
CCHCR1-225ENST00000507892 XIRP1Q702N8 1843 aaKnown RBP34.05■■■■□ 3.04
CCHCR1-225ENST00000507892 PCGF6Q9BYE7 350 aa34.05■■■■□ 3.04
CCHCR1-225ENST00000507892 PTPRUQ92729 1446 aa34.04■■■■□ 3.04
CCHCR1-225ENST00000507892 ALKQ9UM73 1620 aa34.04■■■■□ 3.04
CCHCR1-225ENST00000507892 SETD1AO15047 1707 aaKnown RBP34.04■■■■□ 3.04
CCHCR1-225ENST00000507892 NKTRP30414 1462 aaKnown RBP34.04■■■■□ 3.04
CCHCR1-225ENST00000507892 PROSER2Q86WR7 435 aaPredicted RBP34.02■■■■□ 3.04
CCHCR1-225ENST00000507892 RBM33Q96EV2 1170 aaKnown RBP34■■■■□ 3.03
CCHCR1-225ENST00000507892 AMOTL2Q9Y2J4 779 aa34■■■■□ 3.03
CCHCR1-225ENST00000507892 TMEM94Q12767 1356 aa33.99■■■■□ 3.03
CCHCR1-225ENST00000507892 MYOM2P54296 1465 aa33.99■■■■□ 3.03
CCHCR1-225ENST00000507892 PIK3C2GO75747 1445 aa33.97■■■■□ 3.03
CCHCR1-225ENST00000507892 XRN1Q8IZH2 1706 aaKnown RBP33.97■■■■□ 3.03
CCHCR1-225ENST00000507892 UBAP1LF5GYI3 381 aa33.96■■■■□ 3.03
CCHCR1-225ENST00000507892 NRXN1Q9ULB1 1477 aa33.95■■■■□ 3.03
CCHCR1-225ENST00000507892 DCAF11Q8TEB1 546 aa33.95■■■■□ 3.03
CCHCR1-225ENST00000507892 SIN3AQ96ST3 1273 aa33.94■■■■□ 3.02
CCHCR1-225ENST00000507892 KDM2AQ9Y2K7 1162 aa33.93■■■■□ 3.02
CCHCR1-225ENST00000507892 TOM1O60784 492 aa33.86■■■■□ 3.01
CCHCR1-225ENST00000507892 NEUROD1Q13562 356 aa33.86■■■■□ 3.01
CCHCR1-225ENST00000507892 C14orf93Q9H972 538 aaKnown RBP33.86■■■■□ 3.01
CCHCR1-225ENST00000507892 CFAP70Q5T0N1 1121 aa33.85■■■■□ 3.01
CCHCR1-225ENST00000507892 ASXL1Q8IXJ9 1541 aa33.84■■■■□ 3.01
CCHCR1-225ENST00000507892 TMEM132EQ6IEE7 984 aa33.84■■■■□ 3.01
CCHCR1-225ENST00000507892 STAC3Q96MF2 364 aa33.84■■■■□ 3.01
CCHCR1-225ENST00000507892 LAMC1P11047 1609 aa33.82■■■■□ 3.01
CCHCR1-225ENST00000507892 NCOA3Q9Y6Q9 1424 aa33.81■■■■□ 3
CCHCR1-225ENST00000507892 C14orf37Q86TY3 774 aa33.8■■■■□ 3
CCHCR1-225ENST00000507892 PIP4K2BP78356 416 aa33.79■■■■□ 3
CCHCR1-225ENST00000507892 MSH6P52701 1360 aa33.79■■■■□ 3
CCHCR1-225ENST00000507892 ROBO2Q9HCK4 1378 aa33.78■■■■□ 3
CCHCR1-225ENST00000507892 PTCH1Q13635 1447 aa33.78■■■■□ 3
CCHCR1-225ENST00000507892 PRAG1Q86YV5 1406 aa33.78■■■■□ 3
CCHCR1-225ENST00000507892 STK26Q9P289 416 aa33.77■■■■□ 3
CCHCR1-225ENST00000507892 SCAF1Q9H7N4 1312 aaKnown RBP33.77■■■■□ 3
CCHCR1-225ENST00000507892 LRPPRCP42704 1394 aaKnown RBP33.76■■■■□ 3
CCHCR1-225ENST00000507892 L3MBTL2Q969R5 705 aa33.76■■■□□ 2.99
CCHCR1-225ENST00000507892 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.74■■■□□ 2.99
CCHCR1-225ENST00000507892 YTHDC2Q9H6S0 1430 aaKnown RBP33.73■■■□□ 2.99
CCHCR1-225ENST00000507892 C19orf44Q9H6X5 657 aa33.72■■■□□ 2.99
CCHCR1-225ENST00000507892 ABCC11Q96J66 1382 aa33.72■■■□□ 2.99
CCHCR1-225ENST00000507892 KNDC1Q76NI1 1749 aa33.71■■■□□ 2.99
CCHCR1-225ENST00000507892 TECPR2O15040 1411 aa33.7■■■□□ 2.99
CCHCR1-225ENST00000507892 ADGRB1O14514 1584 aa33.69■■■□□ 2.98
CCHCR1-225ENST00000507892 NALCNQ8IZF0 1738 aa33.69■■■□□ 2.98
CCHCR1-225ENST00000507892 ADGRL3Q9HAR2 1447 aa33.66■■■□□ 2.98
CCHCR1-225ENST00000507892 ATF3P18847 181 aa33.64■■■□□ 2.98
CCHCR1-225ENST00000507892 WAPLQ7Z5K2 1190 aa33.64■■■□□ 2.98
CCHCR1-225ENST00000507892 KIAA1210Q9ULL0 1709 aa33.63■■■□□ 2.97
CCHCR1-225ENST00000507892 SLAIN2Q9P270 581 aa33.63■■■□□ 2.97
CCHCR1-225ENST00000507892 CADPS2Q86UW7 1296 aa33.62■■■□□ 2.97
CCHCR1-225ENST00000507892 PLEKHH1Q9ULM0 1364 aa33.61■■■□□ 2.97
CCHCR1-225ENST00000507892 DCCP43146 1447 aa33.61■■■□□ 2.97
CCHCR1-225ENST00000507892 SIRT1Q96EB6 747 aa33.59■■■□□ 2.97
CCHCR1-225ENST00000507892 FAM135BQ49AJ0 1406 aa33.58■■■□□ 2.97
CCHCR1-225ENST00000507892 TONSLQ96HA7 1378 aa33.58■■■□□ 2.97
CCHCR1-225ENST00000507892 TRAK1Q9UPV9 953 aa33.57■■■□□ 2.96
CCHCR1-225ENST00000507892 ROBO1Q9Y6N7 1651 aa33.57■■■□□ 2.96
CCHCR1-225ENST00000507892 DLC1Q96QB1 1528 aa33.56■■■□□ 2.96
CCHCR1-225ENST00000507892 HSPA1LP34931 641 aa33.55■■■□□ 2.96
CCHCR1-225ENST00000507892 NBPF1Q3BBV0 1214 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms