RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 USP47Q96K76 1375 aa12.26□□□□□ -0.45
NEK1-203ENST00000507142 NGLY1Q96IV0 654 aa12.25□□□□□ -0.45
NEK1-203ENST00000507142 KIAA1107Q9UPP5 1409 aa12.25□□□□□ -0.45
NEK1-203ENST00000507142 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
NEK1-203ENST00000507142 OS9Q13438 667 aaPredicted RBP12.24□□□□□ -0.45
NEK1-203ENST00000507142 NLRP13Q86W25 1043 aa12.24□□□□□ -0.45
NEK1-203ENST00000507142 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
NEK1-203ENST00000507142 FRAT1Q92837 279 aaPredicted RBP12.24□□□□□ -0.45
NEK1-203ENST00000507142 UHRF1BP1Q6BDS2 1440 aa12.24□□□□□ -0.45
NEK1-203ENST00000507142 TOM1L2Q6ZVM7 507 aa12.24□□□□□ -0.45
NEK1-203ENST00000507142 RTEL1-TNFRSF6BF6WH68 1400 aa12.24□□□□□ -0.45
NEK1-203ENST00000507142 WAPLQ7Z5K2 1190 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 MSH6P52701 1360 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 ZMYM3Q14202 1370 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 TTC5Q8N0Z6 440 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 MIER1Q8N108 512 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 SYCP2Q9BX26 1530 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 LMTK3Q96Q04 1460 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 TEFQ10587 303 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 CADPS2Q86UW7 1296 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 KDM5BQ9UGL1 1544 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 ROCK1Q13464 1354 aa12.23□□□□□ -0.45
NEK1-203ENST00000507142 RALBP1Q15311 655 aa12.22□□□□□ -0.45
NEK1-203ENST00000507142 GGNBP2Q9H3C7 697 aa12.22□□□□□ -0.45
NEK1-203ENST00000507142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.45
NEK1-203ENST00000507142 PDE3BQ13370 1112 aa12.22□□□□□ -0.45
NEK1-203ENST00000507142 PTPN23Q9H3S7 1636 aa12.21□□□□□ -0.45
NEK1-203ENST00000507142 ATP10AO60312 1499 aa12.21□□□□□ -0.45
NEK1-203ENST00000507142 UHRF1BP1LA0JNW5 1464 aa12.21□□□□□ -0.45
NEK1-203ENST00000507142 CABP1Q9NZU7 370 aa12.21□□□□□ -0.45
NEK1-203ENST00000507142 G3V3G9 751 aa12.21□□□□□ -0.46
NEK1-203ENST00000507142 FOXO3O43524 673 aa12.21□□□□□ -0.46
NEK1-203ENST00000507142 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.46
NEK1-203ENST00000507142 NBPF1Q3BBV0 1214 aa12.2□□□□□ -0.46
NEK1-203ENST00000507142 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
NEK1-203ENST00000507142 CHMP4AQ9BY43 222 aa12.2□□□□□ -0.46
NEK1-203ENST00000507142 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
NEK1-203ENST00000507142 STK31Q9BXU1 1019 aa12.19□□□□□ -0.46
NEK1-203ENST00000507142 CNTLNQ9NXG0 1405 aa12.19□□□□□ -0.46
NEK1-203ENST00000507142 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
NEK1-203ENST00000507142 CCDC146Q8IYE0 955 aa12.18□□□□□ -0.46
NEK1-203ENST00000507142 NCOA1Q15788 1441 aa12.18□□□□□ -0.46
NEK1-203ENST00000507142 NUDT16Q96DE0 195 aaKnown RBP12.17□□□□□ -0.46
NEK1-203ENST00000507142 PHF8Q9UPP1 1060 aa12.17□□□□□ -0.46
NEK1-203ENST00000507142 DIAPH1O60610 1272 aaKnown RBP12.17□□□□□ -0.46
NEK1-203ENST00000507142 PPP1R1BQ9UD71 204 aaPredicted RBP12.17□□□□□ -0.46
NEK1-203ENST00000507142 CHMP3Q9Y3E7 222 aa12.16□□□□□ -0.46
NEK1-203ENST00000507142 NGEFQ8N5V2 710 aa12.16□□□□□ -0.46
NEK1-203ENST00000507142 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
NEK1-203ENST00000507142 NEO1Q92859 1461 aa12.16□□□□□ -0.46
NEK1-203ENST00000507142 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
NEK1-203ENST00000507142 TSPOAP1O95153 1857 aa12.14□□□□□ -0.47
NEK1-203ENST00000507142 TAF7LQ5H9L4 462 aa12.14□□□□□ -0.47
NEK1-203ENST00000507142 TATP17735 454 aaPredicted RBP12.14□□□□□ -0.47
NEK1-203ENST00000507142 KRT28Q7Z3Y7 464 aa12.14□□□□□ -0.47
NEK1-203ENST00000507142 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
NEK1-203ENST00000507142 CCDC136Q96JN2 1154 aa12.13□□□□□ -0.47
NEK1-203ENST00000507142 ZFYVE16Q7Z3T8 1539 aa12.13□□□□□ -0.47
NEK1-203ENST00000507142 SMG6Q86US8 1419 aaKnown RBP12.13□□□□□ -0.47
NEK1-203ENST00000507142 SLC12A5Q9H2X9 1139 aa12.13□□□□□ -0.47
NEK1-203ENST00000507142 CHMP4BQ9H444 224 aaKnown RBP12.13□□□□□ -0.47
NEK1-203ENST00000507142 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
NEK1-203ENST00000507142 FKBP8Q14318 412 aa12.13□□□□□ -0.47
NEK1-203ENST00000507142 RRP7AQ9Y3A4 280 aaKnown RBP12.13□□□□□ -0.47
NEK1-203ENST00000507142 MAP3K1Q13233 1512 aa12.12□□□□□ -0.47
NEK1-203ENST00000507142 DUOX2Q9NRD8 1548 aa12.12□□□□□ -0.47
NEK1-203ENST00000507142 NAIPQ13075 1403 aa12.12□□□□□ -0.47
NEK1-203ENST00000507142 MS4A1P11836 297 aa12.12□□□□□ -0.47
NEK1-203ENST00000507142 HMOX1P09601 288 aa12.11□□□□□ -0.47
NEK1-203ENST00000507142 C8orf37Q96NL8 207 aa12.11□□□□□ -0.47
NEK1-203ENST00000507142 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
NEK1-203ENST00000507142 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
NEK1-203ENST00000507142 IRX6P78412 446 aaPredicted RBP12.11□□□□□ -0.47
NEK1-203ENST00000507142 NOS1P29475 1434 aa12.11□□□□□ -0.47
NEK1-203ENST00000507142 ITSN2Q9NZM3 1697 aa12.11□□□□□ -0.47
NEK1-203ENST00000507142 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
NEK1-203ENST00000507142 UPF2Q9HAU5 1272 aaKnown RBP12.1□□□□□ -0.47
NEK1-203ENST00000507142 ERCC6L2Q5T890 1561 aa12.1□□□□□ -0.47
NEK1-203ENST00000507142 PLEKHO1Q53GL0 409 aaPredicted RBP12.09□□□□□ -0.47
NEK1-203ENST00000507142 KCNH5Q8NCM2 988 aa12.09□□□□□ -0.47
NEK1-203ENST00000507142 C19orf44Q9H6X5 657 aa12.09□□□□□ -0.47
NEK1-203ENST00000507142 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
NEK1-203ENST00000507142 SLC4A10Q6U841 1118 aa12.08□□□□□ -0.48
NEK1-203ENST00000507142 WASLO00401 505 aaPredicted RBP12.08□□□□□ -0.48
NEK1-203ENST00000507142 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
NEK1-203ENST00000507142 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
NEK1-203ENST00000507142 ELL2O00472 640 aaPredicted RBP12.07□□□□□ -0.48
NEK1-203ENST00000507142 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
NEK1-203ENST00000507142 KDM6BO15054 1643 aa12.06□□□□□ -0.48
NEK1-203ENST00000507142 RIMBP3CA6NJZ7 1639 aa12.06□□□□□ -0.48
NEK1-203ENST00000507142 RIMBP3BA6NNM3 1639 aa12.06□□□□□ -0.48
NEK1-203ENST00000507142 RIMBP3Q9UFD9 1639 aa12.06□□□□□ -0.48
NEK1-203ENST00000507142 NPHP3Q7Z494 1330 aa12.06□□□□□ -0.48
NEK1-203ENST00000507142 NECTIN2Q92692 538 aa12.06□□□□□ -0.48
NEK1-203ENST00000507142 SPG7Q9UQ90 795 aa12.06□□□□□ -0.48
NEK1-203ENST00000507142 FRAT2O75474 233 aaPredicted RBP12.05□□□□□ -0.48
NEK1-203ENST00000507142 GORABQ5T7V8 394 aa12.05□□□□□ -0.48
NEK1-203ENST00000507142 KCNA6P17658 529 aa12.05□□□□□ -0.48
NEK1-203ENST00000507142 MYBBP1AQ9BQG0 1328 aaKnown RBP12.04□□□□□ -0.48
NEK1-203ENST00000507142 ATP7AQ04656 1500 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms