RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 CHGAP10645 457 aaKnown RBP30.39■■■□□ 2.46
RNF4-207ENST00000506706 NRXN1Q9ULB1 1477 aa30.39■■■□□ 2.45
RNF4-207ENST00000506706 HNRNPUQ00839 825 aaKnown RBP eCLIP30.38■■■□□ 2.45
RNF4-207ENST00000506706 EIF3AQ14152 1382 aaKnown RBP30.36■■■□□ 2.45
RNF4-207ENST00000506706 KTN1Q86UP2 1357 aaKnown RBP30.36■■■□□ 2.45
RNF4-207ENST00000506706 KIF13AQ9H1H9 1805 aa30.35■■■□□ 2.45
RNF4-207ENST00000506706 PIK3C2BO00750 1634 aa30.35■■■□□ 2.45
RNF4-207ENST00000506706 PPLO60437 1756 aa30.34■■■□□ 2.45
RNF4-207ENST00000506706 REREQ9P2R6 1566 aa30.34■■■□□ 2.45
RNF4-207ENST00000506706 CNGB1Q14028 1251 aaPredicted RBP30.34■■■□□ 2.45
RNF4-207ENST00000506706 SYNMO15061 1565 aa30.34■■■□□ 2.45
RNF4-207ENST00000506706 CFAP70Q5T0N1 1121 aa30.34■■■□□ 2.45
RNF4-207ENST00000506706 RPGRIP1LQ68CZ1 1315 aa30.33■■■□□ 2.45
RNF4-207ENST00000506706 FAM9BQ8IZU0 186 aa30.33■■■□□ 2.45
RNF4-207ENST00000506706 RALBP1Q15311 655 aa30.3■■■□□ 2.44
RNF4-207ENST00000506706 AGLP35573 1532 aa30.28■■■□□ 2.44
RNF4-207ENST00000506706 CDCA8Q53HL2 280 aa30.27■■■□□ 2.44
RNF4-207ENST00000506706 PER1O15534 1290 aaPredicted RBP30.26■■■□□ 2.43
RNF4-207ENST00000506706 SETBP1Q9Y6X0 1596 aa30.26■■■□□ 2.43
RNF4-207ENST00000506706 PIK3C2GO75747 1445 aa30.25■■■□□ 2.43
RNF4-207ENST00000506706 PREX1Q8TCU6 1659 aa30.24■■■□□ 2.43
RNF4-207ENST00000506706 MYBBP1AQ9BQG0 1328 aaKnown RBP30.24■■■□□ 2.43
RNF4-207ENST00000506706 SLC52A1Q9NWF4 448 aa30.24■■■□□ 2.43
RNF4-207ENST00000506706 SLC24A1O60721 1099 aa30.23■■■□□ 2.43
RNF4-207ENST00000506706 PANK3Q9H999 370 aa30.23■■■□□ 2.43
RNF4-207ENST00000506706 PPP6R1Q9UPN7 881 aa30.22■■■□□ 2.43
RNF4-207ENST00000506706 IDI1Q13907 227 aa30.2■■■□□ 2.43
RNF4-207ENST00000506706 TMC1Q8TDI8 760 aa30.19■■■□□ 2.42
RNF4-207ENST00000506706 C14orf93Q9H972 538 aaKnown RBP30.19■■■□□ 2.42
RNF4-207ENST00000506706 PARD3Q8TEW0 1356 aa30.19■■■□□ 2.42
RNF4-207ENST00000506706 SUPT16HQ9Y5B9 1047 aaKnown RBP30.19■■■□□ 2.42
RNF4-207ENST00000506706 BRD4O60885 1362 aaPredicted RBP30.19■■■□□ 2.42
RNF4-207ENST00000506706 NEXMIFQ5QGS0 1516 aa30.18■■■□□ 2.42
RNF4-207ENST00000506706 MYO3AQ8NEV4 1616 aa30.17■■■□□ 2.42
RNF4-207ENST00000506706 VGFO15240 615 aaPredicted RBP30.16■■■□□ 2.42
RNF4-207ENST00000506706 ARHGEF40Q8TER5 1519 aa30.16■■■□□ 2.42
RNF4-207ENST00000506706 ZBED9Q6R2W3 1325 aa30.14■■■□□ 2.42
RNF4-207ENST00000506706 KDM5AP29375 1690 aaKnown RBP30.14■■■□□ 2.42
RNF4-207ENST00000506706 PNISRQ8TF01 805 aaKnown RBP30.13■■■□□ 2.41
RNF4-207ENST00000506706 ADGRB1O14514 1584 aa30.12■■■□□ 2.41
RNF4-207ENST00000506706 ERVK-7P63135 1459 aa30.12■■■□□ 2.41
RNF4-207ENST00000506706 CLTCQ00610 1675 aaKnown RBP30.11■■■□□ 2.41
RNF4-207ENST00000506706 SBNO2Q9Y2G9 1366 aa30.11■■■□□ 2.41
RNF4-207ENST00000506706 TMEM131LA2VDJ0 1609 aa30.1■■■□□ 2.41
RNF4-207ENST00000506706 NLRP13Q86W25 1043 aa30.1■■■□□ 2.41
RNF4-207ENST00000506706 ZFYVE9O95405 1425 aa30.09■■■□□ 2.41
RNF4-207ENST00000506706 MYOM1P52179 1685 aa30.08■■■□□ 2.41
RNF4-207ENST00000506706 FBXO31Q5XUX0 539 aaPredicted RBP30.08■■■□□ 2.41
RNF4-207ENST00000506706 MYO5BQ9ULV0 1848 aa30.08■■■□□ 2.41
RNF4-207ENST00000506706 CENPJQ9HC77 1338 aaPredicted RBP30.07■■■□□ 2.4
RNF4-207ENST00000506706 CC2D1BQ5T0F9 858 aaKnown RBP30.07■■■□□ 2.4
RNF4-207ENST00000506706 NUTM2DQ5VT03 806 aaPredicted RBP30.05■■■□□ 2.4
RNF4-207ENST00000506706 NEFLP07196 543 aa30.05■■■□□ 2.4
RNF4-207ENST00000506706 TRAK1Q9UPV9 953 aa30.05■■■□□ 2.4
RNF4-207ENST00000506706 KNSTRNQ9Y448 316 aa30.05■■■□□ 2.4
RNF4-207ENST00000506706 TMEM132EQ6IEE7 984 aa30.03■■■□□ 2.4
RNF4-207ENST00000506706 LRPPRCP42704 1394 aaKnown RBP30.03■■■□□ 2.4
RNF4-207ENST00000506706 MLECQ14165 292 aa30.02■■■□□ 2.4
RNF4-207ENST00000506706 FKBP8Q14318 412 aa30.01■■■□□ 2.39
RNF4-207ENST00000506706 QRICH2Q9H0J4 1663 aa30.01■■■□□ 2.39
RNF4-207ENST00000506706 SPATA31D1Q6ZQQ2 1576 aa29.99■■■□□ 2.39
RNF4-207ENST00000506706 ASXL1Q8IXJ9 1541 aa29.97■■■□□ 2.39
RNF4-207ENST00000506706 AMER1Q5JTC6 1135 aaPredicted RBP29.95■■■□□ 2.39
RNF4-207ENST00000506706 STAG3Q9UJ98 1225 aa29.95■■■□□ 2.38
RNF4-207ENST00000506706 ARHGEF28Q8N1W1 1705 aaKnown RBP29.93■■■□□ 2.38
RNF4-207ENST00000506706 ESF1Q9H501 851 aaKnown RBP29.93■■■□□ 2.38
RNF4-207ENST00000506706 NPC1L1Q9UHC9 1359 aa29.93■■■□□ 2.38
RNF4-207ENST00000506706 ZMYM3Q14202 1370 aa29.87■■■□□ 2.37
RNF4-207ENST00000506706 A2ML1A8K2U0 1454 aa29.87■■■□□ 2.37
RNF4-207ENST00000506706 PPP2R1AP30153 589 aa29.84■■■□□ 2.37
RNF4-207ENST00000506706 PUS7Q96PZ0 661 aaKnown RBP29.83■■■□□ 2.37
RNF4-207ENST00000506706 INSRP06213 1382 aa29.83■■■□□ 2.37
RNF4-207ENST00000506706 SMG6Q86US8 1419 aaKnown RBP29.83■■■□□ 2.37
RNF4-207ENST00000506706 EVC2Q86UK5 1308 aa29.82■■■□□ 2.36
RNF4-207ENST00000506706 ALKQ9UM73 1620 aa29.81■■■□□ 2.36
RNF4-207ENST00000506706 CARD14Q9BXL6 1004 aa29.81■■■□□ 2.36
RNF4-207ENST00000506706 BCANQ96GW7 911 aa29.8■■■□□ 2.36
RNF4-207ENST00000506706 RIMS2Q9UQ26 1411 aa29.79■■■□□ 2.36
RNF4-207ENST00000506706 SENP3Q9H4L4 574 aaPredicted RBP29.79■■■□□ 2.36
RNF4-207ENST00000506706 STK26Q9P289 416 aa29.79■■■□□ 2.36
RNF4-207ENST00000506706 YTHDC2Q9H6S0 1430 aaKnown RBP29.78■■■□□ 2.36
RNF4-207ENST00000506706 TULP4Q9NRJ4 1543 aa29.78■■■□□ 2.36
RNF4-207ENST00000506706 PELP1Q8IZL8 1130 aaKnown RBP29.76■■■□□ 2.36
RNF4-207ENST00000506706 NUDCQ9Y266 331 aa29.76■■■□□ 2.36
RNF4-207ENST00000506706 PTPRMP28827 1452 aa29.75■■■□□ 2.35
RNF4-207ENST00000506706 SLC12A5Q9H2X9 1139 aa29.74■■■□□ 2.35
RNF4-207ENST00000506706 BLMP54132 1417 aaPredicted RBP29.74■■■□□ 2.35
RNF4-207ENST00000506706 SENP3-EIF4A1A0A087X0R7 540 aa29.72■■■□□ 2.35
RNF4-207ENST00000506706 TNRQ92752 1358 aa29.72■■■□□ 2.35
RNF4-207ENST00000506706 NSD3Q9BZ95 1437 aa29.71■■■□□ 2.35
RNF4-207ENST00000506706 SAFB2Q14151 953 aaKnown RBP eCLIP29.71■■■□□ 2.35
RNF4-207ENST00000506706 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.71■■■□□ 2.35
RNF4-207ENST00000506706 POGKQ9P215 609 aa29.68■■■□□ 2.34
RNF4-207ENST00000506706 PRAM1Q96QH2 718 aa29.68■■■□□ 2.34
RNF4-207ENST00000506706 USP32Q8NFA0 1604 aa29.66■■■□□ 2.34
RNF4-207ENST00000506706 SETD1AO15047 1707 aaKnown RBP29.66■■■□□ 2.34
RNF4-207ENST00000506706 WDR43Q15061 677 aaKnown RBP eCLIP29.66■■■□□ 2.34
RNF4-207ENST00000506706 ERICH6BQ5W0A0 696 aa29.66■■■□□ 2.34
RNF4-207ENST00000506706 CABP2Q9NPB3 220 aa29.66■■■□□ 2.34
RNF4-207ENST00000506706 HDGFP51858 240 aaKnown RBP29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms