RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 CFAP65Q6ZU64 1925 aaKnown RBP22.91■■□□□ 1.26
LIN54-204ENST00000505397 UGGT1Q9NYU2 1555 aa22.9■■□□□ 1.26
LIN54-204ENST00000505397 GPRASP1Q5JY77 1395 aa22.9■■□□□ 1.26
LIN54-204ENST00000505397 STAC3Q96MF2 364 aa22.9■■□□□ 1.26
LIN54-204ENST00000505397 ZC3H13Q5T200 1668 aaKnown RBP22.9■■□□□ 1.26
LIN54-204ENST00000505397 MADDQ8WXG6 1647 aa22.9■■□□□ 1.26
LIN54-204ENST00000505397 NPATQ14207 1427 aa22.9■■□□□ 1.26
LIN54-204ENST00000505397 LRPPRCP42704 1394 aaKnown RBP22.89■■□□□ 1.26
LIN54-204ENST00000505397 B4GALNT3Q6L9W6 998 aa22.88■■□□□ 1.25
LIN54-204ENST00000505397 NBPF1Q3BBV0 1214 aa22.87■■□□□ 1.25
LIN54-204ENST00000505397 BRD4O60885 1362 aaPredicted RBP22.86■■□□□ 1.25
LIN54-204ENST00000505397 RALBP1Q15311 655 aa22.85■■□□□ 1.25
LIN54-204ENST00000505397 TMC1Q8TDI8 760 aa22.84■■□□□ 1.25
LIN54-204ENST00000505397 MYBBP1AQ9BQG0 1328 aaKnown RBP22.84■■□□□ 1.25
LIN54-204ENST00000505397 MROH2AA6NES4 1674 aa22.83■■□□□ 1.25
LIN54-204ENST00000505397 CNGB1Q14028 1251 aaPredicted RBP22.81■■□□□ 1.24
LIN54-204ENST00000505397 REREQ9P2R6 1566 aa22.81■■□□□ 1.24
LIN54-204ENST00000505397 IFT172Q9UG01 1749 aa22.8■■□□□ 1.24
LIN54-204ENST00000505397 ADGRB3O60242 1522 aa22.8■■□□□ 1.24
LIN54-204ENST00000505397 MYOM2P54296 1465 aa22.79■■□□□ 1.24
LIN54-204ENST00000505397 SIGLEC1Q9BZZ2 1709 aa22.78■■□□□ 1.24
LIN54-204ENST00000505397 KIAA1210Q9ULL0 1709 aa22.78■■□□□ 1.24
LIN54-204ENST00000505397 ARHGAP31Q2M1Z3 1444 aa22.78■■□□□ 1.24
LIN54-204ENST00000505397 CHGAP10645 457 aaKnown RBP22.78■■□□□ 1.24
LIN54-204ENST00000505397 PARD3Q8TEW0 1356 aa22.77■■□□□ 1.24
LIN54-204ENST00000505397 NOS1P29475 1434 aa22.76■■□□□ 1.23
LIN54-204ENST00000505397 IQGAP1P46940 1657 aa22.75■■□□□ 1.23
LIN54-204ENST00000505397 AGLP35573 1532 aa22.74■■□□□ 1.23
LIN54-204ENST00000505397 ARHGEF40Q8TER5 1519 aa22.74■■□□□ 1.23
LIN54-204ENST00000505397 COL17A1Q9UMD9 1497 aaPredicted RBP22.73■■□□□ 1.23
LIN54-204ENST00000505397 PER1O15534 1290 aaPredicted RBP22.73■■□□□ 1.23
LIN54-204ENST00000505397 SYNMO15061 1565 aa22.73■■□□□ 1.23
LIN54-204ENST00000505397 PIK3C2BO00750 1634 aa22.73■■□□□ 1.23
LIN54-204ENST00000505397 PPLO60437 1756 aa22.72■■□□□ 1.23
LIN54-204ENST00000505397 PREX1Q8TCU6 1659 aa22.7■■□□□ 1.23
LIN54-204ENST00000505397 NLRP13Q86W25 1043 aa22.7■■□□□ 1.22
LIN54-204ENST00000505397 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
LIN54-204ENST00000505397 TESK2Q96S53 571 aa22.69■■□□□ 1.22
LIN54-204ENST00000505397 ADGRF5Q8IZF2 1346 aa22.68■■□□□ 1.22
LIN54-204ENST00000505397 EIF3AQ14152 1382 aaKnown RBP22.68■■□□□ 1.22
LIN54-204ENST00000505397 NRXN1Q9ULB1 1477 aa22.67■■□□□ 1.22
LIN54-204ENST00000505397 TMF1P82094 1093 aa22.67■■□□□ 1.22
LIN54-204ENST00000505397 INSRP06213 1382 aa22.66■■□□□ 1.22
LIN54-204ENST00000505397 PPP6R1Q9UPN7 881 aa22.66■■□□□ 1.22
LIN54-204ENST00000505397 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
LIN54-204ENST00000505397 CCDC136Q96JN2 1154 aa22.66■■□□□ 1.22
LIN54-204ENST00000505397 DISP3Q9P2K9 1392 aa22.65■■□□□ 1.22
LIN54-204ENST00000505397 CLTCQ00610 1675 aaKnown RBP22.64■■□□□ 1.22
LIN54-204ENST00000505397 SLC52A1Q9NWF4 448 aa22.64■■□□□ 1.22
LIN54-204ENST00000505397 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.21
LIN54-204ENST00000505397 SENP3-EIF4A1A0A087X0R7 540 aa22.63■■□□□ 1.21
LIN54-204ENST00000505397 PDE3BQ13370 1112 aa22.62■■□□□ 1.21
LIN54-204ENST00000505397 PIK3C2GO75747 1445 aa22.6■■□□□ 1.21
LIN54-204ENST00000505397 RRP1P56182 461 aaKnown RBP22.59■■□□□ 1.21
LIN54-204ENST00000505397 IDI1Q13907 227 aa22.59■■□□□ 1.21
LIN54-204ENST00000505397 MLECQ14165 292 aa22.59■■□□□ 1.21
LIN54-204ENST00000505397 SETBP1Q9Y6X0 1596 aa22.59■■□□□ 1.21
LIN54-204ENST00000505397 ERVK-7P63135 1459 aa22.59■■□□□ 1.21
LIN54-204ENST00000505397 MYO5BQ9ULV0 1848 aa22.58■■□□□ 1.21
LIN54-204ENST00000505397 NEXMIFQ5QGS0 1516 aa22.58■■□□□ 1.21
LIN54-204ENST00000505397 BLMP54132 1417 aaPredicted RBP22.58■■□□□ 1.2
LIN54-204ENST00000505397 ERICH6Q7L0X2 663 aa22.58■■□□□ 1.2
LIN54-204ENST00000505397 CDCA8Q53HL2 280 aa22.56■■□□□ 1.2
LIN54-204ENST00000505397 VGFO15240 615 aaPredicted RBP22.56■■□□□ 1.2
LIN54-204ENST00000505397 ESF1Q9H501 851 aaKnown RBP22.55■■□□□ 1.2
LIN54-204ENST00000505397 RCAN3Q9UKA8 241 aa22.55■■□□□ 1.2
LIN54-204ENST00000505397 TMEM131LA2VDJ0 1609 aa22.55■■□□□ 1.2
LIN54-204ENST00000505397 PANK3Q9H999 370 aa22.55■■□□□ 1.2
LIN54-204ENST00000505397 FBXO31Q5XUX0 539 aaPredicted RBP22.54■■□□□ 1.2
LIN54-204ENST00000505397 SLC24A1O60721 1099 aa22.53■■□□□ 1.2
LIN54-204ENST00000505397 C14orf93Q9H972 538 aaKnown RBP22.53■■□□□ 1.2
LIN54-204ENST00000505397 MYO3AQ8NEV4 1616 aa22.52■■□□□ 1.2
LIN54-204ENST00000505397 SPATA31D1Q6ZQQ2 1576 aa22.51■■□□□ 1.19
LIN54-204ENST00000505397 KDM5AP29375 1690 aaKnown RBP22.51■■□□□ 1.19
LIN54-204ENST00000505397 CC2D1BQ5T0F9 858 aaKnown RBP22.5■■□□□ 1.19
LIN54-204ENST00000505397 NUTM2DQ5VT03 806 aaPredicted RBP22.5■■□□□ 1.19
LIN54-204ENST00000505397 STAG3Q9UJ98 1225 aa22.5■■□□□ 1.19
LIN54-204ENST00000505397 ADGRB1O14514 1584 aa22.49■■□□□ 1.19
LIN54-204ENST00000505397 ZFYVE9O95405 1425 aa22.49■■□□□ 1.19
LIN54-204ENST00000505397 EXOC6Q8TAG9 804 aa22.48■■□□□ 1.19
LIN54-204ENST00000505397 TRHP20396 242 aaPredicted RBP22.47■■□□□ 1.19
LIN54-204ENST00000505397 CDCA7LQ96GN5 454 aa22.45■■□□□ 1.19
LIN54-204ENST00000505397 NOP58Q9Y2X3 529 aaKnown RBP22.45■■□□□ 1.19
LIN54-204ENST00000505397 CENPJQ9HC77 1338 aaPredicted RBP22.45■■□□□ 1.18
LIN54-204ENST00000505397 SALL2Q9Y467 1007 aaPredicted RBP22.45■■□□□ 1.18
LIN54-204ENST00000505397 TRAK1Q9UPV9 953 aa22.44■■□□□ 1.18
LIN54-204ENST00000505397 SBNO2Q9Y2G9 1366 aa22.44■■□□□ 1.18
LIN54-204ENST00000505397 QRICH2Q9H0J4 1663 aa22.44■■□□□ 1.18
LIN54-204ENST00000505397 TMEM132EQ6IEE7 984 aa22.43■■□□□ 1.18
LIN54-204ENST00000505397 MYOM1P52179 1685 aa22.43■■□□□ 1.18
LIN54-204ENST00000505397 ZMYM3Q14202 1370 aa22.43■■□□□ 1.18
LIN54-204ENST00000505397 ARHGEF28Q8N1W1 1705 aaKnown RBP22.4■■□□□ 1.18
LIN54-204ENST00000505397 IPO9Q96P70 1041 aaKnown RBP22.39■■□□□ 1.18
LIN54-204ENST00000505397 TCERG1O14776 1098 aaKnown RBP22.38■■□□□ 1.17
LIN54-204ENST00000505397 PAK3O75914 559 aaPredicted RBP22.38■■□□□ 1.17
LIN54-204ENST00000505397 A2ML1A8K2U0 1454 aa22.38■■□□□ 1.17
LIN54-204ENST00000505397 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
LIN54-204ENST00000505397 ANP32AP39687 249 aaKnown RBP22.37■■□□□ 1.17
LIN54-204ENST00000505397 KNSTRNQ9Y448 316 aa22.37■■□□□ 1.17
LIN54-204ENST00000505397 PPP2R1AP30153 589 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms