RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ZNF326Q5BKZ1 582 aaKnown RBP14.28□□□□□ -0.12
DDX41-203ENST00000504781 PRAG1Q86YV5 1406 aa14.27□□□□□ -0.12
DDX41-203ENST00000504781 VGFO15240 615 aaPredicted RBP14.27□□□□□ -0.13
DDX41-203ENST00000504781 HSPA5P11021 654 aaKnown RBP14.27□□□□□ -0.13
DDX41-203ENST00000504781 ZNF142P52746 1687 aaPredicted RBP14.26□□□□□ -0.13
DDX41-203ENST00000504781 CHGAP10645 457 aaKnown RBP14.26□□□□□ -0.13
DDX41-203ENST00000504781 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
DDX41-203ENST00000504781 THEMISQ8N1K5 641 aaPredicted RBP14.25□□□□□ -0.13
DDX41-203ENST00000504781 CARD11Q9BXL7 1154 aa14.25□□□□□ -0.13
DDX41-203ENST00000504781 RALGAPBQ86X10 1494 aa14.25□□□□□ -0.13
DDX41-203ENST00000504781 PIK3C2BO00750 1634 aa14.24□□□□□ -0.13
DDX41-203ENST00000504781 ANKLE2Q86XL3 938 aa14.24□□□□□ -0.13
DDX41-203ENST00000504781 UBAP1LF5GYI3 381 aa14.23□□□□□ -0.13
DDX41-203ENST00000504781 HDGFP51858 240 aaKnown RBP14.23□□□□□ -0.13
DDX41-203ENST00000504781 ERVK-7P63135 1459 aa14.23□□□□□ -0.13
DDX41-203ENST00000504781 GPRASP1Q5JY77 1395 aa14.22□□□□□ -0.13
DDX41-203ENST00000504781 SYNMO15061 1565 aa14.22□□□□□ -0.13
DDX41-203ENST00000504781 SPATA31D1Q6ZQQ2 1576 aa14.22□□□□□ -0.13
DDX41-203ENST00000504781 ROCK2O75116 1388 aaKnown RBP14.22□□□□□ -0.13
DDX41-203ENST00000504781 SLC24A1O60721 1099 aa14.21□□□□□ -0.13
DDX41-203ENST00000504781 NBPF1Q3BBV0 1214 aa14.21□□□□□ -0.13
DDX41-203ENST00000504781 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.13
DDX41-203ENST00000504781 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
DDX41-203ENST00000504781 UGGT1Q9NYU2 1555 aa14.21□□□□□ -0.14
DDX41-203ENST00000504781 MYOM2P54296 1465 aa14.2□□□□□ -0.14
DDX41-203ENST00000504781 ZFYVE9O95405 1425 aa14.2□□□□□ -0.14
DDX41-203ENST00000504781 ADGRB3O60242 1522 aa14.2□□□□□ -0.14
DDX41-203ENST00000504781 NLRP1Q9C000 1473 aa14.19□□□□□ -0.14
DDX41-203ENST00000504781 C14orf93Q9H972 538 aaKnown RBP14.19□□□□□ -0.14
DDX41-203ENST00000504781 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
DDX41-203ENST00000504781 ADGRF5Q8IZF2 1346 aa14.18□□□□□ -0.14
DDX41-203ENST00000504781 USP47Q96K76 1375 aa14.18□□□□□ -0.14
DDX41-203ENST00000504781 IQSEC2Q5JU85 1478 aa14.18□□□□□ -0.14
DDX41-203ENST00000504781 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
DDX41-203ENST00000504781 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.17□□□□□ -0.14
DDX41-203ENST00000504781 KIAA1210Q9ULL0 1709 aa14.17□□□□□ -0.14
DDX41-203ENST00000504781 DISP3Q9P2K9 1392 aa14.17□□□□□ -0.14
DDX41-203ENST00000504781 NRXN1Q9ULB1 1477 aa14.17□□□□□ -0.14
DDX41-203ENST00000504781 TMEM131LA2VDJ0 1609 aa14.16□□□□□ -0.14
DDX41-203ENST00000504781 LAMC1P11047 1609 aa14.16□□□□□ -0.14
DDX41-203ENST00000504781 IFT172Q9UG01 1749 aa14.15□□□□□ -0.14
DDX41-203ENST00000504781 ST20-MTHFSA0A0A6YYL1 179 aa14.15□□□□□ -0.14
DDX41-203ENST00000504781 DDX10Q13206 875 aaKnown RBP14.15□□□□□ -0.14
DDX41-203ENST00000504781 POLR1AO95602 1720 aaPredicted RBP14.15□□□□□ -0.14
DDX41-203ENST00000504781 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
DDX41-203ENST00000504781 PPLO60437 1756 aa14.14□□□□□ -0.15
DDX41-203ENST00000504781 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
DDX41-203ENST00000504781 CFAP70Q5T0N1 1121 aa14.14□□□□□ -0.15
DDX41-203ENST00000504781 TXNDC2Q86VQ3 553 aa14.12□□□□□ -0.15
DDX41-203ENST00000504781 WASHC2AQ641Q2 1341 aa14.12□□□□□ -0.15
DDX41-203ENST00000504781 KDM5AP29375 1690 aaKnown RBP14.11□□□□□ -0.15
DDX41-203ENST00000504781 C11orf95C9JLR9 678 aaPredicted RBP14.11□□□□□ -0.15
DDX41-203ENST00000504781 TOM1O60784 492 aa14.11□□□□□ -0.15
DDX41-203ENST00000504781 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
DDX41-203ENST00000504781 NEXMIFQ5QGS0 1516 aa14.1□□□□□ -0.15
DDX41-203ENST00000504781 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
DDX41-203ENST00000504781 EID1Q9Y6B2 187 aa14.09□□□□□ -0.15
DDX41-203ENST00000504781 MED14O60244 1454 aa14.09□□□□□ -0.15
DDX41-203ENST00000504781 SCAF11Q99590 1463 aaKnown RBP14.09□□□□□ -0.15
DDX41-203ENST00000504781 CPS1P31327 1500 aa14.09□□□□□ -0.15
DDX41-203ENST00000504781 SETBP1Q9Y6X0 1596 aa14.09□□□□□ -0.15
DDX41-203ENST00000504781 LTKP29376 864 aa14.08□□□□□ -0.16
DDX41-203ENST00000504781 TMF1P82094 1093 aa14.08□□□□□ -0.16
DDX41-203ENST00000504781 CDCA8Q53HL2 280 aa14.08□□□□□ -0.16
DDX41-203ENST00000504781 TESK2Q96S53 571 aa14.08□□□□□ -0.16
DDX41-203ENST00000504781 MYO5BQ9ULV0 1848 aa14.08□□□□□ -0.16
DDX41-203ENST00000504781 EIF3AQ14152 1382 aaKnown RBP14.08□□□□□ -0.16
DDX41-203ENST00000504781 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
DDX41-203ENST00000504781 MIER1Q8N108 512 aa14.07□□□□□ -0.16
DDX41-203ENST00000504781 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
DDX41-203ENST00000504781 RIMS2Q9UQ26 1411 aa14.07□□□□□ -0.16
DDX41-203ENST00000504781 NUTM2DQ5VT03 806 aaPredicted RBP14.06□□□□□ -0.16
DDX41-203ENST00000504781 ILDR2Q71H61 639 aa14.06□□□□□ -0.16
DDX41-203ENST00000504781 UBR1Q8IWV7 1749 aa14.06□□□□□ -0.16
DDX41-203ENST00000504781 HSPA1LP34931 641 aa14.05□□□□□ -0.16
DDX41-203ENST00000504781 TMEM2Q9UHN6 1383 aa14.05□□□□□ -0.16
DDX41-203ENST00000504781 BCANQ96GW7 911 aa14.04□□□□□ -0.16
DDX41-203ENST00000504781 TMEM132EQ6IEE7 984 aa14.03□□□□□ -0.16
DDX41-203ENST00000504781 ANP32CO43423 234 aa14.02□□□□□ -0.17
DDX41-203ENST00000504781 SIRT1Q96EB6 747 aa14.02□□□□□ -0.17
DDX41-203ENST00000504781 PUS7Q96PZ0 661 aaKnown RBP14.02□□□□□ -0.17
DDX41-203ENST00000504781 TRAK1Q9UPV9 953 aa14.02□□□□□ -0.17
DDX41-203ENST00000504781 ADGRB1O14514 1584 aa14□□□□□ -0.17
DDX41-203ENST00000504781 SLIT1O75093 1534 aa14□□□□□ -0.17
DDX41-203ENST00000504781 ARHGAP23Q9P227 1491 aa14□□□□□ -0.17
DDX41-203ENST00000504781 SBNO2Q9Y2G9 1366 aa14□□□□□ -0.17
DDX41-203ENST00000504781 SLC26A8Q96RN1 970 aa14□□□□□ -0.17
DDX41-203ENST00000504781 ALKQ9UM73 1620 aa14□□□□□ -0.17
DDX41-203ENST00000504781 LRRC7Q96NW7 1537 aa14□□□□□ -0.17
DDX41-203ENST00000504781 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
DDX41-203ENST00000504781 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
DDX41-203ENST00000504781 TBX22Q9Y458 520 aa13.98□□□□□ -0.17
DDX41-203ENST00000504781 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
DDX41-203ENST00000504781 ABCC11Q96J66 1382 aa13.96□□□□□ -0.17
DDX41-203ENST00000504781 CCER2I3L3R5 266 aa13.96□□□□□ -0.17
DDX41-203ENST00000504781 RBM33Q96EV2 1170 aaKnown RBP13.96□□□□□ -0.17
DDX41-203ENST00000504781 POLR3GLQ9BT43 218 aa13.96□□□□□ -0.17
DDX41-203ENST00000504781 SOCS7O14512 581 aa13.95□□□□□ -0.18
DDX41-203ENST00000504781 PROSER2Q86WR7 435 aaPredicted RBP13.95□□□□□ -0.18
DDX41-203ENST00000504781 YTHDC2Q9H6S0 1430 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms