RNA–Protein interactions for RNA: ENST00000504110.1

C4orf3-202, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-202ENST00000504110 ZFYVE9O95405 1425 aa22.83■■□□□ 1.25
C4orf3-202ENST00000504110 RIMS2Q9UQ26 1411 aa22.83■■□□□ 1.25
C4orf3-202ENST00000504110 NEXMIFQ5QGS0 1516 aa22.83■■□□□ 1.25
C4orf3-202ENST00000504110 PPLO60437 1756 aa22.83■■□□□ 1.24
C4orf3-202ENST00000504110 IFT172Q9UG01 1749 aa22.82■■□□□ 1.24
C4orf3-202ENST00000504110 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.81■■□□□ 1.24
C4orf3-202ENST00000504110 EID1Q9Y6B2 187 aa22.81■■□□□ 1.24
C4orf3-202ENST00000504110 ANKLE2Q86XL3 938 aa22.8■■□□□ 1.24
C4orf3-202ENST00000504110 POLR1AO95602 1720 aaPredicted RBP22.79■■□□□ 1.24
C4orf3-202ENST00000504110 SCAF11Q99590 1463 aaKnown RBP22.79■■□□□ 1.24
C4orf3-202ENST00000504110 TXNDC2Q86VQ3 553 aa22.79■■□□□ 1.24
C4orf3-202ENST00000504110 TONSLQ96HA7 1378 aa22.78■■□□□ 1.24
C4orf3-202ENST00000504110 LTKP29376 864 aa22.77■■□□□ 1.24
C4orf3-202ENST00000504110 STAC3Q96MF2 364 aa22.77■■□□□ 1.24
C4orf3-202ENST00000504110 VGFO15240 615 aaPredicted RBP22.76■■□□□ 1.23
C4orf3-202ENST00000504110 MYOM2P54296 1465 aa22.75■■□□□ 1.23
C4orf3-202ENST00000504110 L3MBTL2Q969R5 705 aa22.75■■□□□ 1.23
C4orf3-202ENST00000504110 TIMELESSQ9UNS1 1208 aa22.75■■□□□ 1.23
C4orf3-202ENST00000504110 STRCQ7RTU9 1775 aa22.74■■□□□ 1.23
C4orf3-202ENST00000504110 PPP1R15AO75807 674 aaPredicted RBP22.74■■□□□ 1.23
C4orf3-202ENST00000504110 NUTM2DQ5VT03 806 aaPredicted RBP22.74■■□□□ 1.23
C4orf3-202ENST00000504110 DCAF11Q8TEB1 546 aa22.74■■□□□ 1.23
C4orf3-202ENST00000504110 NCKAP5LQ9HCH0 1330 aa22.73■■□□□ 1.23
C4orf3-202ENST00000504110 MED14O60244 1454 aa22.73■■□□□ 1.23
C4orf3-202ENST00000504110 PLEKHG1Q9ULL1 1385 aa22.72■■□□□ 1.23
C4orf3-202ENST00000504110 KDM2AQ9Y2K7 1162 aa22.7■■□□□ 1.22
C4orf3-202ENST00000504110 NPHP4O75161 1426 aaPredicted RBP22.7■■□□□ 1.22
C4orf3-202ENST00000504110 NRXN1Q9ULB1 1477 aa22.69■■□□□ 1.22
C4orf3-202ENST00000504110 ADGRF5Q8IZF2 1346 aa22.69■■□□□ 1.22
C4orf3-202ENST00000504110 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
C4orf3-202ENST00000504110 SETBP1Q9Y6X0 1596 aa22.67■■□□□ 1.22
C4orf3-202ENST00000504110 PIK3C2GO75747 1445 aa22.65■■□□□ 1.22
C4orf3-202ENST00000504110 NRXN3Q9Y4C0 1643 aa22.64■■□□□ 1.22
C4orf3-202ENST00000504110 BCANQ96GW7 911 aa22.64■■□□□ 1.21
C4orf3-202ENST00000504110 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.21
C4orf3-202ENST00000504110 PRAG1Q86YV5 1406 aa22.63■■□□□ 1.21
C4orf3-202ENST00000504110 DIP2AQ14689 1571 aa22.63■■□□□ 1.21
C4orf3-202ENST00000504110 ADAMTS13Q76LX8 1427 aa22.62■■□□□ 1.21
C4orf3-202ENST00000504110 LAMC1P11047 1609 aa22.61■■□□□ 1.21
C4orf3-202ENST00000504110 ALKQ9UM73 1620 aa22.6■■□□□ 1.21
C4orf3-202ENST00000504110 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
C4orf3-202ENST00000504110 TBX22Q9Y458 520 aa22.59■■□□□ 1.21
C4orf3-202ENST00000504110 SETD1AO15047 1707 aaKnown RBP22.59■■□□□ 1.21
C4orf3-202ENST00000504110 KIAA1210Q9ULL0 1709 aa22.59■■□□□ 1.21
C4orf3-202ENST00000504110 SLC26A8Q96RN1 970 aa22.58■■□□□ 1.21
C4orf3-202ENST00000504110 C14orf93Q9H972 538 aaKnown RBP22.58■■□□□ 1.21
C4orf3-202ENST00000504110 CFAP70Q5T0N1 1121 aa22.56■■□□□ 1.2
C4orf3-202ENST00000504110 NBPF8Q3BBV2 869 aa22.55■■□□□ 1.2
C4orf3-202ENST00000504110 TRPM1Q7Z4N2 1603 aa22.55■■□□□ 1.2
C4orf3-202ENST00000504110 PIK3R4Q99570 1358 aa22.54■■□□□ 1.2
C4orf3-202ENST00000504110 METP08581 1390 aa22.5■■□□□ 1.19
C4orf3-202ENST00000504110 ASXL1Q8IXJ9 1541 aa22.5■■□□□ 1.19
C4orf3-202ENST00000504110 CHD2O14647 1828 aaKnown RBP22.5■■□□□ 1.19
C4orf3-202ENST00000504110 RALGAPBQ86X10 1494 aa22.49■■□□□ 1.19
C4orf3-202ENST00000504110 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
C4orf3-202ENST00000504110 ADGRB1O14514 1584 aa22.49■■□□□ 1.19
C4orf3-202ENST00000504110 TMEM132EQ6IEE7 984 aa22.47■■□□□ 1.19
C4orf3-202ENST00000504110 NBPF1Q3BBV0 1214 aa22.46■■□□□ 1.19
C4orf3-202ENST00000504110 PTPRUQ92729 1446 aa22.46■■□□□ 1.19
C4orf3-202ENST00000504110 NWD1Q149M9 1564 aa22.46■■□□□ 1.19
C4orf3-202ENST00000504110 KCNA6P17658 529 aa22.45■■□□□ 1.18
C4orf3-202ENST00000504110 FBXO41Q8TF61 875 aa22.45■■□□□ 1.18
C4orf3-202ENST00000504110 ROCK2O75116 1388 aaKnown RBP22.45■■□□□ 1.18
C4orf3-202ENST00000504110 LRPPRCP42704 1394 aaKnown RBP22.44■■□□□ 1.18
C4orf3-202ENST00000504110 GPRASP1Q5JY77 1395 aa22.44■■□□□ 1.18
C4orf3-202ENST00000504110 XRN1Q8IZH2 1706 aaKnown RBP22.44■■□□□ 1.18
C4orf3-202ENST00000504110 YTHDC2Q9H6S0 1430 aaKnown RBP22.44■■□□□ 1.18
C4orf3-202ENST00000504110 KNDC1Q76NI1 1749 aa22.43■■□□□ 1.18
C4orf3-202ENST00000504110 AMOTL2Q9Y2J4 779 aa22.43■■□□□ 1.18
C4orf3-202ENST00000504110 ABCC11Q96J66 1382 aa22.41■■□□□ 1.18
C4orf3-202ENST00000504110 STRCP1A6NGW2 1772 aa22.41■■□□□ 1.18
C4orf3-202ENST00000504110 ZNF335Q9H4Z2 1342 aaPredicted RBP22.41■■□□□ 1.18
C4orf3-202ENST00000504110 NKTRP30414 1462 aaKnown RBP22.4■■□□□ 1.18
C4orf3-202ENST00000504110 TECPR2O15040 1411 aa22.4■■□□□ 1.18
C4orf3-202ENST00000504110 CARD11Q9BXL7 1154 aa22.39■■□□□ 1.17
C4orf3-202ENST00000504110 STK26Q9P289 416 aa22.39■■□□□ 1.17
C4orf3-202ENST00000504110 CPS1P31327 1500 aa22.38■■□□□ 1.17
C4orf3-202ENST00000504110 DLC1Q96QB1 1528 aa22.38■■□□□ 1.17
C4orf3-202ENST00000504110 PTCH1Q13635 1447 aa22.37■■□□□ 1.17
C4orf3-202ENST00000504110 SIRT1Q96EB6 747 aa22.36■■□□□ 1.17
C4orf3-202ENST00000504110 TRAK1Q9UPV9 953 aa22.36■■□□□ 1.17
C4orf3-202ENST00000504110 LTBP4Q8N2S1 1624 aa22.35■■□□□ 1.17
C4orf3-202ENST00000504110 ARHGEF28Q8N1W1 1705 aaKnown RBP22.34■■□□□ 1.17
C4orf3-202ENST00000504110 FAM135BQ49AJ0 1406 aa22.33■■□□□ 1.17
C4orf3-202ENST00000504110 ROBO2Q9HCK4 1378 aa22.33■■□□□ 1.17
C4orf3-202ENST00000504110 EIF3AQ14152 1382 aaKnown RBP22.31■■□□□ 1.16
C4orf3-202ENST00000504110 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
C4orf3-202ENST00000504110 LRRC7Q96NW7 1537 aa22.3■■□□□ 1.16
C4orf3-202ENST00000504110 PRAM1Q96QH2 718 aa22.28■■□□□ 1.16
C4orf3-202ENST00000504110 POGKQ9P215 609 aa22.28■■□□□ 1.16
C4orf3-202ENST00000504110 NCOA3Q9Y6Q9 1424 aa22.28■■□□□ 1.16
C4orf3-202ENST00000504110 WAPLQ7Z5K2 1190 aa22.27■■□□□ 1.16
C4orf3-202ENST00000504110 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
C4orf3-202ENST00000504110 USP47Q96K76 1375 aa22.26■■□□□ 1.15
C4orf3-202ENST00000504110 PLEKHH1Q9ULM0 1364 aa22.26■■□□□ 1.15
C4orf3-202ENST00000504110 XIRP1Q702N8 1843 aaKnown RBP22.26■■□□□ 1.15
C4orf3-202ENST00000504110 CENPJQ9HC77 1338 aaPredicted RBP22.25■■□□□ 1.15
C4orf3-202ENST00000504110 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
C4orf3-202ENST00000504110 EIF4G2P78344 907 aaKnown RBP eCLIP22.23■■□□□ 1.15
C4orf3-202ENST00000504110 RBM33Q96EV2 1170 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms