RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 IFT172Q9UG01 1749 aa16.77■□□□□ 0.28
SCG5-209ENST00000498607 CEBPAP49715 358 aaPredicted RBP16.77■□□□□ 0.28
SCG5-209ENST00000498607 IDI1Q13907 227 aa16.77■□□□□ 0.28
SCG5-209ENST00000498607 NLRP1Q9C000 1473 aa16.77■□□□□ 0.28
SCG5-209ENST00000498607 PTPRMP28827 1452 aa16.76■□□□□ 0.27
SCG5-209ENST00000498607 MYO3AQ8NEV4 1616 aa16.75■□□□□ 0.27
SCG5-209ENST00000498607 PPP1R15AO75807 674 aaPredicted RBP16.75■□□□□ 0.27
SCG5-209ENST00000498607 RGL3Q3MIN7 710 aa16.74■□□□□ 0.27
SCG5-209ENST00000498607 SETD1BQ9UPS6 1966 aaKnown RBP16.74■□□□□ 0.27
SCG5-209ENST00000498607 PPLO60437 1756 aa16.74■□□□□ 0.27
SCG5-209ENST00000498607 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
SCG5-209ENST00000498607 UBR1Q8IWV7 1749 aa16.73■□□□□ 0.27
SCG5-209ENST00000498607 UHRF1BP1Q6BDS2 1440 aa16.72■□□□□ 0.27
SCG5-209ENST00000498607 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
SCG5-209ENST00000498607 MYOM2P54296 1465 aa16.72■□□□□ 0.27
SCG5-209ENST00000498607 ZNF142P52746 1687 aaPredicted RBP16.72■□□□□ 0.27
SCG5-209ENST00000498607 STAC3Q96MF2 364 aa16.71■□□□□ 0.27
SCG5-209ENST00000498607 RPGRIP1LQ68CZ1 1315 aa16.7■□□□□ 0.26
SCG5-209ENST00000498607 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
SCG5-209ENST00000498607 DCAF11Q8TEB1 546 aa16.7■□□□□ 0.26
SCG5-209ENST00000498607 CEP170BQ9Y4F5 1589 aaPredicted RBP16.69■□□□□ 0.26
SCG5-209ENST00000498607 PRAG1Q86YV5 1406 aa16.69■□□□□ 0.26
SCG5-209ENST00000498607 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
SCG5-209ENST00000498607 STAG3Q9UJ98 1225 aa16.68■□□□□ 0.26
SCG5-209ENST00000498607 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
SCG5-209ENST00000498607 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
SCG5-209ENST00000498607 NRXN1Q9ULB1 1477 aa16.67■□□□□ 0.26
SCG5-209ENST00000498607 NBPF8Q3BBV2 869 aa16.66■□□□□ 0.26
SCG5-209ENST00000498607 TRPM1Q7Z4N2 1603 aa16.66■□□□□ 0.26
SCG5-209ENST00000498607 ZFYVE9O95405 1425 aa16.65■□□□□ 0.26
SCG5-209ENST00000498607 RALGAPBQ86X10 1494 aa16.65■□□□□ 0.26
SCG5-209ENST00000498607 RIMS2Q9UQ26 1411 aa16.64■□□□□ 0.25
SCG5-209ENST00000498607 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
SCG5-209ENST00000498607 KIAA1210Q9ULL0 1709 aa16.64■□□□□ 0.25
SCG5-209ENST00000498607 SLIT1O75093 1534 aa16.62■□□□□ 0.25
SCG5-209ENST00000498607 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
SCG5-209ENST00000498607 TMEM2Q9UHN6 1383 aa16.62■□□□□ 0.25
SCG5-209ENST00000498607 ARHGAP23Q9P227 1491 aa16.61■□□□□ 0.25
SCG5-209ENST00000498607 VGFO15240 615 aaPredicted RBP16.61■□□□□ 0.25
SCG5-209ENST00000498607 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
SCG5-209ENST00000498607 PIK3C2GO75747 1445 aa16.61■□□□□ 0.25
SCG5-209ENST00000498607 LAMC1P11047 1609 aa16.6■□□□□ 0.25
SCG5-209ENST00000498607 THEMISQ8N1K5 641 aaPredicted RBP16.59■□□□□ 0.25
SCG5-209ENST00000498607 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.59■□□□□ 0.25
SCG5-209ENST00000498607 GPRASP1Q5JY77 1395 aa16.57■□□□□ 0.24
SCG5-209ENST00000498607 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
SCG5-209ENST00000498607 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
SCG5-209ENST00000498607 SETBP1Q9Y6X0 1596 aa16.55■□□□□ 0.24
SCG5-209ENST00000498607 ROCK2O75116 1388 aaKnown RBP16.55■□□□□ 0.24
SCG5-209ENST00000498607 NUTM2DQ5VT03 806 aaPredicted RBP16.55■□□□□ 0.24
SCG5-209ENST00000498607 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
SCG5-209ENST00000498607 NRXN3Q9Y4C0 1643 aa16.54■□□□□ 0.24
SCG5-209ENST00000498607 C14orf93Q9H972 538 aaKnown RBP16.53■□□□□ 0.24
SCG5-209ENST00000498607 EID1Q9Y6B2 187 aa16.53■□□□□ 0.24
SCG5-209ENST00000498607 SETD1AO15047 1707 aaKnown RBP16.53■□□□□ 0.24
SCG5-209ENST00000498607 IQGAP1P46940 1657 aa16.53■□□□□ 0.24
SCG5-209ENST00000498607 PLEKHG1Q9ULL1 1385 aa16.52■□□□□ 0.24
SCG5-209ENST00000498607 POLR1AO95602 1720 aaPredicted RBP16.52■□□□□ 0.24
SCG5-209ENST00000498607 ALKQ9UM73 1620 aa16.52■□□□□ 0.23
SCG5-209ENST00000498607 NBPF1Q3BBV0 1214 aa16.51■□□□□ 0.23
SCG5-209ENST00000498607 CFAP70Q5T0N1 1121 aa16.51■□□□□ 0.23
SCG5-209ENST00000498607 TXNDC2Q86VQ3 553 aa16.51■□□□□ 0.23
SCG5-209ENST00000498607 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
SCG5-209ENST00000498607 LTKP29376 864 aa16.5■□□□□ 0.23
SCG5-209ENST00000498607 CARD11Q9BXL7 1154 aa16.5■□□□□ 0.23
SCG5-209ENST00000498607 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
SCG5-209ENST00000498607 USP47Q96K76 1375 aa16.49■□□□□ 0.23
SCG5-209ENST00000498607 LMTK3Q96Q04 1460 aa16.48■□□□□ 0.23
SCG5-209ENST00000498607 DIP2AQ14689 1571 aa16.48■□□□□ 0.23
SCG5-209ENST00000498607 EIF4G2P78344 907 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCG5-209ENST00000498607 ANKLE2Q86XL3 938 aa16.47■□□□□ 0.23
SCG5-209ENST00000498607 ADAMTS13Q76LX8 1427 aa16.46■□□□□ 0.23
SCG5-209ENST00000498607 MED14O60244 1454 aa16.46■□□□□ 0.23
SCG5-209ENST00000498607 HSPA5P11021 654 aaKnown RBP16.44■□□□□ 0.22
SCG5-209ENST00000498607 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
SCG5-209ENST00000498607 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
SCG5-209ENST00000498607 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
SCG5-209ENST00000498607 BCANQ96GW7 911 aa16.42■□□□□ 0.22
SCG5-209ENST00000498607 NPHP4O75161 1426 aaPredicted RBP16.42■□□□□ 0.22
SCG5-209ENST00000498607 YTHDC2Q9H6S0 1430 aaKnown RBP16.42■□□□□ 0.22
SCG5-209ENST00000498607 KNDC1Q76NI1 1749 aa16.42■□□□□ 0.22
SCG5-209ENST00000498607 TMEM132EQ6IEE7 984 aa16.41■□□□□ 0.22
SCG5-209ENST00000498607 LRPPRCP42704 1394 aaKnown RBP16.4■□□□□ 0.22
SCG5-209ENST00000498607 FKBP8Q14318 412 aa16.4■□□□□ 0.22
SCG5-209ENST00000498607 TBX22Q9Y458 520 aa16.4■□□□□ 0.22
SCG5-209ENST00000498607 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
SCG5-209ENST00000498607 METP08581 1390 aa16.39■□□□□ 0.21
SCG5-209ENST00000498607 HSPA2P54652 639 aa16.38■□□□□ 0.21
SCG5-209ENST00000498607 CPS1P31327 1500 aa16.38■□□□□ 0.21
SCG5-209ENST00000498607 NCKAP5LQ9HCH0 1330 aa16.38■□□□□ 0.21
SCG5-209ENST00000498607 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
SCG5-209ENST00000498607 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
SCG5-209ENST00000498607 ABCC11Q96J66 1382 aa16.37■□□□□ 0.21
SCG5-209ENST00000498607 TECPR2O15040 1411 aa16.36■□□□□ 0.21
SCG5-209ENST00000498607 XRN1Q8IZH2 1706 aaKnown RBP16.36■□□□□ 0.21
SCG5-209ENST00000498607 STRCQ7RTU9 1775 aa16.36■□□□□ 0.21
SCG5-209ENST00000498607 ST20-MTHFSA0A0A6YYL1 179 aa16.36■□□□□ 0.21
SCG5-209ENST00000498607 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
SCG5-209ENST00000498607 QRICH2Q9H0J4 1663 aa16.36■□□□□ 0.21
SCG5-209ENST00000498607 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms