RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ARHGAP31Q2M1Z3 1444 aa11.42□□□□□ -0.58
PDZRN3-212ENST00000498048 TMEM131LA2VDJ0 1609 aa11.42□□□□□ -0.58
PDZRN3-212ENST00000498048 EIF4G2P78344 907 aaKnown RBP eCLIP11.41□□□□□ -0.58
PDZRN3-212ENST00000498048 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
PDZRN3-212ENST00000498048 NEXMIFQ5QGS0 1516 aa11.4□□□□□ -0.58
PDZRN3-212ENST00000498048 KDM5AP29375 1690 aaKnown RBP11.4□□□□□ -0.58
PDZRN3-212ENST00000498048 QRICH2Q9H0J4 1663 aa11.4□□□□□ -0.58
PDZRN3-212ENST00000498048 HSPA5P11021 654 aaKnown RBP11.4□□□□□ -0.58
PDZRN3-212ENST00000498048 NOS1P29475 1434 aa11.4□□□□□ -0.58
PDZRN3-212ENST00000498048 ARHGEF28Q8N1W1 1705 aaKnown RBP11.4□□□□□ -0.58
PDZRN3-212ENST00000498048 ROCK2O75116 1388 aaKnown RBP11.4□□□□□ -0.59
PDZRN3-212ENST00000498048 C3P01024 1663 aa11.4□□□□□ -0.59
PDZRN3-212ENST00000498048 ERVK-7P63135 1459 aa11.39□□□□□ -0.59
PDZRN3-212ENST00000498048 GGT6Q6P531 493 aa11.39□□□□□ -0.59
PDZRN3-212ENST00000498048 HIRIP3Q9BW71 556 aaPredicted RBP11.39□□□□□ -0.59
PDZRN3-212ENST00000498048 SETBP1Q9Y6X0 1596 aa11.38□□□□□ -0.59
PDZRN3-212ENST00000498048 DCAF11Q8TEB1 546 aa11.38□□□□□ -0.59
PDZRN3-212ENST00000498048 MYOM1P52179 1685 aa11.38□□□□□ -0.59
PDZRN3-212ENST00000498048 GPRASP1Q5JY77 1395 aa11.37□□□□□ -0.59
PDZRN3-212ENST00000498048 WASHC2CQ9Y4E1 1318 aa11.36□□□□□ -0.59
PDZRN3-212ENST00000498048 UBR1Q8IWV7 1749 aa11.36□□□□□ -0.59
PDZRN3-212ENST00000498048 RGL3Q3MIN7 710 aa11.36□□□□□ -0.59
PDZRN3-212ENST00000498048 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
PDZRN3-212ENST00000498048 NRXN1Q9ULB1 1477 aa11.36□□□□□ -0.59
PDZRN3-212ENST00000498048 SETD1AO15047 1707 aaKnown RBP11.35□□□□□ -0.59
PDZRN3-212ENST00000498048 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
PDZRN3-212ENST00000498048 RIMS1Q86UR5 1692 aaKnown RBP11.34□□□□□ -0.59
PDZRN3-212ENST00000498048 MIER1Q8N108 512 aa11.33□□□□□ -0.6
PDZRN3-212ENST00000498048 CARD11Q9BXL7 1154 aa11.33□□□□□ -0.6
PDZRN3-212ENST00000498048 SAMD1Q6SPF0 538 aaPredicted RBP11.32□□□□□ -0.6
PDZRN3-212ENST00000498048 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
PDZRN3-212ENST00000498048 DDX10Q13206 875 aaKnown RBP11.31□□□□□ -0.6
PDZRN3-212ENST00000498048 PIK3C2GO75747 1445 aa11.31□□□□□ -0.6
PDZRN3-212ENST00000498048 KNDC1Q76NI1 1749 aa11.31□□□□□ -0.6
PDZRN3-212ENST00000498048 SCAF11Q99590 1463 aaKnown RBP11.31□□□□□ -0.6
PDZRN3-212ENST00000498048 RNF39Q9H2S5 420 aa11.3□□□□□ -0.6
PDZRN3-212ENST00000498048 KIF7Q2M1P5 1343 aa11.29□□□□□ -0.6
PDZRN3-212ENST00000498048 EIF3AQ14152 1382 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-212ENST00000498048 ADGRB1O14514 1584 aa11.28□□□□□ -0.6
PDZRN3-212ENST00000498048 ZNF142P52746 1687 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-212ENST00000498048 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
PDZRN3-212ENST00000498048 ASXL1Q8IXJ9 1541 aa11.28□□□□□ -0.6
PDZRN3-212ENST00000498048 NRXN3Q9Y4C0 1643 aa11.27□□□□□ -0.6
PDZRN3-212ENST00000498048 CHGAP10645 457 aaKnown RBP11.27□□□□□ -0.61
PDZRN3-212ENST00000498048 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
PDZRN3-212ENST00000498048 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
PDZRN3-212ENST00000498048 ADAMTSL3P82987 1691 aa11.25□□□□□ -0.61
PDZRN3-212ENST00000498048 MLECQ14165 292 aa11.25□□□□□ -0.61
PDZRN3-212ENST00000498048 NBPF1Q3BBV0 1214 aa11.24□□□□□ -0.61
PDZRN3-212ENST00000498048 ARID4BQ4LE39 1312 aaPredicted RBP11.24□□□□□ -0.61
PDZRN3-212ENST00000498048 A2ML1A8K2U0 1454 aa11.24□□□□□ -0.61
PDZRN3-212ENST00000498048 ANP32CO43423 234 aa11.23□□□□□ -0.61
PDZRN3-212ENST00000498048 RPGRIP1LQ68CZ1 1315 aa11.23□□□□□ -0.61
PDZRN3-212ENST00000498048 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
PDZRN3-212ENST00000498048 ALKQ9UM73 1620 aa11.23□□□□□ -0.61
PDZRN3-212ENST00000498048 ST20-MTHFSA0A0A6YYL1 179 aa11.22□□□□□ -0.61
PDZRN3-212ENST00000498048 C11orf95C9JLR9 678 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-212ENST00000498048 ZFYVE9O95405 1425 aa11.22□□□□□ -0.61
PDZRN3-212ENST00000498048 ESF1Q9H501 851 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-212ENST00000498048 SLC52A1Q9NWF4 448 aa11.22□□□□□ -0.61
PDZRN3-212ENST00000498048 DISP3Q9P2K9 1392 aa11.22□□□□□ -0.61
PDZRN3-212ENST00000498048 YTHDC1Q96MU7 727 aaKnown RBP11.21□□□□□ -0.61
PDZRN3-212ENST00000498048 POLR3GLQ9BT43 218 aa11.21□□□□□ -0.61
PDZRN3-212ENST00000498048 ATF5Q9Y2D1 282 aaPredicted RBP11.21□□□□□ -0.61
PDZRN3-212ENST00000498048 ANKRD26Q9UPS8 1709 aa11.21□□□□□ -0.62
PDZRN3-212ENST00000498048 NLRP1Q9C000 1473 aa11.2□□□□□ -0.62
PDZRN3-212ENST00000498048 TNRQ92752 1358 aa11.2□□□□□ -0.62
PDZRN3-212ENST00000498048 CEP170BQ9Y4F5 1589 aaPredicted RBP11.2□□□□□ -0.62
PDZRN3-212ENST00000498048 KIF20BQ96Q89 1820 aa11.19□□□□□ -0.62
PDZRN3-212ENST00000498048 ITSN1Q15811 1721 aa11.19□□□□□ -0.62
PDZRN3-212ENST00000498048 CENPBP07199 599 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-212ENST00000498048 USP32Q8NFA0 1604 aa11.19□□□□□ -0.62
PDZRN3-212ENST00000498048 RIMS2Q9UQ26 1411 aa11.18□□□□□ -0.62
PDZRN3-212ENST00000498048 ZMYM3Q14202 1370 aa11.18□□□□□ -0.62
PDZRN3-212ENST00000498048 IDI1Q13907 227 aa11.18□□□□□ -0.62
PDZRN3-212ENST00000498048 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
PDZRN3-212ENST00000498048 C1QBPQ07021 282 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-212ENST00000498048 FBXO31Q5XUX0 539 aaPredicted RBP11.17□□□□□ -0.62
PDZRN3-212ENST00000498048 CPS1P31327 1500 aa11.17□□□□□ -0.62
PDZRN3-212ENST00000498048 TULP4Q9NRJ4 1543 aa11.17□□□□□ -0.62
PDZRN3-212ENST00000498048 DIP2AQ14689 1571 aa11.16□□□□□ -0.62
PDZRN3-212ENST00000498048 DLC1Q96QB1 1528 aa11.16□□□□□ -0.62
PDZRN3-212ENST00000498048 CFAP70Q5T0N1 1121 aa11.16□□□□□ -0.62
PDZRN3-212ENST00000498048 PTPRMP28827 1452 aa11.15□□□□□ -0.62
PDZRN3-212ENST00000498048 CCER2I3L3R5 266 aa11.15□□□□□ -0.62
PDZRN3-212ENST00000498048 TMF1P82094 1093 aa11.15□□□□□ -0.62
PDZRN3-212ENST00000498048 TESK2Q96S53 571 aa11.15□□□□□ -0.62
PDZRN3-212ENST00000498048 STAG3Q9UJ98 1225 aa11.15□□□□□ -0.62
PDZRN3-212ENST00000498048 SETD1BQ9UPS6 1966 aaKnown RBP11.14□□□□□ -0.63
PDZRN3-212ENST00000498048 VGFO15240 615 aaPredicted RBP11.14□□□□□ -0.63
PDZRN3-212ENST00000498048 SLIT1O75093 1534 aa11.14□□□□□ -0.63
PDZRN3-212ENST00000498048 AKAP12Q02952 1782 aa11.13□□□□□ -0.63
PDZRN3-212ENST00000498048 NUTM2DQ5VT03 806 aaPredicted RBP11.12□□□□□ -0.63
PDZRN3-212ENST00000498048 C14orf93Q9H972 538 aaKnown RBP11.12□□□□□ -0.63
PDZRN3-212ENST00000498048 XRN1Q8IZH2 1706 aaKnown RBP11.12□□□□□ -0.63
PDZRN3-212ENST00000498048 CENPJQ9HC77 1338 aaPredicted RBP11.11□□□□□ -0.63
PDZRN3-212ENST00000498048 TOPAZ1Q8N9V7 1692 aa11.11□□□□□ -0.63
PDZRN3-212ENST00000498048 YTHDC2Q9H6S0 1430 aaKnown RBP11.11□□□□□ -0.63
PDZRN3-212ENST00000498048 SPINK5Q9NQ38 1064 aaPredicted RBP11.11□□□□□ -0.63
PDZRN3-212ENST00000498048 MON2Q7Z3U7 1717 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms