RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 ZFYVE9O95405 1425 aa29.16■■■□□ 2.26
HLA-B-255ENST00000498007 ZNF326Q5BKZ1 582 aaKnown RBP29.13■■■□□ 2.25
HLA-B-255ENST00000498007 PPP1R15AO75807 674 aaPredicted RBP29.11■■■□□ 2.25
HLA-B-255ENST00000498007 NUTM2DQ5VT03 806 aaPredicted RBP29.09■■■□□ 2.25
HLA-B-255ENST00000498007 SENP3Q9H4L4 574 aaPredicted RBP29.08■■■□□ 2.25
HLA-B-255ENST00000498007 NEXMIFQ5QGS0 1516 aa29.08■■■□□ 2.25
HLA-B-255ENST00000498007 ANKRD30BQ9BXX2 1392 aa29.07■■■□□ 2.24
HLA-B-255ENST00000498007 HDGFP51858 240 aaKnown RBP29.06■■■□□ 2.24
HLA-B-255ENST00000498007 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.05■■■□□ 2.24
HLA-B-255ENST00000498007 PCGF6Q9BYE7 350 aa29.05■■■□□ 2.24
HLA-B-255ENST00000498007 BCANQ96GW7 911 aa29.04■■■□□ 2.24
HLA-B-255ENST00000498007 PLEKHG1Q9ULL1 1385 aa29.02■■■□□ 2.24
HLA-B-255ENST00000498007 ZNF335Q9H4Z2 1342 aaPredicted RBP29.02■■■□□ 2.24
HLA-B-255ENST00000498007 PPLO60437 1756 aa29.02■■■□□ 2.24
HLA-B-255ENST00000498007 SPATA31E1Q6ZUB1 1445 aa29.02■■■□□ 2.24
HLA-B-255ENST00000498007 RGL3Q3MIN7 710 aa28.99■■■□□ 2.23
HLA-B-255ENST00000498007 IFT172Q9UG01 1749 aa28.98■■■□□ 2.23
HLA-B-255ENST00000498007 LTBP4Q8N2S1 1624 aa28.98■■■□□ 2.23
HLA-B-255ENST00000498007 SLC26A8Q96RN1 970 aa28.97■■■□□ 2.23
HLA-B-255ENST00000498007 DHX57Q6P158 1386 aaKnown RBP28.97■■■□□ 2.23
HLA-B-255ENST00000498007 NRXN3Q9Y4C0 1643 aa28.94■■■□□ 2.22
HLA-B-255ENST00000498007 RPGRIP1LQ68CZ1 1315 aa28.94■■■□□ 2.22
HLA-B-255ENST00000498007 STRCP1A6NGW2 1772 aa28.93■■■□□ 2.22
HLA-B-255ENST00000498007 DIP2AQ14689 1571 aa28.92■■■□□ 2.22
HLA-B-255ENST00000498007 SETBP1Q9Y6X0 1596 aa28.92■■■□□ 2.22
HLA-B-255ENST00000498007 ADAMTS13Q76LX8 1427 aa28.91■■■□□ 2.22
HLA-B-255ENST00000498007 VGFO15240 615 aaPredicted RBP28.88■■■□□ 2.21
HLA-B-255ENST00000498007 CPS1P31327 1500 aa28.88■■■□□ 2.21
HLA-B-255ENST00000498007 CERKQ8TCT0 537 aa28.84■■■□□ 2.21
HLA-B-255ENST00000498007 NWD1Q149M9 1564 aa28.84■■■□□ 2.21
HLA-B-255ENST00000498007 TBX22Q9Y458 520 aa28.82■■■□□ 2.2
HLA-B-255ENST00000498007 CHD2O14647 1828 aaKnown RBP28.82■■■□□ 2.2
HLA-B-255ENST00000498007 SETD1AO15047 1707 aaKnown RBP28.81■■■□□ 2.2
HLA-B-255ENST00000498007 MYOM2P54296 1465 aa28.81■■■□□ 2.2
HLA-B-255ENST00000498007 ADGRF5Q8IZF2 1346 aa28.81■■■□□ 2.2
HLA-B-255ENST00000498007 ALKQ9UM73 1620 aa28.79■■■□□ 2.2
HLA-B-255ENST00000498007 SIN3AQ96ST3 1273 aa28.77■■■□□ 2.2
HLA-B-255ENST00000498007 LRRC7Q96NW7 1537 aa28.76■■■□□ 2.19
HLA-B-255ENST00000498007 KCNA6P17658 529 aa28.76■■■□□ 2.19
HLA-B-255ENST00000498007 PIK3C2GO75747 1445 aa28.76■■■□□ 2.19
HLA-B-255ENST00000498007 NKTRP30414 1462 aaKnown RBP28.75■■■□□ 2.19
HLA-B-255ENST00000498007 METP08581 1390 aa28.75■■■□□ 2.19
HLA-B-255ENST00000498007 PIK3R4Q99570 1358 aa28.75■■■□□ 2.19
HLA-B-255ENST00000498007 DCAF11Q8TEB1 546 aa28.74■■■□□ 2.19
HLA-B-255ENST00000498007 IQSEC2Q5JU85 1478 aa28.73■■■□□ 2.19
HLA-B-255ENST00000498007 NRXN1Q9ULB1 1477 aa28.73■■■□□ 2.19
HLA-B-255ENST00000498007 NEUROD1Q13562 356 aa28.73■■■□□ 2.19
HLA-B-255ENST00000498007 XRN1Q8IZH2 1706 aaKnown RBP28.72■■■□□ 2.19
HLA-B-255ENST00000498007 PTPRUQ92729 1446 aa28.72■■■□□ 2.19
HLA-B-255ENST00000498007 KDM2AQ9Y2K7 1162 aa28.72■■■□□ 2.19
HLA-B-255ENST00000498007 LAMC1P11047 1609 aa28.71■■■□□ 2.19
HLA-B-255ENST00000498007 XIRP1Q702N8 1843 aaKnown RBP28.71■■■□□ 2.19
HLA-B-255ENST00000498007 AMOTL2Q9Y2J4 779 aa28.67■■■□□ 2.18
HLA-B-255ENST00000498007 ASXL1Q8IXJ9 1541 aa28.66■■■□□ 2.18
HLA-B-255ENST00000498007 PROSER2Q86WR7 435 aaPredicted RBP28.66■■■□□ 2.18
HLA-B-255ENST00000498007 TMEM94Q12767 1356 aa28.65■■■□□ 2.18
HLA-B-255ENST00000498007 RBM33Q96EV2 1170 aaKnown RBP28.65■■■□□ 2.18
HLA-B-255ENST00000498007 CFAP70Q5T0N1 1121 aa28.61■■■□□ 2.17
HLA-B-255ENST00000498007 STAC3Q96MF2 364 aa28.6■■■□□ 2.17
HLA-B-255ENST00000498007 L3MBTL2Q969R5 705 aa28.59■■■□□ 2.17
HLA-B-255ENST00000498007 TMEM132EQ6IEE7 984 aa28.58■■■□□ 2.17
HLA-B-255ENST00000498007 C14orf93Q9H972 538 aaKnown RBP28.58■■■□□ 2.17
HLA-B-255ENST00000498007 FBXO41Q8TF61 875 aa28.57■■■□□ 2.16
HLA-B-255ENST00000498007 KNDC1Q76NI1 1749 aa28.57■■■□□ 2.16
HLA-B-255ENST00000498007 PTCH1Q13635 1447 aa28.56■■■□□ 2.16
HLA-B-255ENST00000498007 TONSLQ96HA7 1378 aa28.56■■■□□ 2.16
HLA-B-255ENST00000498007 PRAG1Q86YV5 1406 aa28.55■■■□□ 2.16
HLA-B-255ENST00000498007 UBAP1LF5GYI3 381 aa28.55■■■□□ 2.16
HLA-B-255ENST00000498007 C14orf37Q86TY3 774 aa28.54■■■□□ 2.16
HLA-B-255ENST00000498007 STK26Q9P289 416 aa28.54■■■□□ 2.16
HLA-B-255ENST00000498007 YTHDC2Q9H6S0 1430 aaKnown RBP28.53■■■□□ 2.16
HLA-B-255ENST00000498007 ROBO2Q9HCK4 1378 aa28.53■■■□□ 2.16
HLA-B-255ENST00000498007 CCER1Q8TC90 406 aaPredicted RBP28.53■■■□□ 2.16
HLA-B-255ENST00000498007 ADGRB1O14514 1584 aa28.53■■■□□ 2.16
HLA-B-255ENST00000498007 LRPPRCP42704 1394 aaKnown RBP28.52■■■□□ 2.16
HLA-B-255ENST00000498007 KIAA1210Q9ULL0 1709 aa28.52■■■□□ 2.16
HLA-B-255ENST00000498007 MSH6P52701 1360 aa28.51■■■□□ 2.16
HLA-B-255ENST00000498007 NALCNQ8IZF0 1738 aa28.5■■■□□ 2.15
HLA-B-255ENST00000498007 TECPR2O15040 1411 aa28.49■■■□□ 2.15
HLA-B-255ENST00000498007 NCOA3Q9Y6Q9 1424 aa28.49■■■□□ 2.15
HLA-B-255ENST00000498007 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.48■■■□□ 2.15
HLA-B-255ENST00000498007 CLSPNQ9HAW4 1339 aa28.47■■■□□ 2.15
HLA-B-255ENST00000498007 TOM1O60784 492 aa28.47■■■□□ 2.15
HLA-B-255ENST00000498007 ILDR1Q86SU0 546 aaPredicted RBP28.46■■■□□ 2.15
HLA-B-255ENST00000498007 ABCC11Q96J66 1382 aa28.46■■■□□ 2.15
HLA-B-255ENST00000498007 SCAF1Q9H7N4 1312 aaKnown RBP28.45■■■□□ 2.15
HLA-B-255ENST00000498007 TRPM1Q7Z4N2 1603 aa28.45■■■□□ 2.14
HLA-B-255ENST00000498007 ADGRL3Q9HAR2 1447 aa28.43■■■□□ 2.14
HLA-B-255ENST00000498007 PIP4K2BP78356 416 aa28.43■■■□□ 2.14
HLA-B-255ENST00000498007 PLEKHH1Q9ULM0 1364 aa28.4■■■□□ 2.14
HLA-B-255ENST00000498007 DLC1Q96QB1 1528 aa28.4■■■□□ 2.14
HLA-B-255ENST00000498007 WAPLQ7Z5K2 1190 aa28.39■■■□□ 2.14
HLA-B-255ENST00000498007 C19orf44Q9H6X5 657 aa28.39■■■□□ 2.14
HLA-B-255ENST00000498007 TRAK1Q9UPV9 953 aa28.39■■■□□ 2.14
HLA-B-255ENST00000498007 ARHGEF28Q8N1W1 1705 aaKnown RBP28.38■■■□□ 2.13
HLA-B-255ENST00000498007 FAM135BQ49AJ0 1406 aa28.38■■■□□ 2.13
HLA-B-255ENST00000498007 DCCP43146 1447 aa28.37■■■□□ 2.13
HLA-B-255ENST00000498007 ATF3P18847 181 aa28.37■■■□□ 2.13
HLA-B-255ENST00000498007 NBPF1Q3BBV0 1214 aa28.37■■■□□ 2.13
HLA-B-255ENST00000498007 PRAM1Q96QH2 718 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms