RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 ST18O60284 1047 aa9.19□□□□□ -0.94
UBE3C-208ENST00000497368 CCDC18Q5T9S5 1454 aa9.19□□□□□ -0.94
UBE3C-208ENST00000497368 MAGI2Q86UL8 1455 aa9.19□□□□□ -0.94
UBE3C-208ENST00000497368 ARHGAP5Q13017 1502 aa9.19□□□□□ -0.94
UBE3C-208ENST00000497368 KIF3CO14782 793 aa9.18□□□□□ -0.94
UBE3C-208ENST00000497368 HOXB3P14651 431 aaPredicted RBP9.18□□□□□ -0.94
UBE3C-208ENST00000497368 SCAPERQ9BY12 1400 aa9.18□□□□□ -0.94
UBE3C-208ENST00000497368 INO80Q9ULG1 1556 aaPredicted RBP9.18□□□□□ -0.94
UBE3C-208ENST00000497368 TIAM1Q13009 1591 aa9.17□□□□□ -0.94
UBE3C-208ENST00000497368 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
UBE3C-208ENST00000497368 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.17□□□□□ -0.94
UBE3C-208ENST00000497368 C3P01024 1663 aa9.16□□□□□ -0.94
UBE3C-208ENST00000497368 PLEKHD1A6NEE1 506 aa9.16□□□□□ -0.94
UBE3C-208ENST00000497368 PREX1Q8TCU6 1659 aa9.16□□□□□ -0.94
UBE3C-208ENST00000497368 PLXNC1O60486 1568 aa9.16□□□□□ -0.94
UBE3C-208ENST00000497368 SYCP2Q9BX26 1530 aa9.15□□□□□ -0.94
UBE3C-208ENST00000497368 ZNF518AQ6AHZ1 1483 aa9.15□□□□□ -0.94
UBE3C-208ENST00000497368 CLIP1P30622 1438 aa9.15□□□□□ -0.94
UBE3C-208ENST00000497368 C9orf84Q5VXU9 1444 aa9.15□□□□□ -0.94
UBE3C-208ENST00000497368 TRAPPC8Q9Y2L5 1435 aa9.15□□□□□ -0.94
UBE3C-208ENST00000497368 UBTFP17480 764 aaKnown RBP9.15□□□□□ -0.94
UBE3C-208ENST00000497368 SPRYD3Q8NCJ5 442 aa9.15□□□□□ -0.94
UBE3C-208ENST00000497368 PAXIP1Q6ZW49 1069 aaPredicted RBP9.14□□□□□ -0.95
UBE3C-208ENST00000497368 CFAP44Q96MT7 982 aa9.14□□□□□ -0.95
UBE3C-208ENST00000497368 STRCQ7RTU9 1775 aa9.14□□□□□ -0.95
UBE3C-208ENST00000497368 MLH3Q9UHC1 1453 aa9.14□□□□□ -0.95
UBE3C-208ENST00000497368 ADGBQ8N7X0 1667 aa9.13□□□□□ -0.95
UBE3C-208ENST00000497368 POTEMA6NI47 508 aa9.13□□□□□ -0.95
UBE3C-208ENST00000497368 DOK7Q18PE1 504 aa9.13□□□□□ -0.95
UBE3C-208ENST00000497368 POTEGQ6S5H5 508 aa9.13□□□□□ -0.95
UBE3C-208ENST00000497368 AGLP35573 1532 aa9.13□□□□□ -0.95
UBE3C-208ENST00000497368 GPATCH8Q9UKJ3 1502 aaKnown RBP9.13□□□□□ -0.95
UBE3C-208ENST00000497368 ATP10AO60312 1499 aa9.13□□□□□ -0.95
UBE3C-208ENST00000497368 EHBP1L1Q8N3D4 1523 aa9.12□□□□□ -0.95
UBE3C-208ENST00000497368 MROH2AA6NES4 1674 aa9.11□□□□□ -0.95
UBE3C-208ENST00000497368 CADPS2Q86UW7 1296 aa9.11□□□□□ -0.95
UBE3C-208ENST00000497368 ZNF710Q8N1W2 664 aa9.11□□□□□ -0.95
UBE3C-208ENST00000497368 MARVELD3Q96A59 401 aa9.11□□□□□ -0.95
UBE3C-208ENST00000497368 GPHNQ9NQX3 736 aaPredicted RBP9.11□□□□□ -0.95
UBE3C-208ENST00000497368 NCKAP5LQ9HCH0 1330 aa9.1□□□□□ -0.95
UBE3C-208ENST00000497368 CEP162Q5TB80 1403 aa9.1□□□□□ -0.95
UBE3C-208ENST00000497368 SUPT6HQ7KZ85 1726 aaKnown RBP9.1□□□□□ -0.95
UBE3C-208ENST00000497368 ATP7AQ04656 1500 aa9.1□□□□□ -0.95
UBE3C-208ENST00000497368 DSG2Q14126 1118 aa9.09□□□□□ -0.95
UBE3C-208ENST00000497368 CRISPLD2Q9H0B8 497 aa9.09□□□□□ -0.95
UBE3C-208ENST00000497368 CLTCQ00610 1675 aaKnown RBP9.08□□□□□ -0.96
UBE3C-208ENST00000497368 FOXK1P85037 733 aa9.08□□□□□ -0.96
UBE3C-208ENST00000497368 ZNF142P52746 1687 aaPredicted RBP9.07□□□□□ -0.96
UBE3C-208ENST00000497368 PLPP6Q8IY26 295 aa9.07□□□□□ -0.96
UBE3C-208ENST00000497368 AFAP1Q8N556 730 aa9.07□□□□□ -0.96
UBE3C-208ENST00000497368 MBD5Q9P267 1494 aa9.07□□□□□ -0.96
UBE3C-208ENST00000497368 MYO3AQ8NEV4 1616 aa9.06□□□□□ -0.96
UBE3C-208ENST00000497368 RIMBP2O15034 1052 aa9.06□□□□□ -0.96
UBE3C-208ENST00000497368 EFCAB2Q5VUJ9 269 aa9.06□□□□□ -0.96
UBE3C-208ENST00000497368 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
UBE3C-208ENST00000497368 PDE4AP27815 886 aa9.05□□□□□ -0.96
UBE3C-208ENST00000497368 EMP3P54852 163 aa9.05□□□□□ -0.96
UBE3C-208ENST00000497368 KHSRPQ92945 711 aaKnown RBP eCLIP9.05□□□□□ -0.963e-13■■■■□ 26
UBE3C-208ENST00000497368 ATP1B4Q9UN42 357 aaPredicted RBP9.05□□□□□ -0.96
UBE3C-208ENST00000497368 ARSIQ5FYB1 569 aa9.04□□□□□ -0.96
UBE3C-208ENST00000497368 PPP1R15BQ5SWA1 713 aa9.04□□□□□ -0.96
UBE3C-208ENST00000497368 GPR153Q6NV75 609 aa9.04□□□□□ -0.96
UBE3C-208ENST00000497368 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
UBE3C-208ENST00000497368 ARID4BQ4LE39 1312 aaPredicted RBP9.04□□□□□ -0.96
UBE3C-208ENST00000497368 KIAA1107Q9UPP5 1409 aa9.03□□□□□ -0.96
UBE3C-208ENST00000497368 CROCC2H7BZ55 1655 aa9.03□□□□□ -0.96
UBE3C-208ENST00000497368 CAMSAP2Q08AD1 1489 aa9.02□□□□□ -0.96
UBE3C-208ENST00000497368 NCOA2Q15596 1464 aa9.02□□□□□ -0.96
UBE3C-208ENST00000497368 MROH1Q8NDA8 1641 aa9.02□□□□□ -0.96
UBE3C-208ENST00000497368 HSPA2P54652 639 aa9.02□□□□□ -0.97
UBE3C-208ENST00000497368 ZSWIM6Q9HCJ5 1215 aa9.02□□□□□ -0.97
UBE3C-208ENST00000497368 CDK11AQ9UQ88 783 aaPredicted RBP9.02□□□□□ -0.97
UBE3C-208ENST00000497368 ARHGEF5Q12774 1597 aa9.02□□□□□ -0.97
UBE3C-208ENST00000497368 MLECQ14165 292 aa9.01□□□□□ -0.97
UBE3C-208ENST00000497368 DDX27Q96GQ7 796 aaKnown RBP9.01□□□□□ -0.97
UBE3C-208ENST00000497368 PCDHGA4Q9Y5G9 962 aa9.01□□□□□ -0.97
UBE3C-208ENST00000497368 SETD1BQ9UPS6 1966 aaKnown RBP9.01□□□□□ -0.97
UBE3C-208ENST00000497368 MAST1Q9Y2H9 1570 aa9□□□□□ -0.97
UBE3C-208ENST00000497368 VPS8Q8N3P4 1428 aa9□□□□□ -0.97
UBE3C-208ENST00000497368 FAM205CA6NFA0 338 aa9□□□□□ -0.97
UBE3C-208ENST00000497368 SLC34A2O95436 690 aa9□□□□□ -0.97
UBE3C-208ENST00000497368 RNF17Q9BXT8 1623 aaKnown RBP9□□□□□ -0.97
UBE3C-208ENST00000497368 A2MP01023 1474 aa9□□□□□ -0.97
UBE3C-208ENST00000497368 PLEKHH2Q8IVE3 1493 aa9□□□□□ -0.97
UBE3C-208ENST00000497368 ZNF644Q9H582 1327 aaPredicted RBP9□□□□□ -0.97
UBE3C-208ENST00000497368 POTEB3A0JP26 581 aa8.99□□□□□ -0.97
UBE3C-208ENST00000497368 CEBPAP49715 358 aaPredicted RBP8.99□□□□□ -0.97
UBE3C-208ENST00000497368 MFSD10Q14728 455 aa8.99□□□□□ -0.97
UBE3C-208ENST00000497368 POTEBQ6S5H4 581 aa8.99□□□□□ -0.97
UBE3C-208ENST00000497368 LRRC9Q6ZRR7 1453 aa8.99□□□□□ -0.97
UBE3C-208ENST00000497368 LTBP4Q8N2S1 1624 aa8.98□□□□□ -0.97
UBE3C-208ENST00000497368 NUDT7P0C024 238 aa8.98□□□□□ -0.97
UBE3C-208ENST00000497368 CEP170BQ9Y4F5 1589 aaPredicted RBP8.98□□□□□ -0.97
UBE3C-208ENST00000497368 MTUS2Q5JR59 1369 aa8.98□□□□□ -0.97
UBE3C-208ENST00000497368 CCNB3Q8WWL7 1395 aa8.98□□□□□ -0.97
UBE3C-208ENST00000497368 CCDC141Q6ZP82 1450 aa8.97□□□□□ -0.97
UBE3C-208ENST00000497368 MAP3K1Q13233 1512 aa8.97□□□□□ -0.97
UBE3C-208ENST00000497368 PTCD2Q8WV60 388 aaKnown RBP8.97□□□□□ -0.97
UBE3C-208ENST00000497368 UPF1Q92900 1129 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBE3C-208ENST00000497368 HS3ST6Q96QI5 342 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms