RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 RPRD2Q5VT52 1461 aaKnown RBP11.9□□□□□ -0.5
SRRM1-220ENST00000496882 TOM1O60784 492 aa11.89□□□□□ -0.51
SRRM1-220ENST00000496882 IDI1Q13907 227 aa11.89□□□□□ -0.51
SRRM1-220ENST00000496882 SLIT1O75093 1534 aa11.89□□□□□ -0.51
SRRM1-220ENST00000496882 PIK3C2BO00750 1634 aa11.89□□□□□ -0.51
SRRM1-220ENST00000496882 NOS1P29475 1434 aa11.88□□□□□ -0.51
SRRM1-220ENST00000496882 TMEM2Q9UHN6 1383 aa11.88□□□□□ -0.51
SRRM1-220ENST00000496882 ARHGAP23Q9P227 1491 aa11.88□□□□□ -0.51
SRRM1-220ENST00000496882 TET3O43151 1660 aa11.87□□□□□ -0.51
SRRM1-220ENST00000496882 HDGFP51858 240 aaKnown RBP11.87□□□□□ -0.51
SRRM1-220ENST00000496882 BCANQ96GW7 911 aa11.87□□□□□ -0.51
SRRM1-220ENST00000496882 UNC13BO14795 1591 aa11.87□□□□□ -0.51
SRRM1-220ENST00000496882 LTKP29376 864 aa11.86□□□□□ -0.51
SRRM1-220ENST00000496882 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-220ENST00000496882 NUP155O75694 1391 aa11.86□□□□□ -0.51
SRRM1-220ENST00000496882 SYNMO15061 1565 aa11.86□□□□□ -0.51
SRRM1-220ENST00000496882 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
SRRM1-220ENST00000496882 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
SRRM1-220ENST00000496882 PPP1R15AO75807 674 aaPredicted RBP11.85□□□□□ -0.51
SRRM1-220ENST00000496882 CHGAP10645 457 aaKnown RBP11.85□□□□□ -0.51
SRRM1-220ENST00000496882 PIP4K2BP78356 416 aa11.85□□□□□ -0.51
SRRM1-220ENST00000496882 GCC2Q8IWJ2 1684 aa11.84□□□□□ -0.51
SRRM1-220ENST00000496882 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
SRRM1-220ENST00000496882 IQGAP3Q86VI3 1631 aa11.82□□□□□ -0.52
SRRM1-220ENST00000496882 DISP3Q9P2K9 1392 aa11.82□□□□□ -0.52
SRRM1-220ENST00000496882 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.82□□□□□ -0.52
SRRM1-220ENST00000496882 LRRC7Q96NW7 1537 aa11.81□□□□□ -0.52
SRRM1-220ENST00000496882 RIMS2Q9UQ26 1411 aa11.79□□□□□ -0.52
SRRM1-220ENST00000496882 E9PCH4 1651 aa11.79□□□□□ -0.52
SRRM1-220ENST00000496882 SLC26A8Q96RN1 970 aa11.79□□□□□ -0.52
SRRM1-220ENST00000496882 KCNA6P17658 529 aa11.78□□□□□ -0.52
SRRM1-220ENST00000496882 TRIM52Q96A61 297 aa11.78□□□□□ -0.52
SRRM1-220ENST00000496882 PLEKHG1Q9ULL1 1385 aa11.78□□□□□ -0.52
SRRM1-220ENST00000496882 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.53
SRRM1-220ENST00000496882 STRCP1A6NGW2 1772 aa11.77□□□□□ -0.53
SRRM1-220ENST00000496882 TMEM131LA2VDJ0 1609 aa11.76□□□□□ -0.53
SRRM1-220ENST00000496882 HSPA1LP34931 641 aa11.76□□□□□ -0.53
SRRM1-220ENST00000496882 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
SRRM1-220ENST00000496882 ZFYVE9O95405 1425 aa11.76□□□□□ -0.53
SRRM1-220ENST00000496882 NAIPQ13075 1403 aa11.76□□□□□ -0.53
SRRM1-220ENST00000496882 ZNF326Q5BKZ1 582 aaKnown RBP11.75□□□□□ -0.53
SRRM1-220ENST00000496882 TMEM94Q12767 1356 aa11.74□□□□□ -0.53
SRRM1-220ENST00000496882 HFM1A2PYH4 1435 aa11.74□□□□□ -0.53
SRRM1-220ENST00000496882 NKTRP30414 1462 aaKnown RBP11.74□□□□□ -0.53
SRRM1-220ENST00000496882 MYO5BQ9ULV0 1848 aa11.74□□□□□ -0.53
SRRM1-220ENST00000496882 NUTM2DQ5VT03 806 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-220ENST00000496882 SPHKAPQ2M3C7 1700 aa11.72□□□□□ -0.53
SRRM1-220ENST00000496882 MSH6P52701 1360 aa11.72□□□□□ -0.53
SRRM1-220ENST00000496882 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
SRRM1-220ENST00000496882 TBX22Q9Y458 520 aa11.72□□□□□ -0.53
SRRM1-220ENST00000496882 DIP2AQ14689 1571 aa11.71□□□□□ -0.53
SRRM1-220ENST00000496882 NWD1Q149M9 1564 aa11.71□□□□□ -0.53
SRRM1-220ENST00000496882 SPDYE4A6NLX3 237 aa11.71□□□□□ -0.53
SRRM1-220ENST00000496882 PIK3R4Q99570 1358 aa11.69□□□□□ -0.54
SRRM1-220ENST00000496882 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
SRRM1-220ENST00000496882 TRPM2O94759 1503 aa11.69□□□□□ -0.54
SRRM1-220ENST00000496882 ALKQ9UM73 1620 aa11.68□□□□□ -0.54
SRRM1-220ENST00000496882 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
SRRM1-220ENST00000496882 FAM135BQ49AJ0 1406 aa11.67□□□□□ -0.54
SRRM1-220ENST00000496882 ADAMTS13Q76LX8 1427 aa11.67□□□□□ -0.54
SRRM1-220ENST00000496882 NCOA3Q9Y6Q9 1424 aa11.67□□□□□ -0.54
SRRM1-220ENST00000496882 XIRP1Q702N8 1843 aaKnown RBP11.67□□□□□ -0.54
SRRM1-220ENST00000496882 CHD2O14647 1828 aaKnown RBP11.66□□□□□ -0.54
SRRM1-220ENST00000496882 CLTCL1P53675 1640 aa11.66□□□□□ -0.54
SRRM1-220ENST00000496882 KIF1BO60333 1816 aa11.65□□□□□ -0.54
SRRM1-220ENST00000496882 VGFO15240 615 aaPredicted RBP11.65□□□□□ -0.54
SRRM1-220ENST00000496882 ATF3P18847 181 aa11.65□□□□□ -0.54
SRRM1-220ENST00000496882 AMOTL2Q9Y2J4 779 aa11.65□□□□□ -0.54
SRRM1-220ENST00000496882 MED1Q15648 1581 aaPredicted RBP11.65□□□□□ -0.54
SRRM1-220ENST00000496882 ILDR2Q71H61 639 aa11.64□□□□□ -0.55
SRRM1-220ENST00000496882 CADPS2Q86UW7 1296 aa11.64□□□□□ -0.55
SRRM1-220ENST00000496882 SLAIN2Q9P270 581 aa11.64□□□□□ -0.55
SRRM1-220ENST00000496882 RPGRIP1LQ68CZ1 1315 aa11.63□□□□□ -0.55
SRRM1-220ENST00000496882 SETBP1Q9Y6X0 1596 aa11.63□□□□□ -0.55
SRRM1-220ENST00000496882 C19orf44Q9H6X5 657 aa11.63□□□□□ -0.55
SRRM1-220ENST00000496882 ROBO1Q9Y6N7 1651 aa11.62□□□□□ -0.55
SRRM1-220ENST00000496882 CCDC144AA2RUR9 1427 aa11.61□□□□□ -0.55
SRRM1-220ENST00000496882 NEXMIFQ5QGS0 1516 aa11.61□□□□□ -0.55
SRRM1-220ENST00000496882 SOCS7O14512 581 aa11.61□□□□□ -0.55
SRRM1-220ENST00000496882 MPHOSPH9Q99550 1183 aa11.61□□□□□ -0.55
SRRM1-220ENST00000496882 MKRN4PQ13434 485 aaPredicted RBP11.6□□□□□ -0.55
SRRM1-220ENST00000496882 PTPRUQ92729 1446 aa11.6□□□□□ -0.55
SRRM1-220ENST00000496882 SETD5Q9C0A6 1442 aa11.6□□□□□ -0.55
SRRM1-220ENST00000496882 NRXN3Q9Y4C0 1643 aa11.59□□□□□ -0.55
SRRM1-220ENST00000496882 METP08581 1390 aa11.58□□□□□ -0.56
SRRM1-220ENST00000496882 DCCP43146 1447 aa11.58□□□□□ -0.56
SRRM1-220ENST00000496882 RGL3Q3MIN7 710 aa11.57□□□□□ -0.56
SRRM1-220ENST00000496882 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
SRRM1-220ENST00000496882 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.57□□□□□ -0.56
SRRM1-220ENST00000496882 JCADQ9P266 1359 aa11.56□□□□□ -0.56
SRRM1-220ENST00000496882 PHLPP1O60346 1717 aa11.56□□□□□ -0.56
SRRM1-220ENST00000496882 PROM2Q8N271 834 aa11.56□□□□□ -0.56
SRRM1-220ENST00000496882 ANKRD30BQ9BXX2 1392 aa11.54□□□□□ -0.56
SRRM1-220ENST00000496882 RAB3GAP2Q9H2M9 1393 aa11.54□□□□□ -0.56
SRRM1-220ENST00000496882 ADGRL3Q9HAR2 1447 aa11.54□□□□□ -0.56
SRRM1-220ENST00000496882 VASPP50552 380 aaPredicted RBP11.54□□□□□ -0.56
SRRM1-220ENST00000496882 PTCH1Q13635 1447 aa11.53□□□□□ -0.56
SRRM1-220ENST00000496882 PPLO60437 1756 aa11.53□□□□□ -0.56
SRRM1-220ENST00000496882 MEX3CQ5U5Q3 659 aaKnown RBP11.52□□□□□ -0.57
SRRM1-220ENST00000496882 BRINP3Q76B58 766 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms