RNA–Protein interactions for RNA: ENST00000495653.1

PTPN23-205, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-205ENST00000495653 FOXD1Q16676 465 aa20.85■□□□□ 0.93
PTPN23-205ENST00000495653 MPHOSPH9Q99550 1183 aa20.84■□□□□ 0.93
PTPN23-205ENST00000495653 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
PTPN23-205ENST00000495653 KIF1BO60333 1816 aa20.83■□□□□ 0.93
PTPN23-205ENST00000495653 NUTM2DQ5VT03 806 aaPredicted RBP20.82■□□□□ 0.92
PTPN23-205ENST00000495653 CPS1P31327 1500 aa20.82■□□□□ 0.92
PTPN23-205ENST00000495653 PPP1R15AO75807 674 aaPredicted RBP20.81■□□□□ 0.92
PTPN23-205ENST00000495653 IQSEC2Q5JU85 1478 aa20.8■□□□□ 0.92
PTPN23-205ENST00000495653 BCANQ96GW7 911 aa20.79■□□□□ 0.92
PTPN23-205ENST00000495653 SLC26A8Q96RN1 970 aa20.79■□□□□ 0.92
PTPN23-205ENST00000495653 PLEKHG1Q9ULL1 1385 aa20.79■□□□□ 0.92
PTPN23-205ENST00000495653 HDGFP51858 240 aaKnown RBP20.78■□□□□ 0.92
PTPN23-205ENST00000495653 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
PTPN23-205ENST00000495653 ACIN1Q9UKV3 1341 aaKnown RBP20.78■□□□□ 0.92
PTPN23-205ENST00000495653 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.77■□□□□ 0.922e-6■■□□□ 12.5
PTPN23-205ENST00000495653 NEXMIFQ5QGS0 1516 aa20.74■□□□□ 0.91
PTPN23-205ENST00000495653 LRRC7Q96NW7 1537 aa20.73■□□□□ 0.91
PTPN23-205ENST00000495653 CCDC144AA2RUR9 1427 aa20.72■□□□□ 0.91
PTPN23-205ENST00000495653 ADAMTS13Q76LX8 1427 aa20.71■□□□□ 0.91
PTPN23-205ENST00000495653 NRXN3Q9Y4C0 1643 aa20.7■□□□□ 0.9
PTPN23-205ENST00000495653 NWD1Q149M9 1564 aa20.69■□□□□ 0.9
PTPN23-205ENST00000495653 HRCP23327 699 aa20.69■□□□□ 0.9
PTPN23-205ENST00000495653 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
PTPN23-205ENST00000495653 DIP2AQ14689 1571 aa20.68■□□□□ 0.9
PTPN23-205ENST00000495653 PPLO60437 1756 aa20.68■□□□□ 0.9
PTPN23-205ENST00000495653 KCNA6P17658 529 aa20.68■□□□□ 0.9
PTPN23-205ENST00000495653 CHD2O14647 1828 aaKnown RBP20.68■□□□□ 0.9
PTPN23-205ENST00000495653 SETBP1Q9Y6X0 1596 aa20.68■□□□□ 0.9
PTPN23-205ENST00000495653 UBAP1LF5GYI3 381 aa20.67■□□□□ 0.9
PTPN23-205ENST00000495653 TBX22Q9Y458 520 aa20.67■□□□□ 0.9
PTPN23-205ENST00000495653 SPATA31E1Q6ZUB1 1445 aa20.65■□□□□ 0.9
PTPN23-205ENST00000495653 NKTRP30414 1462 aaKnown RBP20.63■□□□□ 0.89
PTPN23-205ENST00000495653 RGL3Q3MIN7 710 aa20.63■□□□□ 0.89
PTPN23-205ENST00000495653 IFT172Q9UG01 1749 aa20.62■□□□□ 0.89
PTPN23-205ENST00000495653 RPGRIP1LQ68CZ1 1315 aa20.62■□□□□ 0.89
PTPN23-205ENST00000495653 RBM33Q96EV2 1170 aaKnown RBP20.62■□□□□ 0.89
PTPN23-205ENST00000495653 TMEM94Q12767 1356 aa20.61■□□□□ 0.89
PTPN23-205ENST00000495653 ALKQ9UM73 1620 aa20.61■□□□□ 0.89
PTPN23-205ENST00000495653 PROSER2Q86WR7 435 aaPredicted RBP20.61■□□□□ 0.89
PTPN23-205ENST00000495653 ANKRD30BQ9BXX2 1392 aa20.6■□□□□ 0.89
PTPN23-205ENST00000495653 VGFO15240 615 aaPredicted RBP20.6■□□□□ 0.89
PTPN23-205ENST00000495653 PTPRUQ92729 1446 aa20.6■□□□□ 0.89
PTPN23-205ENST00000495653 PIK3R4Q99570 1358 aa20.59■□□□□ 0.89
PTPN23-205ENST00000495653 SETD1AO15047 1707 aaKnown RBP20.58■□□□□ 0.89
PTPN23-205ENST00000495653 METP08581 1390 aa20.58■□□□□ 0.88
PTPN23-205ENST00000495653 TOM1O60784 492 aa20.57■□□□□ 0.88
PTPN23-205ENST00000495653 XRN1Q8IZH2 1706 aaKnown RBP20.57■□□□□ 0.88
PTPN23-205ENST00000495653 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
PTPN23-205ENST00000495653 PIP4K2BP78356 416 aa20.56■□□□□ 0.88
PTPN23-205ENST00000495653 AMOTL2Q9Y2J4 779 aa20.55■□□□□ 0.88
PTPN23-205ENST00000495653 ADGRF5Q8IZF2 1346 aa20.54■□□□□ 0.88
PTPN23-205ENST00000495653 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.88
PTPN23-205ENST00000495653 MSH6P52701 1360 aa20.48■□□□□ 0.87
PTPN23-205ENST00000495653 PIK3C2GO75747 1445 aa20.48■□□□□ 0.87
PTPN23-205ENST00000495653 C14orf37Q86TY3 774 aa20.47■□□□□ 0.87
PTPN23-205ENST00000495653 MYOM2P54296 1465 aa20.47■□□□□ 0.87
PTPN23-205ENST00000495653 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.46■□□□□ 0.87
PTPN23-205ENST00000495653 NCOA3Q9Y6Q9 1424 aa20.45■□□□□ 0.86
PTPN23-205ENST00000495653 NRXN1Q9ULB1 1477 aa20.45■□□□□ 0.86
PTPN23-205ENST00000495653 ASXL1Q8IXJ9 1541 aa20.45■□□□□ 0.86
PTPN23-205ENST00000495653 HSPA1LP34931 641 aa20.43■□□□□ 0.86
PTPN23-205ENST00000495653 NALCNQ8IZF0 1738 aa20.41■□□□□ 0.86
PTPN23-205ENST00000495653 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
PTPN23-205ENST00000495653 PTCH1Q13635 1447 aa20.41■□□□□ 0.86
PTPN23-205ENST00000495653 ROBO1Q9Y6N7 1651 aa20.41■□□□□ 0.86
PTPN23-205ENST00000495653 LAMC1P11047 1609 aa20.4■□□□□ 0.86
PTPN23-205ENST00000495653 TMEM132EQ6IEE7 984 aa20.4■□□□□ 0.86
PTPN23-205ENST00000495653 DHX57Q6P158 1386 aaKnown RBP20.4■□□□□ 0.86
PTPN23-205ENST00000495653 DCAF11Q8TEB1 546 aa20.4■□□□□ 0.86
PTPN23-205ENST00000495653 C19orf44Q9H6X5 657 aa20.4■□□□□ 0.86
PTPN23-205ENST00000495653 KDM2AQ9Y2K7 1162 aa20.4■□□□□ 0.86
PTPN23-205ENST00000495653 PRAG1Q86YV5 1406 aa20.39■□□□□ 0.85
PTPN23-205ENST00000495653 CFAP70Q5T0N1 1121 aa20.38■□□□□ 0.85
PTPN23-205ENST00000495653 C14orf93Q9H972 538 aaKnown RBP20.38■□□□□ 0.85
PTPN23-205ENST00000495653 FAM135BQ49AJ0 1406 aa20.37■□□□□ 0.85
PTPN23-205ENST00000495653 ADGRL3Q9HAR2 1447 aa20.37■□□□□ 0.85
PTPN23-205ENST00000495653 KNDC1Q76NI1 1749 aa20.37■□□□□ 0.85
PTPN23-205ENST00000495653 SLAIN2Q9P270 581 aa20.37■□□□□ 0.85
PTPN23-205ENST00000495653 STK26Q9P289 416 aa20.37■□□□□ 0.85
PTPN23-205ENST00000495653 LRPPRCP42704 1394 aaKnown RBP20.36■□□□□ 0.85
PTPN23-205ENST00000495653 ATF3P18847 181 aa20.36■□□□□ 0.85
PTPN23-205ENST00000495653 CADPS2Q86UW7 1296 aa20.35■□□□□ 0.85
PTPN23-205ENST00000495653 DCCP43146 1447 aa20.35■□□□□ 0.85
PTPN23-205ENST00000495653 YTHDC2Q9H6S0 1430 aaKnown RBP20.35■□□□□ 0.85
PTPN23-205ENST00000495653 SIN3AQ96ST3 1273 aa20.34■□□□□ 0.85
PTPN23-205ENST00000495653 TECPR2O15040 1411 aa20.34■□□□□ 0.85
PTPN23-205ENST00000495653 ABCC11Q96J66 1382 aa20.32■□□□□ 0.84
PTPN23-205ENST00000495653 ADGRB1O14514 1584 aa20.31■□□□□ 0.84
PTPN23-205ENST00000495653 MST1RQ04912 1400 aa20.3■□□□□ 0.84
PTPN23-205ENST00000495653 WAPLQ7Z5K2 1190 aa20.3■□□□□ 0.84
PTPN23-205ENST00000495653 STAC3Q96MF2 364 aa20.3■□□□□ 0.84
PTPN23-205ENST00000495653 PLEKHH1Q9ULM0 1364 aa20.3■□□□□ 0.84
PTPN23-205ENST00000495653 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
PTPN23-205ENST00000495653 PHLPP1O60346 1717 aa20.28■□□□□ 0.84
PTPN23-205ENST00000495653 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
PTPN23-205ENST00000495653 BRINP3Q76B58 766 aa20.25■□□□□ 0.83
PTPN23-205ENST00000495653 DLC1Q96QB1 1528 aa20.24■□□□□ 0.83
PTPN23-205ENST00000495653 L3MBTL2Q969R5 705 aa20.24■□□□□ 0.83
PTPN23-205ENST00000495653 KIAA1210Q9ULL0 1709 aa20.23■□□□□ 0.83
PTPN23-205ENST00000495653 COL16A1Q07092 1604 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms