RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 NPATQ14207 1427 aa19.99■□□□□ 0.79
CHTOP-206ENST00000495554 WASHC2CQ9Y4E1 1318 aa19.99■□□□□ 0.79
CHTOP-206ENST00000495554 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
CHTOP-206ENST00000495554 TMF1P82094 1093 aa19.98■□□□□ 0.79
CHTOP-206ENST00000495554 LRPPRCP42704 1394 aaKnown RBP19.98■□□□□ 0.79
CHTOP-206ENST00000495554 PARD3Q8TEW0 1356 aa19.97■□□□□ 0.79
CHTOP-206ENST00000495554 RICTORQ6R327 1708 aa19.97■□□□□ 0.79
CHTOP-206ENST00000495554 IQGAP1P46940 1657 aa19.97■□□□□ 0.79
CHTOP-206ENST00000495554 DIP2CQ9Y2E4 1556 aa19.97■□□□□ 0.79
CHTOP-206ENST00000495554 KIF1BO60333 1816 aa19.96■□□□□ 0.79
CHTOP-206ENST00000495554 ADGRF5Q8IZF2 1346 aa19.96■□□□□ 0.79
CHTOP-206ENST00000495554 NLRP13Q86W25 1043 aa19.95■□□□□ 0.78
CHTOP-206ENST00000495554 CFAP65Q6ZU64 1925 aaKnown RBP19.95■□□□□ 0.78
CHTOP-206ENST00000495554 ABCC3O15438 1527 aa19.95■□□□□ 0.78
CHTOP-206ENST00000495554 PPP4R2Q9NY27 417 aa19.94■□□□□ 0.78
CHTOP-206ENST00000495554 SCAF11Q99590 1463 aaKnown RBP19.94■□□□□ 0.78
CHTOP-206ENST00000495554 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
CHTOP-206ENST00000495554 MYOM2P54296 1465 aa19.94■□□□□ 0.78
CHTOP-206ENST00000495554 FAM69CQ0P6D2 419 aa19.93■□□□□ 0.78
CHTOP-206ENST00000495554 CFAP70Q5T0N1 1121 aa19.93■□□□□ 0.78
CHTOP-206ENST00000495554 MROH2AA6NES4 1674 aa19.93■□□□□ 0.78
CHTOP-206ENST00000495554 YEATS2Q9ULM3 1422 aa19.93■□□□□ 0.78
CHTOP-206ENST00000495554 KIAA1210Q9ULL0 1709 aa19.92■□□□□ 0.78
CHTOP-206ENST00000495554 IFT172Q9UG01 1749 aa19.92■□□□□ 0.78
CHTOP-206ENST00000495554 PANK3Q9H999 370 aa19.91■□□□□ 0.78
CHTOP-206ENST00000495554 PLEKHG5O94827 1062 aa19.9■□□□□ 0.78
CHTOP-206ENST00000495554 ADGRB3O60242 1522 aa19.9■□□□□ 0.78
CHTOP-206ENST00000495554 NRXN1Q9ULB1 1477 aa19.9■□□□□ 0.78
CHTOP-206ENST00000495554 DIP2BQ9P265 1576 aa19.89■□□□□ 0.77
CHTOP-206ENST00000495554 NOS1P29475 1434 aa19.88■□□□□ 0.77
CHTOP-206ENST00000495554 CHGAP10645 457 aaKnown RBP19.87■□□□□ 0.77
CHTOP-206ENST00000495554 SIGLEC1Q9BZZ2 1709 aa19.87■□□□□ 0.77
CHTOP-206ENST00000495554 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
CHTOP-206ENST00000495554 CDCA8Q53HL2 280 aa19.87■□□□□ 0.77
CHTOP-206ENST00000495554 RNF123Q5XPI4 1314 aa19.85■□□□□ 0.77
CHTOP-206ENST00000495554 ANP32EQ9BTT0 268 aa19.85■□□□□ 0.77
CHTOP-206ENST00000495554 CC2D1BQ5T0F9 858 aaKnown RBP19.85■□□□□ 0.77
CHTOP-206ENST00000495554 ARHGAP31Q2M1Z3 1444 aa19.84■□□□□ 0.77
CHTOP-206ENST00000495554 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.77
CHTOP-206ENST00000495554 RBM19Q9Y4C8 960 aaKnown RBP19.83■□□□□ 0.77
CHTOP-206ENST00000495554 ZMYM4Q5VZL5 1548 aa19.82■□□□□ 0.76
CHTOP-206ENST00000495554 INSRP06213 1382 aa19.82■□□□□ 0.76
CHTOP-206ENST00000495554 SYNMO15061 1565 aa19.81■□□□□ 0.76
CHTOP-206ENST00000495554 PPLO60437 1756 aa19.81■□□□□ 0.76
CHTOP-206ENST00000495554 RPGRIP1LQ68CZ1 1315 aa19.81■□□□□ 0.76
CHTOP-206ENST00000495554 C14orf93Q9H972 538 aaKnown RBP19.81■□□□□ 0.76
CHTOP-206ENST00000495554 PIK3C2BO00750 1634 aa19.8■□□□□ 0.76
CHTOP-206ENST00000495554 TSPOAP1O95153 1857 aa19.79■□□□□ 0.76
CHTOP-206ENST00000495554 PIK3C2GO75747 1445 aa19.79■□□□□ 0.76
CHTOP-206ENST00000495554 SENP3-EIF4A1A0A087X0R7 540 aa19.78■□□□□ 0.76
CHTOP-206ENST00000495554 IDI1Q13907 227 aa19.78■□□□□ 0.76
CHTOP-206ENST00000495554 KNSTRNQ9Y448 316 aa19.78■□□□□ 0.76
CHTOP-206ENST00000495554 ZC3H13Q5T200 1668 aaKnown RBP19.77■□□□□ 0.76
CHTOP-206ENST00000495554 PDE3BQ13370 1112 aa19.77■□□□□ 0.76
CHTOP-206ENST00000495554 B4GALNT3Q6L9W6 998 aa19.77■□□□□ 0.75
CHTOP-206ENST00000495554 SETBP1Q9Y6X0 1596 aa19.77■□□□□ 0.75
CHTOP-206ENST00000495554 ERVK-7P63135 1459 aa19.76■□□□□ 0.75
CHTOP-206ENST00000495554 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
CHTOP-206ENST00000495554 UBE2Q2Q8WVN8 375 aa19.75■□□□□ 0.75
CHTOP-206ENST00000495554 ADGRB1O14514 1584 aa19.74■□□□□ 0.75
CHTOP-206ENST00000495554 MYOM1P52179 1685 aa19.74■□□□□ 0.75
CHTOP-206ENST00000495554 TMEM132EQ6IEE7 984 aa19.73■□□□□ 0.75
CHTOP-206ENST00000495554 SLC52A1Q9NWF4 448 aa19.73■□□□□ 0.75
CHTOP-206ENST00000495554 BLMP54132 1417 aaPredicted RBP19.73■□□□□ 0.75
CHTOP-206ENST00000495554 SBNO2Q9Y2G9 1366 aa19.72■□□□□ 0.75
CHTOP-206ENST00000495554 MYO3AQ8NEV4 1616 aa19.72■□□□□ 0.75
CHTOP-206ENST00000495554 NUTM2DQ5VT03 806 aaPredicted RBP19.72■□□□□ 0.75
CHTOP-206ENST00000495554 NEXMIFQ5QGS0 1516 aa19.72■□□□□ 0.75
CHTOP-206ENST00000495554 TRAK1Q9UPV9 953 aa19.72■□□□□ 0.75
CHTOP-206ENST00000495554 VGFO15240 615 aaPredicted RBP19.71■□□□□ 0.75
CHTOP-206ENST00000495554 FBXO31Q5XUX0 539 aaPredicted RBP19.7■□□□□ 0.74
CHTOP-206ENST00000495554 CENPJQ9HC77 1338 aaPredicted RBP19.7■□□□□ 0.74
CHTOP-206ENST00000495554 NPC1L1Q9UHC9 1359 aa19.7■□□□□ 0.74
CHTOP-206ENST00000495554 KDM5AP29375 1690 aaKnown RBP19.7■□□□□ 0.74
CHTOP-206ENST00000495554 ASXL1Q8IXJ9 1541 aa19.69■□□□□ 0.74
CHTOP-206ENST00000495554 PPP2R1AP30153 589 aa19.69■□□□□ 0.74
CHTOP-206ENST00000495554 PREX1Q8TCU6 1659 aa19.69■□□□□ 0.74
CHTOP-206ENST00000495554 REREQ9P2R6 1566 aa19.68■□□□□ 0.74
CHTOP-206ENST00000495554 SALL2Q9Y467 1007 aaPredicted RBP19.68■□□□□ 0.74
CHTOP-206ENST00000495554 AGLP35573 1532 aa19.68■□□□□ 0.74
CHTOP-206ENST00000495554 RCAN3Q9UKA8 241 aa19.66■□□□□ 0.74
CHTOP-206ENST00000495554 KIF13AQ9H1H9 1805 aa19.66■□□□□ 0.74
CHTOP-206ENST00000495554 CARD14Q9BXL6 1004 aa19.66■□□□□ 0.74
CHTOP-206ENST00000495554 ZFYVE9O95405 1425 aa19.66■□□□□ 0.74
CHTOP-206ENST00000495554 PPP6R1Q9UPN7 881 aa19.65■□□□□ 0.74
CHTOP-206ENST00000495554 CCDC136Q96JN2 1154 aa19.65■□□□□ 0.74
CHTOP-206ENST00000495554 TMEM131LA2VDJ0 1609 aa19.65■□□□□ 0.74
CHTOP-206ENST00000495554 RRP1P56182 461 aaKnown RBP19.64■□□□□ 0.73
CHTOP-206ENST00000495554 MYO5BQ9ULV0 1848 aa19.64■□□□□ 0.73
CHTOP-206ENST00000495554 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.73
CHTOP-206ENST00000495554 WDR43Q15061 677 aaKnown RBP eCLIP19.62■□□□□ 0.737e-6■■■■■ 27.3
CHTOP-206ENST00000495554 CDCA7LQ96GN5 454 aa19.61■□□□□ 0.73
CHTOP-206ENST00000495554 QRICH2Q9H0J4 1663 aa19.6■□□□□ 0.73
CHTOP-206ENST00000495554 FANCIQ9NVI1 1328 aa19.6■□□□□ 0.73
CHTOP-206ENST00000495554 ANO8Q9HCE9 1232 aaPredicted RBP19.59■□□□□ 0.73
CHTOP-206ENST00000495554 SLC12A5Q9H2X9 1139 aa19.58■□□□□ 0.72
CHTOP-206ENST00000495554 MLECQ14165 292 aa19.57■□□□□ 0.72
CHTOP-206ENST00000495554 ARHGEF28Q8N1W1 1705 aaKnown RBP19.57■□□□□ 0.72
CHTOP-206ENST00000495554 CLTCQ00610 1675 aaKnown RBP19.57■□□□□ 0.72
CHTOP-206ENST00000495554 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms