RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
FDPS-219ENST00000495308 NEXMIFQ5QGS0 1516 aa20.04■□□□□ 0.8
FDPS-219ENST00000495308 NUTM2DQ5VT03 806 aaPredicted RBP20.04■□□□□ 0.8
FDPS-219ENST00000495308 SENP3Q9H4L4 574 aaPredicted RBP20.04■□□□□ 0.8
FDPS-219ENST00000495308 PPLO60437 1756 aa20.03■□□□□ 0.8
FDPS-219ENST00000495308 ZNF326Q5BKZ1 582 aaKnown RBP20.03■□□□□ 0.8
FDPS-219ENST00000495308 STRCP1A6NGW2 1772 aa20.02■□□□□ 0.8
FDPS-219ENST00000495308 LTBP4Q8N2S1 1624 aa20.02■□□□□ 0.79
FDPS-219ENST00000495308 PPP1R15AO75807 674 aaPredicted RBP20.01■□□□□ 0.79
FDPS-219ENST00000495308 IFT172Q9UG01 1749 aa20.01■□□□□ 0.79
FDPS-219ENST00000495308 ZNF335Q9H4Z2 1342 aaPredicted RBP20.01■□□□□ 0.79
FDPS-219ENST00000495308 ANKRD30BQ9BXX2 1392 aa20■□□□□ 0.79
FDPS-219ENST00000495308 PLEKHG1Q9ULL1 1385 aa19.98■□□□□ 0.79
FDPS-219ENST00000495308 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.98■□□□□ 0.79
FDPS-219ENST00000495308 SPATA31E1Q6ZUB1 1445 aa19.98■□□□□ 0.79
FDPS-219ENST00000495308 NRXN3Q9Y4C0 1643 aa19.98■□□□□ 0.79
FDPS-219ENST00000495308 HDGFP51858 240 aaKnown RBP19.97■□□□□ 0.79
FDPS-219ENST00000495308 BCANQ96GW7 911 aa19.96■□□□□ 0.79
FDPS-219ENST00000495308 SLC26A8Q96RN1 970 aa19.96■□□□□ 0.79
FDPS-219ENST00000495308 RGL3Q3MIN7 710 aa19.94■□□□□ 0.78
FDPS-219ENST00000495308 SETBP1Q9Y6X0 1596 aa19.93■□□□□ 0.78
FDPS-219ENST00000495308 DIP2AQ14689 1571 aa19.92■□□□□ 0.78
FDPS-219ENST00000495308 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
FDPS-219ENST00000495308 CHD2O14647 1828 aaKnown RBP19.92■□□□□ 0.78
FDPS-219ENST00000495308 ADAMTS13Q76LX8 1427 aa19.92■□□□□ 0.78
FDPS-219ENST00000495308 DHX57Q6P158 1386 aaKnown RBP19.91■□□□□ 0.78
FDPS-219ENST00000495308 SETD1AO15047 1707 aaKnown RBP19.9■□□□□ 0.78
FDPS-219ENST00000495308 CPS1P31327 1500 aa19.9■□□□□ 0.78
FDPS-219ENST00000495308 NWD1Q149M9 1564 aa19.89■□□□□ 0.77
FDPS-219ENST00000495308 RPGRIP1LQ68CZ1 1315 aa19.89■□□□□ 0.77
FDPS-219ENST00000495308 CERKQ8TCT0 537 aa19.89■□□□□ 0.77
FDPS-219ENST00000495308 XIRP1Q702N8 1843 aaKnown RBP19.88■□□□□ 0.77
FDPS-219ENST00000495308 VGFO15240 615 aaPredicted RBP19.85■□□□□ 0.77
FDPS-219ENST00000495308 ALKQ9UM73 1620 aa19.84■□□□□ 0.77
FDPS-219ENST00000495308 TBX22Q9Y458 520 aa19.84■□□□□ 0.77
FDPS-219ENST00000495308 ADGRF5Q8IZF2 1346 aa19.83■□□□□ 0.77
FDPS-219ENST00000495308 LRRC7Q96NW7 1537 aa19.83■□□□□ 0.77
FDPS-219ENST00000495308 MYOM2P54296 1465 aa19.82■□□□□ 0.76
FDPS-219ENST00000495308 IQSEC2Q5JU85 1478 aa19.82■□□□□ 0.76
FDPS-219ENST00000495308 XRN1Q8IZH2 1706 aaKnown RBP19.82■□□□□ 0.76
FDPS-219ENST00000495308 KCNA6P17658 529 aa19.81■□□□□ 0.76
FDPS-219ENST00000495308 PTPRUQ92729 1446 aa19.81■□□□□ 0.76
FDPS-219ENST00000495308 METP08581 1390 aa19.81■□□□□ 0.76
FDPS-219ENST00000495308 NKTRP30414 1462 aaKnown RBP19.8■□□□□ 0.76
FDPS-219ENST00000495308 PIK3C2GO75747 1445 aa19.79■□□□□ 0.76
FDPS-219ENST00000495308 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
FDPS-219ENST00000495308 PIK3R4Q99570 1358 aa19.79■□□□□ 0.76
FDPS-219ENST00000495308 NRXN1Q9ULB1 1477 aa19.79■□□□□ 0.76
FDPS-219ENST00000495308 LAMC1P11047 1609 aa19.77■□□□□ 0.76
FDPS-219ENST00000495308 RBM33Q96EV2 1170 aaKnown RBP19.76■□□□□ 0.75
FDPS-219ENST00000495308 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
FDPS-219ENST00000495308 DCAF11Q8TEB1 546 aa19.75■□□□□ 0.75
FDPS-219ENST00000495308 KDM2AQ9Y2K7 1162 aa19.75■□□□□ 0.75
FDPS-219ENST00000495308 NEUROD1Q13562 356 aa19.74■□□□□ 0.75
FDPS-219ENST00000495308 AMOTL2Q9Y2J4 779 aa19.74■□□□□ 0.75
FDPS-219ENST00000495308 TMEM94Q12767 1356 aa19.73■□□□□ 0.75
FDPS-219ENST00000495308 PROSER2Q86WR7 435 aaPredicted RBP19.73■□□□□ 0.75
FDPS-219ENST00000495308 FBXO41Q8TF61 875 aa19.71■□□□□ 0.75
FDPS-219ENST00000495308 KNDC1Q76NI1 1749 aa19.71■□□□□ 0.75
FDPS-219ENST00000495308 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
FDPS-219ENST00000495308 UBAP1LF5GYI3 381 aa19.68■□□□□ 0.74
FDPS-219ENST00000495308 CFAP70Q5T0N1 1121 aa19.68■□□□□ 0.74
FDPS-219ENST00000495308 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
FDPS-219ENST00000495308 ILDR1Q86SU0 546 aaPredicted RBP19.68■□□□□ 0.74
FDPS-219ENST00000495308 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.68■□□□□ 0.74
FDPS-219ENST00000495308 KIAA1210Q9ULL0 1709 aa19.66■□□□□ 0.74
FDPS-219ENST00000495308 C14orf93Q9H972 538 aaKnown RBP19.66■□□□□ 0.74
FDPS-219ENST00000495308 PTCH1Q13635 1447 aa19.66■□□□□ 0.74
FDPS-219ENST00000495308 L3MBTL2Q969R5 705 aa19.65■□□□□ 0.74
FDPS-219ENST00000495308 ADGRB1O14514 1584 aa19.65■□□□□ 0.74
FDPS-219ENST00000495308 STK26Q9P289 416 aa19.64■□□□□ 0.73
FDPS-219ENST00000495308 ROBO2Q9HCK4 1378 aa19.64■□□□□ 0.73
FDPS-219ENST00000495308 PRAG1Q86YV5 1406 aa19.64■□□□□ 0.73
FDPS-219ENST00000495308 YTHDC2Q9H6S0 1430 aaKnown RBP19.64■□□□□ 0.73
FDPS-219ENST00000495308 LRPPRCP42704 1394 aaKnown RBP19.63■□□□□ 0.73
FDPS-219ENST00000495308 C14orf37Q86TY3 774 aa19.63■□□□□ 0.73
FDPS-219ENST00000495308 STAC3Q96MF2 364 aa19.63■□□□□ 0.73
FDPS-219ENST00000495308 MSH6P52701 1360 aa19.62■□□□□ 0.73
FDPS-219ENST00000495308 TECPR2O15040 1411 aa19.61■□□□□ 0.73
FDPS-219ENST00000495308 NCOA3Q9Y6Q9 1424 aa19.61■□□□□ 0.73
FDPS-219ENST00000495308 TOM1O60784 492 aa19.61■□□□□ 0.73
FDPS-219ENST00000495308 TONSLQ96HA7 1378 aa19.6■□□□□ 0.73
FDPS-219ENST00000495308 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
FDPS-219ENST00000495308 PIP4K2BP78356 416 aa19.6■□□□□ 0.73
FDPS-219ENST00000495308 TRPM1Q7Z4N2 1603 aa19.6■□□□□ 0.73
FDPS-219ENST00000495308 ARHGEF28Q8N1W1 1705 aaKnown RBP19.59■□□□□ 0.73
FDPS-219ENST00000495308 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
FDPS-219ENST00000495308 ABCC11Q96J66 1382 aa19.58■□□□□ 0.73
FDPS-219ENST00000495308 PLEKHH1Q9ULM0 1364 aa19.57■□□□□ 0.72
FDPS-219ENST00000495308 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
FDPS-219ENST00000495308 DLC1Q96QB1 1528 aa19.56■□□□□ 0.72
FDPS-219ENST00000495308 WAPLQ7Z5K2 1190 aa19.55■□□□□ 0.72
FDPS-219ENST00000495308 CCER1Q8TC90 406 aaPredicted RBP19.55■□□□□ 0.72
FDPS-219ENST00000495308 C19orf44Q9H6X5 657 aa19.54■□□□□ 0.72
FDPS-219ENST00000495308 DCCP43146 1447 aa19.53■□□□□ 0.72
FDPS-219ENST00000495308 NBPF1Q3BBV0 1214 aa19.53■□□□□ 0.72
FDPS-219ENST00000495308 TRAK1Q9UPV9 953 aa19.53■□□□□ 0.72
FDPS-219ENST00000495308 FAM135BQ49AJ0 1406 aa19.52■□□□□ 0.72
FDPS-219ENST00000495308 ATF3P18847 181 aa19.52■□□□□ 0.72
FDPS-219ENST00000495308 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms