RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 STAC3Q96MF2 364 aa14.76□□□□□ -0.05
PRPF4B-209ENST00000494674 PREX1Q8TCU6 1659 aa14.75□□□□□ -0.05
PRPF4B-209ENST00000494674 PRKRIP1Q9H875 184 aaPredicted RBP14.75□□□□□ -0.05
PRPF4B-209ENST00000494674 AGLP35573 1532 aa14.74□□□□□ -0.05
PRPF4B-209ENST00000494674 TESK2Q96S53 571 aa14.74□□□□□ -0.05
PRPF4B-209ENST00000494674 WASHC2CQ9Y4E1 1318 aa14.74□□□□□ -0.05
PRPF4B-209ENST00000494674 ARHGEF40Q8TER5 1519 aa14.73□□□□□ -0.05
PRPF4B-209ENST00000494674 GTF3C3Q9Y5Q9 886 aa14.73□□□□□ -0.05
PRPF4B-209ENST00000494674 MYO5BQ9ULV0 1848 aa14.71□□□□□ -0.05
PRPF4B-209ENST00000494674 DISP3Q9P2K9 1392 aa14.71□□□□□ -0.05
PRPF4B-209ENST00000494674 SCAF11Q99590 1463 aaKnown RBP14.71□□□□□ -0.05
PRPF4B-209ENST00000494674 SETBP1Q9Y6X0 1596 aa14.69□□□□□ -0.06
PRPF4B-209ENST00000494674 ADGRF5Q8IZF2 1346 aa14.69□□□□□ -0.06
PRPF4B-209ENST00000494674 CCDC184Q52MB2 194 aa14.69□□□□□ -0.06
PRPF4B-209ENST00000494674 MYO3AQ8NEV4 1616 aa14.68□□□□□ -0.06
PRPF4B-209ENST00000494674 NEXMIFQ5QGS0 1516 aa14.68□□□□□ -0.06
PRPF4B-209ENST00000494674 PIAS4Q8N2W9 510 aaPredicted RBP14.68□□□□□ -0.06
PRPF4B-209ENST00000494674 CLTCQ00610 1675 aaKnown RBP14.68□□□□□ -0.06
PRPF4B-209ENST00000494674 PIK3C2GO75747 1445 aa14.67□□□□□ -0.06
PRPF4B-209ENST00000494674 POLR3GLQ9BT43 218 aa14.66□□□□□ -0.06
PRPF4B-209ENST00000494674 TMEM131LA2VDJ0 1609 aa14.66□□□□□ -0.06
PRPF4B-209ENST00000494674 MYOM1P52179 1685 aa14.66□□□□□ -0.06
PRPF4B-209ENST00000494674 ADGRB1O14514 1584 aa14.65□□□□□ -0.06
PRPF4B-209ENST00000494674 ERVK-7P63135 1459 aa14.64□□□□□ -0.07
PRPF4B-209ENST00000494674 CFAP70Q5T0N1 1121 aa14.63□□□□□ -0.07
PRPF4B-209ENST00000494674 RPGRIP1LQ68CZ1 1315 aa14.62□□□□□ -0.07
PRPF4B-209ENST00000494674 SPATA31D1Q6ZQQ2 1576 aa14.61□□□□□ -0.07
PRPF4B-209ENST00000494674 KDM5AP29375 1690 aaKnown RBP14.61□□□□□ -0.07
PRPF4B-209ENST00000494674 TMF1P82094 1093 aa14.61□□□□□ -0.07
PRPF4B-209ENST00000494674 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
PRPF4B-209ENST00000494674 PER1O15534 1290 aaPredicted RBP14.59□□□□□ -0.07
PRPF4B-209ENST00000494674 CHGAP10645 457 aaKnown RBP14.59□□□□□ -0.07
PRPF4B-209ENST00000494674 IDI1Q13907 227 aa14.59□□□□□ -0.07
PRPF4B-209ENST00000494674 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
PRPF4B-209ENST00000494674 ZFYVE9O95405 1425 aa14.59□□□□□ -0.07
PRPF4B-209ENST00000494674 QRICH2Q9H0J4 1663 aa14.59□□□□□ -0.07
PRPF4B-209ENST00000494674 KTN1Q86UP2 1357 aaKnown RBP14.58□□□□□ -0.07
PRPF4B-209ENST00000494674 MRS2Q9HD23 443 aa14.58□□□□□ -0.07
PRPF4B-209ENST00000494674 SLC52A1Q9NWF4 448 aa14.58□□□□□ -0.07
PRPF4B-209ENST00000494674 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.08
PRPF4B-209ENST00000494674 C14orf93Q9H972 538 aaKnown RBP14.58□□□□□ -0.08
PRPF4B-209ENST00000494674 PARD3Q8TEW0 1356 aa14.57□□□□□ -0.08
PRPF4B-209ENST00000494674 SBNO2Q9Y2G9 1366 aa14.57□□□□□ -0.08
PRPF4B-209ENST00000494674 ASXL1Q8IXJ9 1541 aa14.57□□□□□ -0.08
PRPF4B-209ENST00000494674 FBXO31Q5XUX0 539 aaPredicted RBP14.56□□□□□ -0.08
PRPF4B-209ENST00000494674 HNRNPUQ00839 825 aaKnown RBP eCLIP14.53□□□□□ -0.08
PRPF4B-209ENST00000494674 RALBP1Q15311 655 aa14.53□□□□□ -0.08
PRPF4B-209ENST00000494674 PANK3Q9H999 370 aa14.52□□□□□ -0.08
PRPF4B-209ENST00000494674 MYBBP1AQ9BQG0 1328 aaKnown RBP14.52□□□□□ -0.08
PRPF4B-209ENST00000494674 SETD1AO15047 1707 aaKnown RBP14.52□□□□□ -0.09
PRPF4B-209ENST00000494674 A2ML1A8K2U0 1454 aa14.51□□□□□ -0.09
PRPF4B-209ENST00000494674 BRD4O60885 1362 aaPredicted RBP14.51□□□□□ -0.09
PRPF4B-209ENST00000494674 VGFO15240 615 aaPredicted RBP14.51□□□□□ -0.09
PRPF4B-209ENST00000494674 CNGB1Q14028 1251 aaPredicted RBP14.51□□□□□ -0.09
PRPF4B-209ENST00000494674 CDCA8Q53HL2 280 aa14.5□□□□□ -0.09
PRPF4B-209ENST00000494674 FAM9BQ8IZU0 186 aa14.5□□□□□ -0.09
PRPF4B-209ENST00000494674 NUTM2DQ5VT03 806 aaPredicted RBP14.49□□□□□ -0.09
PRPF4B-209ENST00000494674 LRPPRCP42704 1394 aaKnown RBP14.49□□□□□ -0.09
PRPF4B-209ENST00000494674 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
PRPF4B-209ENST00000494674 MLECQ14165 292 aa14.48□□□□□ -0.09
PRPF4B-209ENST00000494674 TMEM132EQ6IEE7 984 aa14.48□□□□□ -0.09
PRPF4B-209ENST00000494674 POTEHQ6S545 545 aa14.48□□□□□ -0.09
PRPF4B-209ENST00000494674 PNISRQ8TF01 805 aaKnown RBP14.48□□□□□ -0.09
PRPF4B-209ENST00000494674 ALKQ9UM73 1620 aa14.48□□□□□ -0.09
PRPF4B-209ENST00000494674 TULP4Q9NRJ4 1543 aa14.47□□□□□ -0.09
PRPF4B-209ENST00000494674 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
PRPF4B-209ENST00000494674 TRAK1Q9UPV9 953 aa14.46□□□□□ -0.09
PRPF4B-209ENST00000494674 NRXN3Q9Y4C0 1643 aa14.46□□□□□ -0.09
PRPF4B-209ENST00000494674 ZMYM3Q14202 1370 aa14.46□□□□□ -0.09
PRPF4B-209ENST00000494674 ZBED9Q6R2W3 1325 aa14.46□□□□□ -0.09
PRPF4B-209ENST00000494674 PTPRMP28827 1452 aa14.45□□□□□ -0.1
PRPF4B-209ENST00000494674 AMER1Q5JTC6 1135 aaPredicted RBP14.45□□□□□ -0.1
PRPF4B-209ENST00000494674 NLRP13Q86W25 1043 aa14.45□□□□□ -0.1
PRPF4B-209ENST00000494674 UBR1Q8IWV7 1749 aa14.45□□□□□ -0.1
PRPF4B-209ENST00000494674 NPC1L1Q9UHC9 1359 aa14.44□□□□□ -0.1
PRPF4B-209ENST00000494674 CC2D1BQ5T0F9 858 aaKnown RBP14.44□□□□□ -0.1
PRPF4B-209ENST00000494674 TMC1Q8TDI8 760 aa14.44□□□□□ -0.1
PRPF4B-209ENST00000494674 SUPT16HQ9Y5B9 1047 aaKnown RBP14.44□□□□□ -0.1
PRPF4B-209ENST00000494674 RIMS2Q9UQ26 1411 aa14.42□□□□□ -0.1
PRPF4B-209ENST00000494674 USP32Q8NFA0 1604 aa14.42□□□□□ -0.1
PRPF4B-209ENST00000494674 C3P01024 1663 aa14.41□□□□□ -0.1
PRPF4B-209ENST00000494674 YTHDC2Q9H6S0 1430 aaKnown RBP14.41□□□□□ -0.1
PRPF4B-209ENST00000494674 FER1L4A9Z1Z3 1794 aa14.41□□□□□ -0.1
PRPF4B-209ENST00000494674 TNRQ92752 1358 aa14.4□□□□□ -0.1
PRPF4B-209ENST00000494674 KNSTRNQ9Y448 316 aa14.4□□□□□ -0.1
PRPF4B-209ENST00000494674 CARD14Q9BXL6 1004 aa14.39□□□□□ -0.11
PRPF4B-209ENST00000494674 DLC1Q96QB1 1528 aa14.39□□□□□ -0.11
PRPF4B-209ENST00000494674 KNDC1Q76NI1 1749 aa14.37□□□□□ -0.11
PRPF4B-209ENST00000494674 INSRP06213 1382 aa14.37□□□□□ -0.11
PRPF4B-209ENST00000494674 PUS7Q96PZ0 661 aaKnown RBP14.37□□□□□ -0.11
PRPF4B-209ENST00000494674 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
PRPF4B-209ENST00000494674 BLMP54132 1417 aaPredicted RBP14.36□□□□□ -0.11
PRPF4B-209ENST00000494674 ESF1Q9H501 851 aaKnown RBP14.36□□□□□ -0.11
PRPF4B-209ENST00000494674 PPP2R1AP30153 589 aa14.35□□□□□ -0.11
PRPF4B-209ENST00000494674 STK26Q9P289 416 aa14.34□□□□□ -0.11
PRPF4B-209ENST00000494674 EVC2Q86UK5 1308 aa14.34□□□□□ -0.11
PRPF4B-209ENST00000494674 SMG6Q86US8 1419 aaKnown RBP14.34□□□□□ -0.11
PRPF4B-209ENST00000494674 NLRP1Q9C000 1473 aa14.34□□□□□ -0.11
PRPF4B-209ENST00000494674 NSD3Q9BZ95 1437 aa14.33□□□□□ -0.12
PRPF4B-209ENST00000494674 SLC12A5Q9H2X9 1139 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms