RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
COL1A1-208ENST00000494334 NUTM2DQ5VT03 806 aaPredicted RBP19.92■□□□□ 0.78
COL1A1-208ENST00000494334 MYO5BQ9ULV0 1848 aa19.92■□□□□ 0.78
COL1A1-208ENST00000494334 ANKRD30BQ9BXX2 1392 aa19.92■□□□□ 0.78
COL1A1-208ENST00000494334 PPP1R15AO75807 674 aaPredicted RBP19.9■□□□□ 0.78
COL1A1-208ENST00000494334 ZNF335Q9H4Z2 1342 aaPredicted RBP19.89■□□□□ 0.77
COL1A1-208ENST00000494334 IQGAP1P46940 1657 aa19.87■□□□□ 0.77
COL1A1-208ENST00000494334 PLEKHG1Q9ULL1 1385 aa19.87■□□□□ 0.77
COL1A1-208ENST00000494334 BCANQ96GW7 911 aa19.87■□□□□ 0.77
COL1A1-208ENST00000494334 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
COL1A1-208ENST00000494334 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
COL1A1-208ENST00000494334 KIF1BO60333 1816 aa19.86■□□□□ 0.77
COL1A1-208ENST00000494334 RPGRIP1LQ68CZ1 1315 aa19.86■□□□□ 0.77
COL1A1-208ENST00000494334 RGL3Q3MIN7 710 aa19.86■□□□□ 0.77
COL1A1-208ENST00000494334 SLC26A8Q96RN1 970 aa19.86■□□□□ 0.77
COL1A1-208ENST00000494334 SPATA31E1Q6ZUB1 1445 aa19.85■□□□□ 0.77
COL1A1-208ENST00000494334 NEXMIFQ5QGS0 1516 aa19.83■□□□□ 0.77
COL1A1-208ENST00000494334 LTBP4Q8N2S1 1624 aa19.82■□□□□ 0.76
COL1A1-208ENST00000494334 DHX57Q6P158 1386 aaKnown RBP19.82■□□□□ 0.76
COL1A1-208ENST00000494334 VGFO15240 615 aaPredicted RBP19.81■□□□□ 0.76
COL1A1-208ENST00000494334 CERKQ8TCT0 537 aa19.8■□□□□ 0.76
COL1A1-208ENST00000494334 TBX22Q9Y458 520 aa19.8■□□□□ 0.76
COL1A1-208ENST00000494334 ADAMTS13Q76LX8 1427 aa19.79■□□□□ 0.76
COL1A1-208ENST00000494334 KCNA6P17658 529 aa19.76■□□□□ 0.75
COL1A1-208ENST00000494334 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
COL1A1-208ENST00000494334 SETBP1Q9Y6X0 1596 aa19.73■□□□□ 0.75
COL1A1-208ENST00000494334 PPLO60437 1756 aa19.72■□□□□ 0.75
COL1A1-208ENST00000494334 CPS1P31327 1500 aa19.72■□□□□ 0.75
COL1A1-208ENST00000494334 SIN3AQ96ST3 1273 aa19.72■□□□□ 0.75
COL1A1-208ENST00000494334 NRXN3Q9Y4C0 1643 aa19.72■□□□□ 0.75
COL1A1-208ENST00000494334 DIP2AQ14689 1571 aa19.7■□□□□ 0.74
COL1A1-208ENST00000494334 STRCP1A6NGW2 1772 aa19.7■□□□□ 0.74
COL1A1-208ENST00000494334 METP08581 1390 aa19.7■□□□□ 0.74
COL1A1-208ENST00000494334 PIK3R4Q99570 1358 aa19.7■□□□□ 0.74
COL1A1-208ENST00000494334 DCAF11Q8TEB1 546 aa19.69■□□□□ 0.74
COL1A1-208ENST00000494334 LRRC7Q96NW7 1537 aa19.67■□□□□ 0.74
COL1A1-208ENST00000494334 NEUROD1Q13562 356 aa19.67■□□□□ 0.74
COL1A1-208ENST00000494334 AMOTL2Q9Y2J4 779 aa19.67■□□□□ 0.74
COL1A1-208ENST00000494334 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
COL1A1-208ENST00000494334 IFT172Q9UG01 1749 aa19.67■□□□□ 0.74
COL1A1-208ENST00000494334 PTPRUQ92729 1446 aa19.67■□□□□ 0.74
COL1A1-208ENST00000494334 STAC3Q96MF2 364 aa19.66■□□□□ 0.74
COL1A1-208ENST00000494334 PIK3C2GO75747 1445 aa19.66■□□□□ 0.74
COL1A1-208ENST00000494334 MYOM2P54296 1465 aa19.66■□□□□ 0.74
COL1A1-208ENST00000494334 IQSEC2Q5JU85 1478 aa19.66■□□□□ 0.74
COL1A1-208ENST00000494334 ALKQ9UM73 1620 aa19.65■□□□□ 0.74
COL1A1-208ENST00000494334 PROSER2Q86WR7 435 aaPredicted RBP19.65■□□□□ 0.74
COL1A1-208ENST00000494334 NRXN1Q9ULB1 1477 aa19.65■□□□□ 0.74
COL1A1-208ENST00000494334 NWD1Q149M9 1564 aa19.65■□□□□ 0.74
COL1A1-208ENST00000494334 CHD2O14647 1828 aaKnown RBP19.63■□□□□ 0.73
COL1A1-208ENST00000494334 RBM33Q96EV2 1170 aaKnown RBP19.63■□□□□ 0.73
COL1A1-208ENST00000494334 C14orf93Q9H972 538 aaKnown RBP19.63■□□□□ 0.73
COL1A1-208ENST00000494334 NKTRP30414 1462 aaKnown RBP19.62■□□□□ 0.73
COL1A1-208ENST00000494334 TMEM94Q12767 1356 aa19.62■□□□□ 0.73
COL1A1-208ENST00000494334 CFAP70Q5T0N1 1121 aa19.62■□□□□ 0.73
COL1A1-208ENST00000494334 FBXO41Q8TF61 875 aa19.62■□□□□ 0.73
COL1A1-208ENST00000494334 L3MBTL2Q969R5 705 aa19.61■□□□□ 0.73
COL1A1-208ENST00000494334 SETD1AO15047 1707 aaKnown RBP19.59■□□□□ 0.73
COL1A1-208ENST00000494334 TMEM132EQ6IEE7 984 aa19.59■□□□□ 0.73
COL1A1-208ENST00000494334 UBAP1LF5GYI3 381 aa19.56■□□□□ 0.72
COL1A1-208ENST00000494334 ILDR1Q86SU0 546 aaPredicted RBP19.56■□□□□ 0.72
COL1A1-208ENST00000494334 XRN1Q8IZH2 1706 aaKnown RBP19.55■□□□□ 0.72
COL1A1-208ENST00000494334 NCOA3Q9Y6Q9 1424 aa19.54■□□□□ 0.72
COL1A1-208ENST00000494334 TOM1O60784 492 aa19.54■□□□□ 0.72
COL1A1-208ENST00000494334 STK26Q9P289 416 aa19.54■□□□□ 0.72
COL1A1-208ENST00000494334 ASXL1Q8IXJ9 1541 aa19.54■□□□□ 0.72
COL1A1-208ENST00000494334 LRPPRCP42704 1394 aaKnown RBP19.53■□□□□ 0.72
COL1A1-208ENST00000494334 ROBO2Q9HCK4 1378 aa19.53■□□□□ 0.72
COL1A1-208ENST00000494334 XIRP1Q702N8 1843 aaKnown RBP19.53■□□□□ 0.72
COL1A1-208ENST00000494334 ABCC11Q96J66 1382 aa19.52■□□□□ 0.72
COL1A1-208ENST00000494334 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
COL1A1-208ENST00000494334 PRAG1Q86YV5 1406 aa19.51■□□□□ 0.71
COL1A1-208ENST00000494334 YTHDC2Q9H6S0 1430 aaKnown RBP19.51■□□□□ 0.71
COL1A1-208ENST00000494334 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
COL1A1-208ENST00000494334 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
COL1A1-208ENST00000494334 MSH6P52701 1360 aa19.5■□□□□ 0.71
COL1A1-208ENST00000494334 TONSLQ96HA7 1378 aa19.5■□□□□ 0.71
COL1A1-208ENST00000494334 C19orf44Q9H6X5 657 aa19.5■□□□□ 0.71
COL1A1-208ENST00000494334 CCER1Q8TC90 406 aaPredicted RBP19.49■□□□□ 0.71
COL1A1-208ENST00000494334 LAMC1P11047 1609 aa19.49■□□□□ 0.71
COL1A1-208ENST00000494334 TECPR2O15040 1411 aa19.49■□□□□ 0.71
COL1A1-208ENST00000494334 ADGRB1O14514 1584 aa19.48■□□□□ 0.71
COL1A1-208ENST00000494334 PIP4K2BP78356 416 aa19.47■□□□□ 0.71
COL1A1-208ENST00000494334 WAPLQ7Z5K2 1190 aa19.47■□□□□ 0.71
COL1A1-208ENST00000494334 SIRT1Q96EB6 747 aa19.47■□□□□ 0.71
COL1A1-208ENST00000494334 NBPF1Q3BBV0 1214 aa19.46■□□□□ 0.71
COL1A1-208ENST00000494334 NBPF8Q3BBV2 869 aa19.45■□□□□ 0.7
COL1A1-208ENST00000494334 TRAK1Q9UPV9 953 aa19.45■□□□□ 0.7
COL1A1-208ENST00000494334 PLEKHH1Q9ULM0 1364 aa19.44■□□□□ 0.7
COL1A1-208ENST00000494334 CADPS2Q86UW7 1296 aa19.44■□□□□ 0.7
COL1A1-208ENST00000494334 SCAF1Q9H7N4 1312 aaKnown RBP19.44■□□□□ 0.7
COL1A1-208ENST00000494334 ADGRL3Q9HAR2 1447 aa19.43■□□□□ 0.7
COL1A1-208ENST00000494334 ATF3P18847 181 aa19.43■□□□□ 0.7
COL1A1-208ENST00000494334 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
COL1A1-208ENST00000494334 SLAIN2Q9P270 581 aa19.42■□□□□ 0.7
COL1A1-208ENST00000494334 PRAM1Q96QH2 718 aa19.41■□□□□ 0.7
COL1A1-208ENST00000494334 KNDC1Q76NI1 1749 aa19.41■□□□□ 0.7
COL1A1-208ENST00000494334 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.4■□□□□ 0.7
COL1A1-208ENST00000494334 DCCP43146 1447 aa19.4■□□□□ 0.7
COL1A1-208ENST00000494334 DLC1Q96QB1 1528 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms