RNA–Protein interactions for RNA: ENST00000492485.5

TRIOBP-211, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 1 (best)

Gene TRIOBP, Length 3,948 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-211ENST00000492485 ANKRD30BQ9BXX2 1392 aa15.44■□□□□ 0.06
TRIOBP-211ENST00000492485 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
TRIOBP-211ENST00000492485 RILPL2Q969X0 211 aa15.43■□□□□ 0.06
TRIOBP-211ENST00000492485 SPAG9O60271 1321 aaKnown RBP15.43■□□□□ 0.06
TRIOBP-211ENST00000492485 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
TRIOBP-211ENST00000492485 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
TRIOBP-211ENST00000492485 IPO8O15397 1037 aaKnown RBP15.42■□□□□ 0.06
TRIOBP-211ENST00000492485 NCOA1Q15788 1441 aa15.42■□□□□ 0.06
TRIOBP-211ENST00000492485 PCF11O94913 1555 aaKnown RBP15.42■□□□□ 0.06
TRIOBP-211ENST00000492485 EFCAB2Q5VUJ9 269 aa15.42■□□□□ 0.06
TRIOBP-211ENST00000492485 CHMP5Q9NZZ3 219 aa15.42■□□□□ 0.06
TRIOBP-211ENST00000492485 R3HCC1Q9Y3T6 440 aaKnown RBP15.41■□□□□ 0.06
TRIOBP-211ENST00000492485 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
TRIOBP-211ENST00000492485 CAVIN1Q6NZI2 390 aaKnown RBP15.4■□□□□ 0.06
TRIOBP-211ENST00000492485 DRC7Q8IY82 874 aa15.4■□□□□ 0.06
TRIOBP-211ENST00000492485 DUSP27Q5VZP5 1158 aa15.4■□□□□ 0.06
TRIOBP-211ENST00000492485 FGD1P98174 961 aa15.38■□□□□ 0.05
TRIOBP-211ENST00000492485 TBC1D2Q9BYX2 928 aa15.38■□□□□ 0.05
TRIOBP-211ENST00000492485 FAM43AQ8N2R8 423 aa15.38■□□□□ 0.05
TRIOBP-211ENST00000492485 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
TRIOBP-211ENST00000492485 DTNBO60941 627 aa15.37■□□□□ 0.05
TRIOBP-211ENST00000492485 NOB1Q9ULX3 412 aaKnown RBP15.37■□□□□ 0.05
TRIOBP-211ENST00000492485 SLFN5Q08AF3 891 aa15.36■□□□□ 0.05
TRIOBP-211ENST00000492485 MCM4P33991 863 aa15.36■□□□□ 0.05
TRIOBP-211ENST00000492485 WWC1Q8IX03 1113 aa15.35■□□□□ 0.05
TRIOBP-211ENST00000492485 WASHC2CQ9Y4E1 1318 aa15.35■□□□□ 0.05
TRIOBP-211ENST00000492485 RUNDC1Q96C34 613 aa15.35■□□□□ 0.05
TRIOBP-211ENST00000492485 PCDHB15Q9Y5E8 787 aa15.35■□□□□ 0.05
TRIOBP-211ENST00000492485 FYCO1Q9BQS8 1478 aa15.34■□□□□ 0.05
TRIOBP-211ENST00000492485 C8orf34Q49A92 452 aa15.34■□□□□ 0.05
TRIOBP-211ENST00000492485 FBXW7Q969H0 707 aa15.34■□□□□ 0.05
TRIOBP-211ENST00000492485 A0A0U1RQG5 324 aaPredicted RBP15.34■□□□□ 0.05
TRIOBP-211ENST00000492485 GOLGA6L4A6NEF3 574 aa15.34■□□□□ 0.05
TRIOBP-211ENST00000492485 PRPF40AO75400 957 aaKnown RBP15.33■□□□□ 0.05
TRIOBP-211ENST00000492485 DDX11L8A8MPP1 907 aa15.33■□□□□ 0.04
TRIOBP-211ENST00000492485 PRDM2Q13029 1718 aa15.33■□□□□ 0.04
TRIOBP-211ENST00000492485 DISP3Q9P2K9 1392 aa15.32■□□□□ 0.04
TRIOBP-211ENST00000492485 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
TRIOBP-211ENST00000492485 KIAA1107Q9UPP5 1409 aa15.32■□□□□ 0.04
TRIOBP-211ENST00000492485 RLBP1P12271 317 aa15.32■□□□□ 0.04
TRIOBP-211ENST00000492485 NASPP49321 788 aaPredicted RBP15.32■□□□□ 0.04
TRIOBP-211ENST00000492485 HDGFL2Q7Z4V5 671 aaPredicted RBP15.32■□□□□ 0.04
TRIOBP-211ENST00000492485 FOSBP53539 338 aa15.31■□□□□ 0.04
TRIOBP-211ENST00000492485 LARP6Q9BRS8 491 aaKnown RBP15.31■□□□□ 0.04
TRIOBP-211ENST00000492485 ANO2Q9NQ90 1003 aa15.31■□□□□ 0.04
TRIOBP-211ENST00000492485 CARMIL2Q6F5E8 1435 aa15.31■□□□□ 0.04
TRIOBP-211ENST00000492485 DCTN1Q14203 1278 aa15.31■□□□□ 0.04
TRIOBP-211ENST00000492485 DDX19BQ9UMR2 479 aa15.3■□□□□ 0.04
TRIOBP-211ENST00000492485 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
TRIOBP-211ENST00000492485 NUTM2GQ5VZR2 741 aa15.3■□□□□ 0.04
TRIOBP-211ENST00000492485 DAPK1P53355 1430 aa15.3■□□□□ 0.04
TRIOBP-211ENST00000492485 KANK1Q14678 1352 aa15.3■□□□□ 0.04
TRIOBP-211ENST00000492485 CCDC27Q2M243 656 aa15.29■□□□□ 0.04
TRIOBP-211ENST00000492485 TMEM57Q8N5G2 664 aa15.29■□□□□ 0.04
TRIOBP-211ENST00000492485 GRPEL1Q9HAV7 217 aa15.29■□□□□ 0.04
TRIOBP-211ENST00000492485 RTF1Q92541 710 aaKnown RBP15.29■□□□□ 0.04
TRIOBP-211ENST00000492485 ZNF330Q9Y3S2 320 aaPredicted RBP15.29■□□□□ 0.04
TRIOBP-211ENST00000492485 DDX54Q8TDD1 881 aaKnown RBP15.29■□□□□ 0.04
TRIOBP-211ENST00000492485 PKNOX2Q96KN3 472 aa15.29■□□□□ 0.04
TRIOBP-211ENST00000492485 PRDM10Q9NQV6 1147 aa15.29■□□□□ 0.04
TRIOBP-211ENST00000492485 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
TRIOBP-211ENST00000492485 ESPNB1AK53 854 aa15.28■□□□□ 0.04
TRIOBP-211ENST00000492485 PRKAR2BP31323 418 aa15.28■□□□□ 0.04
TRIOBP-211ENST00000492485 MIS18AQ9NYP9 233 aa15.28■□□□□ 0.04
TRIOBP-211ENST00000492485 XRCC6P12956 609 aaKnown RBP eCLIP15.27■□□□□ 0.04
TRIOBP-211ENST00000492485 EIF2S2P20042 333 aaKnown RBP15.27■□□□□ 0.04
TRIOBP-211ENST00000492485 ABCC5O15440 1437 aa15.27■□□□□ 0.04
TRIOBP-211ENST00000492485 KIAA2012Q0VF49 1180 aa15.27■□□□□ 0.04
TRIOBP-211ENST00000492485 SSH1Q8WYL5 1049 aa15.27■□□□□ 0.04
TRIOBP-211ENST00000492485 MAP4K4O95819 1239 aaPredicted RBP15.27■□□□□ 0.03
TRIOBP-211ENST00000492485 MRE11P49959 708 aa15.27■□□□□ 0.03
TRIOBP-211ENST00000492485 TSHZ3Q63HK5 1081 aa15.27■□□□□ 0.03
TRIOBP-211ENST00000492485 RRAGDQ9NQL2 400 aaPredicted RBP15.27■□□□□ 0.03
TRIOBP-211ENST00000492485 PLEKHH1Q9ULM0 1364 aa15.27■□□□□ 0.03
TRIOBP-211ENST00000492485 DIAPH1O60610 1272 aaKnown RBP15.26■□□□□ 0.03
TRIOBP-211ENST00000492485 RARSP54136 660 aaKnown RBP15.26■□□□□ 0.03
TRIOBP-211ENST00000492485 SMARCA5O60264 1052 aaPredicted RBP15.26■□□□□ 0.03
TRIOBP-211ENST00000492485 NGEFQ8N5V2 710 aa15.26■□□□□ 0.03
TRIOBP-211ENST00000492485 KIAA1211Q6ZU35 1233 aa15.25■□□□□ 0.03
TRIOBP-211ENST00000492485 ZNF592Q92610 1267 aa15.25■□□□□ 0.03
TRIOBP-211ENST00000492485 GDPD2Q9HCC8 539 aa15.25■□□□□ 0.03
TRIOBP-211ENST00000492485 SSFA2P28290 1259 aa15.25■□□□□ 0.03
TRIOBP-211ENST00000492485 NEK4P51957 841 aa15.25■□□□□ 0.03
TRIOBP-211ENST00000492485 PTPRGP23470 1445 aa15.25■□□□□ 0.03
TRIOBP-211ENST00000492485 TULP1O00294 542 aaPredicted RBP15.25■□□□□ 0.03
TRIOBP-211ENST00000492485 ST18O60284 1047 aa15.25■□□□□ 0.03
TRIOBP-211ENST00000492485 NCAPD3P42695 1498 aa15.25■□□□□ 0.03
TRIOBP-211ENST00000492485 TERF2IPQ9NYB0 399 aa15.24■□□□□ 0.03
TRIOBP-211ENST00000492485 MAP3K1Q13233 1512 aa15.24■□□□□ 0.03
TRIOBP-211ENST00000492485 DHX29Q7Z478 1369 aaKnown RBP15.24■□□□□ 0.03
TRIOBP-211ENST00000492485 PDE3AQ14432 1141 aa15.24■□□□□ 0.03
TRIOBP-211ENST00000492485 XPCQ01831 940 aaPredicted RBP15.24■□□□□ 0.03
TRIOBP-211ENST00000492485 ZRSR1Q15695 479 aaKnown RBP15.24■□□□□ 0.03
TRIOBP-211ENST00000492485 MVPQ14764 893 aaKnown RBP15.23■□□□□ 0.03
TRIOBP-211ENST00000492485 NPHP1O15259 732 aa15.23■□□□□ 0.03
TRIOBP-211ENST00000492485 PTPN23Q9H3S7 1636 aa15.22■□□□□ 0.03
TRIOBP-211ENST00000492485 UPF3BQ9BZI7 483 aaKnown RBP15.22■□□□□ 0.03
TRIOBP-211ENST00000492485 ERBINQ96RT1 1412 aa15.22■□□□□ 0.03
TRIOBP-211ENST00000492485 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
TRIOBP-211ENST00000492485 MCCP23508 829 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms